Works matching DE "METHYLATION"

Results: 5000

Genome-Wide Identification and Evolutionary Analysis of m6A-Related Gene Family in Poplar Nanlin895.

Published in:

Plants (2223-7747), 2025, v. 14, n. 13, p. 2017, doi. 10.3390/plants14132017

By:

Li, Zeyu;
Liu, Rongxia;
Zhu, Mingqiang;
Zhang, Jinye;
Li, Zhoujin;
Huang, Kaixin;
Ren, Zehua;
Zhao, Yan;
Luo, Keming;
Song, Qin

Publication type:

Article

Transgenerational Epigenetic and Phenotypic Inheritance Across Five Generations in Sheep.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 13, p. 6412, doi. 10.3390/ijms26136412

By:

Kizilaslan, Mehmet;
Braz, Camila U.;
Townsend, Jessica;
Taylor, Todd;
Crenshaw, Thomas D.;
Khatib, Hasan

Publication type:

Article

TGFB2 Expression and Methylation Predict Overall Survival in Pancreatic Ductal Adenocarcinoma Patients.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 13, p. 6357, doi. 10.3390/ijms26136357

By:

Saif, Muhammad Wasif;
Chang, Wen-Han;
Myers, Scott;
Potts, Michael;
Qazi, Sanjive;
Trieu, Vuong

Publication type:

Article

Advances in Traditional Chinese Medicine for Modulating DNA Methylation in the Treatment of Inflammatory Diseases.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 13, p. 6331, doi. 10.3390/ijms26136331

By:

Zhang, Cui;
Lio, Chonkit;
Li, Nana;
Huang, Cong;
Yao, Xueming;
Luo, Jinfang

Publication type:

Article

METTL21A promotes hepatocellular carcinoma progression via methylating and stabilizing BAG3.

Published in:

NPJ Precision Oncology, 2025, v. 9, n. 1, p. 1, doi. 10.1038/s41698-025-01021-5

By:

Zhan, Ping;
Cheng, Yizhe;
Wu, Yingcan;
Lu, Jing;
Wen, Jing;
Chi, Xiaoqin;
Luo, Changhong;
Peng, Yiwei;
Chen, Xijun;
Wang, Fuqiang;
Yin, Zhenyu;
Xie, Chengrong

Publication type:

Article

Synthesis, modification and biological activity of 2,3-indoles of Glycyrrhetinic acid.

Published in:

Natural Product Research, 2025, v. 39, n. 14, p. 3991, doi. 10.1080/14786419.2024.2326844

By:

Baltina, Lidia;
Karimova, Elza;
Nugumanov, Timur;
Petrova, Svetlana;
Gabdrakhmanova, Svetlana;
Khisamutdinova, Regina

Publication type:

Article

Nasopharyngeal carcinoma detected noninvasively in the real world using three gene methylation analyses from automatically processed bilateral nasal swab samples.

Published in:

BMC Cancer, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12885-025-14508-y

By:

Qin, Zi-Han;
Chen, Si-Yuan;
Zhou, Shuai;
Deng, Hua;
Li, Lan-Xi;
Guo, Qi-Lun;
Zou, Xiong;
Huang, Pei-Yu;
Chen, Ming-Yuan;
Zhang, Liang;
Hua, Yi-Jun

Publication type:

Article

Selective Organocatalytic Synthesis of 3‐Methylindoles and Diindolylmethanes through Reductive Methylation of Indoles with CO<sub>2</sub>.

Published in:

ChemSusChem, 2025, v. 18, n. 13, p. 1, doi. 10.1002/cssc.202500594

By:

Zhang, He;
Wu, Rongpei;
Gao, Ke

Publication type:

Article

Genome‐wide DNA methylation profiles in the raphe nuclei of patients with autism spectrum disorder.

Published in:

Psychiatry & Clinical Neurosciences, 2025, v. 79, n. 7, p. 415, doi. 10.1111/pcn.13830

By:

Iwata, Keiko;
Nakabayashi, Kazuhiko;
Ishiwata, Keisuke;
Nakamura, Kazuhiko;
Kameno, Yosuke;
Hata, Kenichiro;
Matsuzaki, Hideo

Publication type:

Article

The occurrence of changes in mitochondrial tRNA-Leu (UUR) gene and its methylation profil in dogs with malignant tumours.

Published in:

Animal Science Papers & Reports, 2025, v. 43, n. 2, p. 225, doi. 10.2478/aspr-2025-0016

By:

Ziółkowska, Kaja;
Lasota, Klaudia;
Kowal, Krzysztof;
Tkaczyk-Wlizło, Angelika;
Ślaska, Brygida

Publication type:

Article

The anticancer potential of Origanum onites L. in gastric cancer through epigenetic alterations.

Published in:

BMC Complementary Medicine & Therapies, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12906-025-04942-7

By:

Sogutlu, Fatma;
Pekerbas, Mert;
Boztas, Gulsum;
Bayram, Emine;
Pariltay, Erhan;
Cogulu, Ozgur;
Biray Avci, Cigir

Publication type:

Article

Oligosarcoma uniformly exhibits a HOX gene family hypermethylation signature.

Published in:

2025

By:

Ha, Vinny;
Nuechterlein, Nicholas;
Rivers, Mia;
Pratt, Drew;
Cimino, Patrick J.

Publication type:

Letter

Evolutionary Dynamics of Plant TRM6/TRM61 Complexes.

Published in:

Plants (2223-7747), 2025, v. 14, n. 12, p. 1778, doi. 10.3390/plants14121778

By:

Yue, Wenjie;
Chen, Tong;
Liu, Shuyi;
Shi, Xiaowen

Publication type:

Article

RUNX3 Methylation: An Epigenetic Biomarker for Early Liver Damage Induced by Co-Exposure to Aflatoxin B1 and Hepatitis B Virus.

Published in:

Toxics, 2025, v. 13, n. 6, p. 425, doi. 10.3390/toxics13060425

By:

Mo, Yunying;
Lu, Xiaodan;
Zheng, Shixiong;
Deng, Junfeng;
Huang, Shihan;
Hong, Ye;
Xian, Xiaoyu;
Yijiati, Aliya;
Yu, Xingyu;
Luo, Xunwu;
Xiao, Miner;
Yang, Xingfen;
Routledge, Michael N.;
Gong, Yunyun;
He, Zhini

Publication type:

Article

The Variability of the Essential Oil Composition of Wild Ledum palustre L. Shoots During Vegetation Period.

Published in:: Journal of Essential Oil Research, 2011, v. 23, n. 1, p. 9, doi. 10.1080/10412905.2011.9700423
Publication type:: Article

Composition and Antibacterial Activity of the Essential Oil of a Green Type and a Purple Type of Ocimum basilicum L. from Iran.

Published in:: Journal of Essential Oil Research, 2011, v. 23, n. 1, p. 1, doi. 10.1080/10412905.2011.9700421
Publication type:: Article

Playing the 'Next-Generation Game'.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 2, p. 74, doi. 10.1038/nrmicro2956

By:

Seth-Smith, Helena

Publication type:

Article

Immune evasion: Gm18, a bacterial 'invisibility cloak'.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 4, p. 238, doi. 10.1038/nrmicro2767

By:

David, Rachel

Publication type:

Article

Systematic Dissection of Roles for Chromatin Regulators in a Yeast Stress Response.

Published in:

PLoS Biology, 2012, v. 10, n. 7, p. 1, doi. 10.1371/journal.pbio.1001369

By:

Weiner, Assaf;
Chen, Hsiuyi V.;
Chih Long Liu;
Rahat, Ayelet;
Klien, Avital;
Soares, Luis;
Gudipati, Mohanram;
Pfeffner, Jenna;
Regev, Aviv;
Buratowski, Stephen;
Pleiss, Jeffrey A.;
Friedman, Nir;
Rando, Oliver J.

Publication type:

Article

A User's Guide to the Encyclopedia of DNA Elements (ENCODE).

Published in:: PLoS Biology, 2011, v. 9, n. 4, p. 1, doi. 10.1371/journal.pbio.1001046
Publication type:: Article

The DNA Methylome of Human Peripheral Blood Mononuclear Cells.

Published in:

PLoS Biology, 2010, v. 8, n. 11, p. 1, doi. 10.1371/journal.pbio.1000533

By:

Yingrui Li;
Jingde Zhu;
Geng Tian;
Ning Li;
Qibin Li;
Mingzhi Ye;
Hancheng Zheng;
Jian Yu;
Honglong Wu;
Jihua Sun;
Hongyu Zhang;
Quan Chen;
Ruibang Luo;
Minfeng Chen;
Yinghua He;
Xin Jin;
Qinghui Zhang;
Chang Yu;
Guangyu Zhou;
Jinfeng Sun

Publication type:

Article

Epigenetics of Royalty.

Published in:

PLoS Biology, 2010, v. 8, n. 11, p. 1, doi. 10.1371/journal.pbio.1000532

By:

Chittka, Alexandra;
Chittka, Lars

Publication type:

Article

The Honey Bee Epigenomes: Differential Methylation of Brain DNA in Queens and Workers.

Published in:

PLoS Biology, 2010, v. 8, n. 11, p. 1, doi. 10.1371/journal.pbio.1000506

By:

Lyko, Frank;
Foret, Sylvain;
Kucharski, Robert;
Wolf, Stephan;
Falckenhayn, Cassandra;
Maleszka, Ryszard

Publication type:

Article

We All Gotta Go Sometime.

Published in:

PLoS Biology, 2010, v. 8, n. 8, p. 1, doi. 10.1371/journal.pbio.1000455

By:

Meadows, Robin

Publication type:

Article

Misguided Transcriptional Elongation Causes Mixed Lineage Leukemia.

Published in:

PLoS Biology, 2009, v. 7, n. 11, p. 1, doi. 10.1371/journal.pbio.1000249

By:

Mueller, Dorothee;
García-Cuéllar, María-Paz;
Bach, Christian;
Buhl, Sebastian;
Maethner, Emanuel;
Slany, Robert K.

Publication type:

Article

PcG Proteins, DNA Methylation, and Gene Repression by Chromatin Looping.

Published in:

PLoS Biology, 2008, v. 6, n. 12, p. e306, doi. 10.1371/journal.pbio.0060306

By:

Tiwari, Vijay K.;
McGarvey, Kelly M.;
Licchesi, Julien D. F.;
Ohm, Joyce E.;
Herman, James G.;
Schbeler, Dirk;
Baylin, Stephen B.

Publication type:

Article

BEAF Regulates Cell-Cycle Genes through the Controlled Deposition of H3K9 Methylation Marks into Its Conserved Dual-Core Binding Sites.

Published in:

PLoS Biology, 2008, v. 6, n. 12, p. e327, doi. 10.1371/journal.pbio.0060327

By:

Emberly, Eldon;
Blattes, Roxane;
Schuettengruber, Bernd;
Hennion, Magali;
Nan Jiang;
Hart, Craig M.;
Käs, Emmanuel;
Cuvier, Olivier

Publication type:

Article

Retinoblastoma and Its Binding Partner MSI1 Control Imprinting in Arabidopsis.

Published in:

PLoS Biology, 2008, v. 6, n. 8, p. e194, doi. 10.1371/journal.pbio.0060194

By:

Jullien, Pauline E.;
Mosquna, Assaf;
Ingouff, Mathieu;
Sakata, Tadashi;
Ohad, Nir;
Berger, Frédéric

Publication type:

Article

Antigenic Variation in Trypanosoma brucei: Joining the DOTs.

Published in:

PLoS Biology, 2008, v. 6, n. 7, p. e185, doi. 10.1371/journal.pbio.0060185

By:

Stockdale, Chris;
Swiderski, Michal R.;
Barry, J. David;
McCulloch, Richard

Publication type:

Article

A Novel CpG Island Set Identifies Tissue-Specific Methylation at Developmental Gene Loci.

Published in:

PLoS Biology, 2008, v. 6, n. 1, p. e22, doi. 10.1371/journal.pbio.0060022

By:

Illingworth, Robert;
Kerr, Alastair;
DeSousa, Dina;
Jrgensen, Helle;
Ellis, Peter;
Stalker, Jim;
Jackson, David;
Clee, Chris;
Plumb, Robert;
Rogers, Jane;
Humphray, Sean;
Cox, Tony;
Langford, Cordelia;
Bird, Adrian

Publication type:

Article

Whole-Genome Analysis of Histone H3 Lysine 27 Trimethylation in Arabidopsis.

Published in:

PLoS Biology, 2007, v. 5, n. 5, p. e129, doi. 10.1371/journal.pbio.0050129

By:

Xiaoyu Zhang;
Clarenz, Oliver;
Cokus, Shawn;
Bernatavichute, Yana V;
Pellegrini, Matteo;
Goodrich, Justin;
Jacobsen, Steven E.

Publication type:

Article

Two-Step Recruitment of RNA-Directed DNA Methylation to Tandem Repeats.

Published in:

PLoS Biology, 2006, v. 4, n. 11, p. 1923, doi. 10.1371/journal.pbio.0040363

By:

Chan, Simon W.-L.;
Xiaoyu Zhang;
Bernatavichute, Yana V.;
Jacobsen, Steven E.

Publication type:

Article

The Testis-Specific Factor CTCFL Cooperates with the Protein Methyltransferase PRMT7 in H19 Imprinting Control Region Methylation.

Published in:

PLoS Biology, 2006, v. 4, n. 11, p. 1910, doi. 10.1371/journal.pbio.0040355

By:

Jelinic, Petar;
Stehle, Jean-Christophe;
Shaw, Phillip

Publication type:

Article

New Factors Controlling Parent-Specific Genetic Control.

Published in:

PLoS Biology, 2006, v. 4, n. 11, p. 1883, doi. 10.1371/journal.pbio.0040398

By:

Underwood, Jason

Publication type:

Article

siRNAs and DNA Methylation Do a Two-Step to Silence Tandem Sequences.

Published in:

PLoS Biology, 2006, v. 4, n. 11, p. 1879, doi. 10.1371/journal.pbio.0040407

By:

Robinson, Richard

Publication type:

Article

Dynamic Acetylation of All Lysine 4-Methylated Histone H3 in the Mouse Nucleus: Analysis at c-fos and c-jun.

Published in:

PLoS Biology, 2005, v. 3, n. 12, p. e393, doi. 10.1371/journal.pbio.0030393

By:

Hazzalin, Catherine A.;
Mahadevan, Louis C.

Publication type:

Article

Sorghum Genome Sequencing by Methylation Filtration.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030013

By:

Bedell, Joseph A;
Budiman, Muhammad A;
Nunberg, Andrew;
Citek, Robert W;
Robbins, Dan;
Jones, Joshua;
Flick, Elizabeth;
Rohlfing, Theresa;
Fries, Jason;
Bradford, Kourtney;
McMenamy, Jennifer;
Smith, Michael;
Holeman, Heather;
Roe, Bruce A;
Wiley, Graham;
Korf, Ian F;
Rabinowicz, Pablo D;
Lakey, Nathan;
McCombie, W. Richard;
Jeddeloh, Jeffrey A

Publication type:

Article

Sorghum Genome Sequencing by Methylation Filtration.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 103, doi. 10.1371/journal.pbio.0030013

By:

Bedell, Joseph A.;
Budiman, Muhammad A.;
Nunberg, Andrew;
Citek, Robert W.;
Robbins, Dan;
Jones, Joshua;
Flick, Elizabeth;
Rohlfing, Theresa;
Fries, Jason;
Bradford, Kourtney;
McMenamy, Jennifer;
Smith, Michael;
Holeman, Heather;
Roe, Bruce A.;
Wiley, Graham;
Korf, Ian F.;
Rabinowicz, Pablo D.;
Lakey, Nathan;
McCombie, W. Richard;
Jeddeloh, Jeffrey A.

Publication type:

Article

Separating Wheat from Chaff in Plant Genomes.

Published in:: PLoS Biology, 2005, v. 3, n. 1, p. 6, doi. 10.1371/journal.pbio.0030039
Publication type:: Article

DNA Methylation Profiling of the Human Major Histocompatibility Complex: A Pilot Study for the Human Epigenome Project.

Published in:

PLoS Biology, 2004, v. 2, n. 12, p. 2170, doi. 10.1371/journal.pbio.0020405

By:

Rakyan, Vardhman K.;
Hildmann, Thomas;
Novik, Karen L.;
Lewin, Jörn;
Tost, Jörg;
Cox, Antony V.;
Andrews, T. Dan;
Howe, Kevin L.;
Otto, Thomas;
Olek, Alexander;
Fischer, Judith;
Gut, Ivo G.;
Berlin, Kurt;
Beck, Stephan

Publication type:

Article

A Chromosomal Memory Triggered by Xist Regulates Histone Methylation in X Inactivation.

Published in:

PLoS Biology, 2004, v. 2, n. 7, p. 991, doi. 10.1371/journal.pbio.0020171

By:

Kohlmaier, Alexander;
Savarese, Fabio;
Lachner, Monika;
Martens, Joost;
Jenuwein, Thomas;
Wutz, Anton

Publication type:

Article

Distinct Mechanisms Determine Transposon Inheritance and Methylation via Small Interfering RNA and Histone Modification.

Published in:

PLoS Biology, 2003, v. 1, n. 12, p. 1, doi. 10.1371/journal.pbio.0000067

By:

Lippman, Zachary;
May, Bruce;
Yordan, Cristy;
Singer, Tatjana;
Martienssen, Rob

Publication type:

Article

Distinct Mechanisms Determine Transposon Inheritance and Methylation via Small Interfering RNA and Histone Modification.

Published in:

PLoS Biology, 2003, v. 1, n. 3, p. 420, doi. 10.1371/journal.pbio.0000067

By:

Lippman, Zachary;
May, Bruce;
Yordan, Cristy;
Singer, Tatjana;
Martienssen, Rob

Publication type:

Article

Hepatitis B virus X protein promotes P3 transcript expression of the insulin-like growth factor 2 gene via inducing hypomethylation of P3 promoter in hepatocellular carcinoma.

Published in:

Liver International, 2015, v. 35, n. 2, p. 608, doi. 10.1111/liv.12469

By:

Tang, Shaohui;
Hu, Wei;
Hu, Jianjun;
Wu, Shenglan;
Li, Junfeng;
Luo, Yuhong;
Cao, Mingrong;
Zhou, Hongke;
Jiang, Xiangwu

Publication type:

Article

Epigenetic Repression of miR-129-2 in Cancer.

Published in:

Liver International, 2014, v. 34, n. 4, p. 646, doi. 10.1111/liv.12367

By:

He, Yong;
Huang, Cheng;
Zhang, Lei;
Li, Jun

Publication type:

Article

Hypomethylation of long interspersed nuclear element-1 promoter is associated with poor outcomes for curative resected hepatocellular carcinoma.

Published in:

Liver International, 2014, v. 34, n. 1, p. 136, doi. 10.1111/liv.12264

By:

Gao, Xu‐dong;
Qu, Jian‐hui;
Chang, Xiu‐juan;
Lu, Yin‐ying;
Bai, Wen‐lin;
Wang, Hong;
Xu, Zhong‐xian;
An, Lin‐jing;
Wang, Chun‐ping;
Zeng, Zhen;
Yang, Yong‐ping

Publication type:

Article

Methylation-mediated repression of micro RNA 129-2 enhances oncogenic SOX4 expression in HCC.

Published in:

Liver International, 2013, v. 33, n. 3, p. 476, doi. 10.1111/liv.12097

By:

Chen, Xiangmei;
Zhang, Ling;
Zhang, Ting;
Hao, Meili;
Zhang, Xiaolei;
Zhang, Jiangbo;
Xie, Qing;
Wang, Yongfeng;
Guo, Mingzhou;
Zhuang, Hui;
Lu, Fengmin

Publication type:

Article

Quantitative methylation analysis reveals gender and age differences in p16 INK4a hypermethylation in hepatitis B virus-related hepatocellular carcinoma.

Published in:

Liver International, 2012, v. 32, n. 3, p. 420, doi. 10.1111/j.1478-3231.2011.02696.x

By:

Wang, Yongfeng;
Cheng, Jin;
Xu, Chunhui;
Liu, Shuang;
Jiang, Suzhen;
Xu, Qiang;
Chen, Xiangmei;
Zhuang, Hui;
Lu, Fengmin

Publication type:

Article

Methylation status of p14ARF, p15INK4b, and p16INK4a genes in human hepatocellular carcinoma.

Published in:

Liver International, 2005, v. 25, n. 6, p. 1209, doi. 10.1111/j.1478-3231.2005.01162.x

By:

Fukai, Kenichi;
Yokosuka, Osamu;
Imazeki, Fumio;
Tada, Motohisa;
Mikata, Rintaro;
Miyazaki, Masaru;
Ochiai, Takenori;
Saisho, Hiromitsu

Publication type:

Article

No association between GSTP1 gene aberrant promoter methylation and prognosis in surgically resected hepatocellular carcinoma patients from the Basque Country (Northern Spain).

Published in:

Liver International, 2003, v. 23, n. 4, p. 249, doi. 10.1034/j.1600-0676.2003.00834.x

By:

Anzola, Monica;
Cuevas, Nerea;
López-Martínez, Monica;
Saiz, Alberto;
Burgos, Juan José;
Pancorbo, Marian Martínez de

Publication type:

Article