Works matching AU Amann, Rudolf

Results: 154

Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 9, p. 635, doi. 10.1038/nrmicro3330

By:

Yarza, Pablo;
Yilmaz, Pelin;
Pruesse, Elmar;
Glöckner, Frank Oliver;
Ludwig, Wolfgang;
Schleifer, Karl-Heinz;
Whitman, William B.;
Euzéby, Jean;
Amann, Rudolf;
Rosselló-Móra, Ramon

Publication type:

Article

Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains.

Published in:

PLoS Biology, 2014, v. 12, n. 8, p. 1, doi. 10.1371/journal.pbio.1001920

By:

Kyrpides, Nikos C.;
Hugenholtz, Philip;
Eisen, Jonathan A.;
Woyke, Tanja;
Göker, Markus;
Parker, Charles T.;
Amann, Rudolf;
Beck, Brian J.;
Chain, Patrick S. G.;
Chun, Jongsik;
Colwell, Rita R.;
Danchin, Antoine;
Dawyndt, Peter;
Dedeurwaerdere, Tom;
DeLong, Edward F.;
Detter, John C.;
De Vos, Paul;
Donohue, Timothy J.;
Dong, Xiu-Zhu;
Ehrlich, Dusko S.

Publication type:

Article

Insights into the Genome of Large Sulfur Bacteria Revealed by Analysis of Single Filaments.

Published in:

PLoS Biology, 2007, v. 5, n. 9, p. e230, doi. 10.1371/journal.pbio.0050230

By:

Mußmann, Marc;
Hu, Fen Z.;
Richter, Michael;
de Beer, Dirk;
Preisler, André;
Jørgensen, Bo B.;
Huntemann, Marcel;
Glöckner, Frank Oliver;
Amann, Rudolf;
Koopman, Werner J. H.;
Lasken, Roger S.;
Janto, Benjamin;
Hogg, Justin;
Stoodley, Paul;
Boissy, Robert;
Ehrlich, Garth D.

Publication type:

Article

North Sea spring bloom-associated Gammaproteobacteria fill diverse heterotrophic niches.

Published in:

Environmental Microbiome, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s40793-021-00385-y

By:

Francis, Ben;
Urich, Tim;
Mikolasch, Annett;
Teeling, Hanno;
Amann, Rudolf

Publication type:

Article

IDENTIFICATION OF THE CLASS PRYMNESIOPHYCEAE AND THE GENUS PHAEOCYSTIS WITH RIBOSOMAL RNA-TARGETED NUCLEIC ACID PROBES DETECTED BY FLOW CYTOMETRY.

Published in:

Journal of Phycology, 1996, v. 32, n. 5, p. 858, doi. 10.1111/j.0022-3646.1996.00858.x

By:

Lange, Martin;
Guillou, Laure;
Vaulot, Daniel;
Simon, Nathalie;
Amann, Rudolf I.;
Ludwig, Wolfgang;
Medlin, Linda K.

Publication type:

Article

Complete genome sequence of Desulfocapsa sulfexigens, a marine deltaproteobacterium specialized in disproportionating inorganic sulfur compounds.

Published in:

Standards in Genomic Sciences, 2013, v. 8, n. 1, p. 58, doi. 10.4056/sigs.3777412

By:

Finster, Kai;
Kjeldsen, Kasper;
Kube, Michael;
Reinhardt, Richard;
Mussmann, Marc;
Amann, Rudolf;
Schreiber, Lars

Publication type:

Article

Author Correction: Seasonal recurrence and modular assembly of an Arctic pelagic marine microbiome.

Published in:

2025

By:

Priest, Taylor;
Oldenburg, Ellen;
Popa, Ovidiu;
Dede, Bledina;
Metfies, Katja;
von Appen, Wilken-Jon;
Torres-Valdés, Sinhué;
Bienhold, Christina;
Fuchs, Bernhard M.;
Amann, Rudolf;
Boetius, Antje;
Wietz, Matthias

Publication type:

Correction Notice

Seasonal recurrence and modular assembly of an Arctic pelagic marine microbiome.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56203-3

By:

Priest, Taylor;
Oldenburg, Ellen;
Popa, Ovidiu;
Dede, Bledina;
Metfies, Katja;
von Appen, Wilken-Jon;
Torres-Valdés, Sinhué;
Bienhold, Christina;
Fuchs, Bernhard M.;
Amann, Rudolf;
Boetius, Antje;
Wietz, Matthias

Publication type:

Article

Microbial species and intraspecies units exist and are maintained by ecological cohesiveness coupled to high homologous recombination.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-53787-0

By:

Conrad, Roth E.;
Brink, Catherine E.;
Viver, Tomeu;
Rodriguez-R, Luis M.;
Aldeguer-Riquelme, Borja;
Hatt, Janet K.;
Venter, Stephanus N.;
Rossello-Mora, Ramon;
Amann, Rudolf;
Konstantinidis, Konstantinos T.

Publication type:

Article

Activity, Distribution, and Diversity of Sulfate Reducers and Other Bacteria in Sediments above Gas Hydrate (Cascadia Margin, Oregon).

Published in:

Geomicrobiology Journal, 2003, v. 20, n. 4, p. 269, doi. 10.1080/01490450303896

By:

Knittel, Katrin;
Boetius, Antje;
Lemke, Andreas;
Eilers, Heike;
Lochte, Karin;
Pfannkuche, Olaf;
Linke, Peter;
Amann, Rudolf

Publication type:

Article

Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques.

Published in:

Nature Reviews Microbiology, 2008, v. 6, n. 5, p. 339, doi. 10.1038/nrmicro1888

By:

Amann, Rudolf;
Fuchs, Bernhard M.

Publication type:

Article

Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1T.

Published in:

Proteomics, 2008, v. 8, n. 8, p. 1608, doi. 10.1002/pmic.200701017

By:

Hieu, Cao Xuan;
Voigt, Birgit;
Albrecht, Dirk;
Becher, Dörte;
Lombardot, Thierry;
Glöckner, Frank Oliver;
Amann, Rudolf;
Hecker, Michael;
Schweder, Thomas

Publication type:

Article

Towards the proteome of the marine bacterium Rhodopirellula baltica: Mapping the soluble proteins.

Published in:

Proteomics, 2005, v. 5, n. 14, p. 3654, doi. 10.1002/pmic.200401201

By:

Dörte Gade;
Dorothea Theiss;
Daniela Lange;
Ekaterina Mirgorodskaya;
Thierry Lombardot;
Frank Oliver Glöckner;
Michael Kube;
Richard Reinhardt;
Rudolf Amann;
Hans Lehrach;
Ralf Rabus;
Johan Gobom

Publication type:

Article

Analysis of N-acetylglucosamine metabolism in the marine bacterium Pirellula sp. strain 1 by a proteomic approach.

Published in:

Proteomics, 2002, v. 2, n. 6, p. 649, doi. 10.1002/1615-9861(200206)2:6<649::AID-PROT649>3.0.CO;2-R

By:

Rabus, Ralf;
Gade, Dörte;
Helbig, Roger;
Bauer, Margarete;
Glöckner, Frank Oliver;
Kube, Michael;
Schlesner, Heinz;
Reinhardt, Richard;
Amann, Rudolf

Publication type:

Article

Archaea-Like Genes for C1-Transfer EnzymesinPlanctomycetes: Phylogenetic Implications of Their Unexpected Presence in This Phylum.

Published in:

Journal of Molecular Evolution, 2004, v. 59, n. 5, p. 571, doi. 10.1007/s00239-004-2643-6

By:

Bauer, Margarete;
Lombardot, Thierry;
Teeling, Hanno;
Ward, Naomi L.;
Amann, Rudolf I.;
Gl&oumlckner, Frank O.

Publication type:

Article

Intraspecific comparative analysis of the speciesSalinibacter ruber.

Published in:

Extremophiles, 2005, v. 9, n. 2, p. 151, doi. 10.1007/s00792-005-0430-y

By:

Peña, Arantxa;
Valens, Maria;
Santos, Fernando;
Buczolits, Sandra;
Antón, Josefa;
Kämpfer, Peter;
Busse, Hans-Jürgen;
Amann, Rudolf;
Rosselló-Mora, Ramon

Publication type:

Article

Direct proof for the presence and expression of two 5% different 16S rRNA genes in individual cells of Haloarcula marismortui.

Published in:

Extremophiles, 2000, v. 4, n. 6, p. 373, doi. 10.1007/s007920070007

By:

Amann, Gudrun;
Stetter, K. O.;
Llobet-Brossa, Enric;
Amann, Rudolf;
Antón, Josefa

Publication type:

Article

Detoxification of sulphidic African shelf waters by blooming chemolithotrophs.

Published in:

Nature, 2009, v. 457, n. 7229, p. 581, doi. 10.1038/nature07588

By:

Lavik, Gaute;
Stührmann, Torben;
Brüchert, Volker;
Van der Plas, Anja;
Mohrholz, Volker;
Lam, Phyllis;
Mußmann, Marc;
Fuchs, Bernhard M.;
Amann, Rudolf;
Lass, Ulrich;
Kuypers, Marcel M. M.

Publication type:

Article

Symbiosis insights through metagenomic analysis of a microbial consortium.

Published in:

Nature, 2006, v. 443, n. 7114, p. 950, doi. 10.1038/nature05192

By:

Woyke, Tanja;
Teeling, Hanno;
Ivanova, Natalia N.;
Huntemann, Marcel;
Richter, Michael;
Gloeckner, Frank Oliver;
Boffelli, Dario;
Anderson, Iain J.;
Barry, Kerrie W.;
Shapiro, Harris J.;
Szeto, Ernest;
Kyrpides, Nikos C.;
Mussmann, Marc;
Amann, Rudolf;
Bergin, Claudia;
Ruehland, Caroline;
Rubin, Edward M.;
Dubilier, Nicole

Publication type:

Article

Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink.

Published in:

2006

By:

Niemann, Helge;
Lösekann, Tina;
de Beer, Dirk;
Elvert, Marcus;
Nadalig, Thierry;
Knittel, Katrin;
Amann, Rudolf;
Sauter, Eberhard J.;
Schlüter, Michael;
Klages, Michael;
Foucher, Jean Paul;
Boetius, Antje

Publication type:

Letter

A conspicuous nickel protein in microbial mats that oxidize methane anaerobically.

Published in:

Nature, 2003, v. 426, n. 6968, p. 878, doi. 10.1038/nature02207

By:

Krüger, Martin;
Meyerdierks, Anke;
Glöckner, Frank Oliver;
Amann, Rudolf;
Widdel, Friedrich;
Kube, Michael;
Reinhardt, Richard;
Kahnt, Jörg;
Böcher, Reinhard;
Thauer, Rudolf K.;
Shima, Seigo

Publication type:

Article

Selfish bacteria are active throughout the water column of the ocean.

Published in:

ISME Communications, 2023, v. 3, n. 1, p. 1, doi. 10.1038/s43705-023-00219-7

By:

Giljan, Greta;
Brown, Sarah;
Lloyd, C Chad;
Ghobrial, Sherif;
Amann, Rudolf;
Arnosti, Carol

Publication type:

Article

RRNA based identification and detection systems for rhizobia and other bacteria.

Published in:

Plant & Soil, 1998, v. 204, n. 1, p. 1, doi. 10.1023/A:1004350708767

By:

Ludwig, Wolfgang;
Amann, Rudolf;
Martinez-Romero, Esperanza;
Schönhuber, Wilhelm;
Bauer, Stephan;
Neef, Alexander;
Schleifer, Karl-Heinz

Publication type:

Article

Insights into the genomes of archaea mediating the anaerobic oxidation of methane.

Published in:

Environmental Microbiology, 2005, v. 7, n. 12, p. 1937, doi. 10.1111/j.1462-2920.2005.00844.x

By:

Meyerdierks, Anke;
Kube, Michael;
Lombardot, Thierry;
Knittel, Katrin;
Bauer, Margarete;
Glöckner, Frank Oliver;
Reinhardt, Richard;
Amann, Rudolf

Publication type:

Article

In situ substrate conversion and assimilation by nitrifying bacteria in a model biofilm.

Published in:

Environmental Microbiology, 2005, v. 7, n. 9, p. 1392, doi. 10.1111/j.1462-2920.2005.00826.x

By:

Gieseke, Armin;
Nielsen, Jeppe Lund;
Amann, Rudolf;
Nielsen, Per Halkjær;
de Beer, Dirk

Publication type:

Article

Diversity and vertical distribution of cultured and unculturedDeltaproteobacteriain an intertidal mud flat of the Wadden Sea.

Published in:

Environmental Microbiology, 2005, v. 7, n. 3, p. 405, doi. 10.1111/j.1462-2920.2005.00708.x

By:

Mußmann, Marc;
Ishii, Kousuke;
Rabus, Raif;
Amann, Rudolf

Publication type:

Article

Application of tetranucleotide frequencies for the assignment of genomic fragments.

Published in:

Environmental Microbiology, 2004, v. 6, n. 9, p. 938, doi. 10.1111/j.1462-2920.2004.00624.x

By:

Teeling, Hanno;
Meyerdierks, Anke;
Bauer, Margarete;
Amann, Rudolf;
Glöcknerl, Frank Oliver

Publication type:

Article

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

Published in:

Environmental Microbiology, 2004, v. 6, n. 6, p. 638, doi. 10.1111/j.1462-2920.2004.00588.x

By:

Peplies, Jörg;
Lau, Stanley Chun Kwan;
Pernthaler, Jakob;
Amann, Rudolf;
Glöckner, Frank Oliver

Publication type:

Article

Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages.

Published in:

Environmental Microbiology, 2004, v. 6, n. 3, p. 242, doi. 10.1111/j.1462-2920.2004.00561.x

By:

Warnecke, Falk;
Amann, Rudolf;
Pernthaler, Jakob

Publication type:

Article

In situ distribution and activity of nitrifying bacteria in freshwater sediment.

Published in:

Environmental Microbiology, 2003, v. 5, n. 9, p. 798, doi. 10.1046/j.1469-2920.2003.00469.x

By:

Altmann, Dörte;
Stief, Peter;
Amann, Rudolf;
de Beer, Dirk;
Schramm, Andreas

Publication type:

Article

Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR.

Published in:

Environmental Microbiology, 2003, v. 5, n. 8, p. 660, doi. 10.1046/j.1462-2920.2003.00452.x

By:

Neretin, Lev N.;
Schippers, Axel;
Pernthaler, Annelie;
Hamann, Knut;
Amann, Rudolf;
Jørgensen, Bo Barker

Publication type:

Article

Phylogeny and distribution of nitrate-storing Beggiatoa spp. in coastal marine sediments.

Published in:

Environmental Microbiology, 2003, v. 5, n. 6, p. 523, doi. 10.1046/j.1462-2920.2003.00440.x

By:

Mußmann, Marc;
Schulz, Heide N.;
Strotmann, Bettina;
Kjær, Thomas;
Nielsen, Lars P.;
Rosselló-Mora, Ramon A.;
Amann, Rudolf I.;
Jørgensen, Bo Barker

Publication type:

Article

Structure and activity of multiple nitrifying bacterial populations co-existing in a biofilm.

Published in:

Environmental Microbiology, 2003, v. 5, n. 5, p. 355, doi. 10.1046/j.1462-2920.2003.00423.x

By:

Gieseke, Armin;
Bjerrum, Lotte;
Wagner, Michael;
Amann, Rudolf

Publication type:

Article

Isolation of small-subunit rRNA for stable isotopic characterization.

Published in:

Environmental Microbiology, 2002, v. 4, n. 8, p. 451, doi. 10.1046/j.1462-2920.2002.00324.x

By:

MacGregor, Barbara J.;
Brüchert, Volker;
Fleischer, Swantje;
Amann, Rudolf

Publication type:

Article

Picobenthic cyanobacterial populations revealed by 16S rRNA-targeted in situ hybridization.

Published in:

Environmental Microbiology, 2002, v. 4, n. 7, p. 375, doi. 10.1046/j.1462-2920.2002.00307.x

By:

Abed, Raeid M. M.;
Schönhuber, Wilhelm;
Amann, Rudolf;
Garcia-Pichel, Ferran

Publication type:

Article

Think big: the international dimension of environmental microbiology.

Published in:

Environmental Microbiology, 2002, v. 4, n. 1, p. 3, doi. 10.1046/j.1462-2920.2002.t01-6-00257.x

By:

Amann, Rudolf

Publication type:

Article

Linking the composition of bacterioplankton to rapid turnover of dissolved dimethylsulphoniopropionate in an algal bloom in the North Sea.

Published in:

Environmental Microbiology, 2001, v. 3, n. 5, p. 304, doi. 10.1046/j.1462-2920.2001.00196.x

By:

Zubkov, Mikhail V.;
Fuchs, Bernhard M.;
Archer, Stephen D.;
Kiene, Ronald P.;
Amann, Rudolf;
Burkill, Peter H.

Publication type:

Article

Microenvironments and distribution of nitrifying bacteria in a membrane-bound biofilm.

Published in:

Environmental Microbiology, 2000, v. 2, n. 6, p. 680, doi. 10.1046/j.1462-2920.2000.00150.x

By:

Schramm, Andreas;
De Beer, Dirk;
Gieseke, Armin;
Amann, Rudolf

Publication type:

Article

Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques.

Published in:

Environmental Microbiology, 2000, v. 2, n. 2, p. 191, doi. 10.1046/j.1462-2920.2000.00092.x

By:

Fuchs, Bernhard M.;
Zubkov, Mikhail V.;
Sahm, Kerstin;
Burkill, Peter H.;
Amann, Rudolf

Publication type:

Article

Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds.

Published in:

Environmental Microbiology, 1999, v. 1, n. 6, p. 517, doi. 10.1046/j.1462-2920.1999.00065.x

By:

Antón, Josefa;
Llobet-Brossa, Enric;
Rodríguez-Valera, Francisco;
Amann, Rudolf

Publication type:

Article

Book review.

Published in:

1999

By:

Amann, Rudolf

Publication type:

Book Review

Phylogeny and in situ identification of a morphologically conspicuous bacterium,Candidatus Magnospira bakii, present at very low frequency in activated sludge.

Published in:

Environmental Microbiology, 1999, v. 1, n. 2, p. 125, doi. 10.1046/j.1462-2920.1999.00012.x

By:

Snaidr, Jiri;
Fuchs, Bernhard;
Wallner, Günter;
Wagner, Michael;
Schleifer, Karl-Heinz;
Amann, Rudolf

Publication type:

Article

Utilization of tmRNA sequences for bacterial identification.

Published in:

BMC Microbiology, 2001, v. 1, p. 20, doi. 10.1186/1471-2180-1-20

By:

Schönhuber, Wilhelm;
Le Bourhis, Guenhael;
Tremblay, Josselyne;
Amann, Rudolf;
Kulakauskas, Saulius

Publication type:

Article

Tight Adherence (Tad) Pilus Genes Indicate Putative Niche Differentiation in Phytoplankton Bloom Associated Rhodobacterales.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.718297

By:

Isaac, Ashley;
Francis, Ben;
Amann, Rudolf I.;
Amin, Shady A.

Publication type:

Article

Particle Collection in Imhoff Sedimentation Cones Enriches Both Motile Chemotactic and Particle-Attached Bacteria.

Published in:

Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.643730

By:

Heins, Anneke;
Reintjes, Greta;
Amann, Rudolf I.;
Harder, Jens

Publication type:

Article

Extensive Microbial Processing of Polysaccharides in the South Pacific Gyre via Selfish Uptake and Extracellular Hydrolysis.

Published in:

Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.583158

By:

Reintjes, Greta;
Fuchs, Bernhard M.;
Amann, Rudolf;
Arnosti, Carol

Publication type:

Article

Distinct actors drive different mechanisms of biopolymer processing in polar marine coastal sediments.

Published in:

Environmental Microbiology, 2024, v. 26, n. 8, p. 1, doi. 10.1111/1462-2920.16687

By:

Knittel, Katrin;
Miksch, Sebastian;
Moncada, Chyrene;
Silva‐Solar, Sebastian;
Moye, Jannika;
Amann, Rudolf;
Arnosti, Carol

Publication type:

Article

Pulsed inputs of high molecular weight organic matter shift the mechanisms of substrate utilisation in marine bacterial communities.

Published in:

Environmental Microbiology, 2024, v. 26, n. 2, p. 1, doi. 10.1111/1462-2920.16580

By:

Brown, Sarah;
Lloyd, C. Chad;
Giljan, Greta;
Ghobrial, Sherif;
Amann, Rudolf;
Arnosti, Carol

Publication type:

Article

Strong seasonal differences of bacterial polysaccharide utilization in the North Sea over an annual cycle.

Published in:

Environmental Microbiology, 2022, v. 24, n. 5, p. 2333, doi. 10.1111/1462-2920.15997

By:

Giljan, Greta;
Arnosti, Carol;
Kirstein, Inga V.;
Amann, Rudolf;
Fuchs, Bernhard M.

Publication type:

Article

Diversity and biomass dynamics of unicellular marine fungi during a spring phytoplankton bloom.

Published in:

Environmental Microbiology, 2021, v. 23, n. 1, p. 448, doi. 10.1111/1462-2920.15331

By:

Priest, Taylor;
Fuchs, Bernhard;
Amann, Rudolf;
Reich, Marlis

Publication type:

Article