Works about PROTEOMICS

Results: 5000

Mitochondrial proteome landscape unveils key insights into melanoma severity and treatment strategies.

Published in:

Cancer (0008543X), 2025, v. 131, n. 13, p. 1, doi. 10.1002/cncr.35897

By:

Kim, Yonghyo;
Doma, Viktória;
Çakır, Uğur;
Kuras, Magdalena;
Betancourt, Lazaro Hiram;
Pla, Indira;
Sanchez, Aniel;
Sugihara, Yutaka;
Appelqvist, Roger;
Oskolas, Henriett;
Lee, Boram;
Guedes, Jéssica;
Monnerat, Gustavo;
Carneiro, Gabriel Reis Alves;
Nogueira, Fábio C. S.;
Domont, Gilberto B.;
Malm, Johan;
Baldetorp, Bo;
Wieslander, Elisabet;
Németh, István Balázs

Publication type:

Article

Proteomic risk scores for predicting common diseases using linear and neural network models in the UK biobank.

Published in:

2025

By:

Smith, Alexander;
Elliott, Paul;
Mayr, Manuel;
Dehghan, Abbas;
Tzoulaki, Ioanna

Publication type:

Abstract

Mitochondria and Endoplasmic Reticulum Contact Site as a Regulator of Proteostatic Stress Responses in Neurodegenerative Diseases.

Published in:

BioEssays, 2025, v. 47, n. 7, p. 1, doi. 10.1002/bies.70016

By:

Watanabe, Seiji;
Yamanaka, Koji

Publication type:

Article

Relationship between autoimmunity and COPD: an investigation based on proteomic profiling and antinuclear antibody screening.

Published in:

Journal of Immunoassay & Immunochemistry, 2025, v. 46, n. 4, p. 339, doi. 10.1080/15321819.2025.2502430

By:

Das, Sonu;
Adiody, Supriya;
Varghese, Jinsu;
John, Mathew

Publication type:

Article

Enrichment of extracellular vesicles using Mag-Net for the analysis of the plasma proteome.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-60595-7

By:

Wu, Christine C.;
Tsantilas, Kristine A.;
Park, Jea;
Plubell, Deanna;
Sanders, Justin A.;
Naicker, Previn;
Govender, Ireshyn;
Buthelezi, Sindisiwe;
Stoychev, Stoyan;
Jordaan, Justin;
Merrihew, Gennifer;
Huang, Eric;
Parker, Edward D.;
Riffle, Michael;
Hoofnagle, Andrew N.;
Noble, William S.;
Poston, Kathleen L.;
Montine, Thomas J.;
MacCoss, Michael J.

Publication type:

Article

Membrane proteome analysis identifies key components of sensing in Phytophthora parasitica zoospores.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-08701-z

By:

Lupatelli, C. A.;
Seassau, A.;
Magliano, M.;
Kuhn, M. L.;
Rey, A.;
Poët, M.;
Counillon, L.;
Evangelisti, E.;
Thomen, P.;
Attard, A.;
Noblin, X.;
Galiana, E.

Publication type:

Article

Age and gender differences in the urinary proteome of healthy subjects using the advantages of quantitative proteomics.

Published in:

Clinical & Experimental Nephrology, 2025, v. 29, n. 7, p. 912, doi. 10.1007/s10157-025-02639-2

By:

Yamamoto, Keiko;
Yamamoto, Tadashi

Publication type:

Article

Comparative Analysis of the Human Proteome Profile in Visceral Adipose and Liver Tissue in Individuals with Obesity with and Without MASLD and MASH.

Published in:

Livers, 2025, v. 5, n. 2, p. 16, doi. 10.3390/livers5020016

By:

Pedersen, Julie S.;
Niu, Lili;
Wewer Albrechtsen, Nicolai J.;
Kristiansen, Viggo B.;
Poulsen, Inge Marie;
Serizawa, Reza R.;
Hansen, Torben;
Gluud, Lise Lotte;
Madsbad, Sten;
Bendtsen, Flemming

Publication type:

Article

组学视角下羊肚菌抗逆响应机制的研究进展.

Published in:

Mycosystema, 2025, v. 44, n. 6, p. 1, doi. 10.13346/j.mycosystema.250019

By:

赵瑞华

Publication type:

Article

A Meta‐Analysis of the Effects of Early Life Stress on the Prefrontal Cortex Transcriptome Reveals Long‐Term Downregulation of Myelin‐Related Gene Expression.

Published in:

Brain & Behavior, 2025, v. 15, n. 6, p. 1, doi. 10.1002/brb3.70608

By:

Duan, Toni Q.;
Hagenauer, Megan H.;
Flandreau, Elizabeth I.;
Bader, Anne;
Nguyen, Duy Manh;
Maras, Pamela M.;
Lima, Randriely Merscher S. De;
Gyles, Trevonn;
Mclain, Christabel;
Meaney, Michael J.;
Nestler, Eric J.;
Watson, Stanley J.;
Akil, Huda

Publication type:

Article

Interference from haemolysis on serum protein electrophoresis in the identification and quantification of monoclonal immunoglobulins.

Published in:

Scandinavian Journal of Clinical & Laboratory Investigation, 2025, v. 85, n. 4, p. 305, doi. 10.1080/00365513.2025.2511303

By:

Blavnsfeldt, Anne-Birgitte Garm;
Abildgaard, Anders Mønsted

Publication type:

Article

Deep learning for predicting essential proteins using topological features and gene ontology.

Published in:

Neural Computing & Applications, 2025, v. 37, n. 19, p. 13965, doi. 10.1007/s00521-025-11217-2

By:

Islam, Md. Shahidul;
Islam, Md. Rafiqul;
Mistry, Durjoy

Publication type:

Article

Identification of candidate proteins influencing spermatogenesis in Shandong black cattle via integrated multiomics analysis.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11825-1

By:

Zhao, Qiuyue;
Liu, Ruili;
Miao, Xiuping;
Mei, Yanfang;
Wang, Xiuyuan;
Ma, Jiaxu;
Zou, Lei;
Zhang, Renzheng;
Bai, Xuejin;
Dong, Yajuan

Publication type:

Article

Automated sparse feature selection in high-dimensional proteomics data via 1-bit compressed sensing and K-Medoids clustering.

Published in:

BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06193-2

By:

Wen, FuDong;
Su, Yue;
Liu, Dan;
Wang, YuPeng;
Liu, MeiNa

Publication type:

Article

Integrated transcriptomic and proteomic analysis identified key folate biosynthesis gene in waxy maize.

Published in:

Crop Journal (2095-5421), 2025, v. 13, n. 3, p. 919, doi. 10.1016/j.cj.2025.02.008

By:

Yanyan Jiao;
Yaxing Shi;
Hui Dong;
Yujing Pan;
Hui Liu;
Zhiyong Li;
Xiaqing Wang;
Chunhui Li;
Tianyi Wang;
Shuai Wang;
Ronghuan Wang;
Baishan Lu;
Wei Song;
Jiuran Zhao

Publication type:

Article

ABA-activated subclass III SnRK2s control kernel maturation in maize.

Published in:

Crop Journal (2095-5421), 2025, v. 13, n. 3, p. 777, doi. 10.1016/j.cj.2025.04.006

By:

Yayun Wang;
Tiandan Long;
Aying Qin;
Qiang Liao;
Hao Wang;
Junjie Zhang;
Hanmei Liu;
Yinghong Liu;
Yufeng Hu;
Yubi Huang;
Yangping Li

Publication type:

Article

Identification of Proteins Associated with Stably Integrated Maize b1 Tandem Repeat Transgene Chromatin.

Published in:

Plants (2223-7747), 2025, v. 14, n. 12, p. 1863, doi. 10.3390/plants14121863

By:

Lynn, Jason S.;
Koirtyohann, Kathryn M.;
Gebreab, Yacob B.;
Edwards, Jaliyah;
McGinnis, Karen M.

Publication type:

Article

Hippocampal Proteomics Reveals the Novel Molecular Profiling of Postnatal Lead (Pb) Exposure on Autism-like Behaviors.

Published in:

Toxics, 2025, v. 13, n. 6, p. 465, doi. 10.3390/toxics13060465

By:

Liu, Li;
Zhou, Xulan;
Ma, Zihan;
Liu, Ruming;
Zhang, Yuhan;
Wang, Yaqi;
Liu, Yiwen;
Xia, Xiaochun;
Wang, Juan

Publication type:

Article

Targeted proteomics of serum IGF-I, -II, IGFBP-2, -3, -4, -5, -6 and ALS.

Published in:

Clinical Chemistry & Laboratory Medicine, 2025, v. 63, n. 8, p. 1528, doi. 10.1515/cclm-2024-1428

By:

Albrethsen, Jakob;
Drici, Lylia;
Slot Vilmann, Lea Marie;
Holmboe, Stine A.;
Thomsen, Charlotte Ehlers;
Rogaczewska Groendahl, Veronica Lykke;
Ottenheijm, Maud Eline;
Nielsen, Annelaura Bach;
Christoffersen, Christina;
Aksglaede, Lise;
Hagen, Casper P.;
Wewer Albrechtsen, Nicolai J.;
Juul, Anders

Publication type:

Article

Identification of Proteins Associated with Ovarian Cancer Chemotherapy Resistance Using MALDI-MSI.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 12, p. 5893, doi. 10.3390/ijms26125893

By:

Noye, Tannith M.;
Mittal, Parul;
Price, Zoe K.;
Fewster, Annie;
Williams, Georgia;
Pukala, Tara L.;
Klingler-Hoffmann, Manuela;
Hoffmann, Peter;
Oehler, Martin K.;
Lokman, Noor A.;
Ricciardelli, Carmela

Publication type:

Article

Integrated Plasma and Tumor Proteomics of Nasopharyngeal Carcinoma in a Moroccan Cohort.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 12, p. 5771, doi. 10.3390/ijms26125771

By:

Reffai, Ayman;
Hori, Michelle;
Adusumilli, Ravali;
Bermudez, Abel;
Haddad, Houssam;
Tawfiq, Nezha;
Pitteri, Sharon;
Bennani Mechita, Mohcine;
Mallick, Parag

Publication type:

Article

Multi-Omic Analysis Identifies Key Genes Driving Testicular Fusion in Spodoptera litura.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 12, p. 5564, doi. 10.3390/ijms26125564

By:

Dong, Yaqun;
Luo, Haoyun;
Huang, Lihua;
Liu, Lin

Publication type:

Article

Plasma Proteome Profiling Reveals Inflammation Markers and Tafamidis Effects in V30M Transthyretin Polyneuropathy.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 12, p. 5534, doi. 10.3390/ijms26125534

By:

Nugroho, Karina;
Lin, Chung-yon;
Monteiro, Cecilia;
Coelho, Teresa;
Moresco, James J.;
Pinto, Antonio F. M.;
Powers, Evan T.;
Yates III, John R.;
Diedrich, Jolene K.;
Kelly, Jeffery W.

Publication type:

Article

Proteomic Analysis of ARID1A-Deficient Ovarian Clear Cell Carcinoma Cells Reveals Differential Mitochondria ETC Subunit Abundances and Targetable Mitochondrial Pathways.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 12, p. 5466, doi. 10.3390/ijms26125466

By:

Perez, Jesenia M.;
Ryu, Joohyun;
Khan, Hannah;
Shetty, Mihir;
Parker, Emma;
D'Arcy, Padraig;
Zhu, Shijia;
Bazzaro, Martina;
Thomas, Stefani N.

Publication type:

Article

Sequential Plasma Metabolome and Proteome Analyses to Develop a Novel Monitoring Strategy for Patients with Epithelial Ovarian Cancer: A Pilot Study.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 12, p. 5435, doi. 10.3390/ijms26125435

By:

Hishinuma, Eiji;
Shigeta, Shogo;
Matsukawa, Naomi;
Okamura, Yasunobu;
Motoike, Ikuko N.;
Minato, Takamichi;
Shibuya, Yusuke;
Yasuda, Jun;
Kinoshita, Kengo;
Koshiba, Seizo;
Shimada, Muneaki

Publication type:

Article

Behavioral assessment and gene expression changes in a mouse model with dysfunctional STAT1 signaling.

Published in:

Cell Communication & Signaling, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12964-025-02313-w

By:

Büschgens, Luca;
Hempel, Nina;
Methi, Aditi;
Fischer, Andre;
Siering, Nele;
Piepkorn, Lars;
Jahn, Olaf;
Meyer, Thomas;
Wirths, Oliver

Publication type:

Article

Identification of plasma proteins associated with seizures in epilepsy: A consensus machine learning approach.

Published in:

PLoS ONE, 2025, v. 20, n. 7, p. 1, doi. 10.1371/journal.pone.0327317

By:

Ashtiani, Saman Hosseini;
Akel, Sarah;
Banote, Rakesh Kumar;
Asztely, Fredrik;
Zelano, Johan

Publication type:

Article

Clinical Connections.

Published in:: Arthritis & Rheumatology, 2025, v. 77, n. 7, p. 1, doi. 10.1002/art.43282
Publication type:: Article

Genome‐Wide Aggregated Trans Effects Analysis Identifies Genes Encoding Immune Checkpoints as Core Genes for Rheumatoid Arthritis.

Published in:

Arthritis & Rheumatology, 2025, v. 77, n. 7, p. 817, doi. 10.1002/art.43125

By:

Spiliopoulou, Athina;
Iakovliev, Andrii;
Plant, Darren;
Sutcliffe, Megan;
Sharma, Seema;
Cubuk, Cankut;
Lewis, Myles;
Pitzalis, Costantino;
Barton, Anne;
McKeigue, Paul M.

Publication type:

Article

Proteomic Profiling of the Large‐Vessel Vasculitis Spectrum Identifying Shared Signatures of Innate Immune Activation and Stromal Remodeling.

Published in:

Arthritis & Rheumatology, 2025, v. 77, n. 7, p. 884, doi. 10.1002/art.43110

By:

Maughan, Robert T.;
Macdonald‐Dunlop, Erin;
Haroon‐Rashid, Lubna;
Sorensen, Louise;
Chaddock, Natalie;
Masters, Shauna;
Porter, Andrew;
Peverelli, Marta;
Pericleous, Charis;
Hutchings, Andrew;
Robinson, James;
Youngstein, Taryn;
Luqmani, Raashid A.;
Mason, Justin C.;
Morgan, Ann W.;
Peters, James E.

Publication type:

Article

Identification of Novel Genetic Loci Involved in Testis Traits of the Jiangxi Local Breed Based on GWAS Analyses.

Published in:

Genes, 2025, v. 16, n. 6, p. 637, doi. 10.3390/genes16060637

By:

Ma, Jing-E;
Huang, Ke;
Gibril, Bahareldin Ali Abdalla;
Xiong, Xinwei;
Wu, Yanping;
Wang, Zhangfeng;
Xu, Jiguo

Publication type:

Article

Molecular Genomics of Oral Submucous Fibrosis: A Narrative Review.

Published in:

Genes, 2025, v. 16, n. 6, p. 612, doi. 10.3390/genes16060612

By:

Zisis, Vasileios;
Zisis, Stefanos;
Charisi, Christina;
Poulopoulos, Konstantinos;
Sarkisian, Aristeidis;
Poulopoulos, Athanasios

Publication type:

Article

Bacterial evolution: To divide and conquer.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 10, p. 602, doi. 10.1038/nrmicro3556

By:

Waldron, Denise

Publication type:

Article

Sequencing and beyond: integrating molecular 'omics' for microbial community profiling.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 6, p. 360, doi. 10.1038/nrmicro3451

By:

Franzosa, Eric A.;
Hsu, Tiffany;
Sirota-Madi, Alexandra;
Shafquat, Afrah;
Abu-Ali, Galeb;
Morgan, Xochitl C.;
Huttenhower, Curtis

Publication type:

Article

Microbial ecology: Turning up the heat on biofilms.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 9, p. 596, doi. 10.1038/nrmicro3340

By:

Kåhrström, Christina Tobin

Publication type:

Article

Sequencing parasite populations.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 2, p. 85, doi. 10.1038/nrmicro2738

By:

Sanchez-Flores, Alejandro

Publication type:

Article

Covariance Matrix Estimation for High-Throughput Biomedical Data with Interconnected Communities.

Published in:

American Statistician, 2024, v. 78, n. 4, p. 401, doi. 10.1080/00031305.2024.2329681

By:

Yang, Yifan;
Chen, Chixiang;
Chen, Shuo

Publication type:

Article

Palmitoylation: A New Regulatory Role in Meiosis.

Published in:

PLoS Biology, 2013, v. 11, n. 7, p. 1, doi. 10.1371/journal.pbio.1001598

By:

Sedwick, Caitlin

Publication type:

Article

Quantitative Control of Protein <i>S</i>-Palmitoylation Regulates Meiotic Entry in Fission Yeast.

Published in:

PLoS Biology, 2013, v. 11, n. 7, p. 1, doi. 10.1371/journal.pbio.1001597

By:

Zhang, Mingzi M.;
Wu, Pei-Yun Jenny;
Kelly, Felice D.;
Nurse, Paul;
Hang, Howard C.

Publication type:

Article

Sakshat Labs: India's Virtual Proteomics Initiative.

Published in:

PLoS Biology, 2012, v. 10, n. 7, p. 1, doi. 10.1371/journal.pbio.1001353

By:

Ray, Sandipan;
Koshy, Nicole R.;
Diwakar, Shyam;
Nair, Bipin;
Srivastava, Sanjeeva

Publication type:

Article

The Leukemia-Associated Mllt10/Af10-Dot1l Are Tcf4/β- Catenin Coactivators Essential for Intestinal Homeostasis.

Published in:

PLoS Biology, 2010, v. 8, n. 11, p. 1, doi. 10.1371/journal.pbio.1000539

By:

Mahmoudi, Tokameh;
Boj, Sylvia F.;
Hatzis, Pantelis;
Li, Vivian S. W.;
Taouatas, Nadia;
Vries, Robert G. J.;
Teunissen, Hans;
Begthel, Harry;
Korving, Jeroen;
Mohammed, Shabaz;
Heck, Albert J. R.;
Clevers, Hans

Publication type:

Article

Widespread Protein Aggregation as an Inherent Part of Aging in C. elegans.

Published in:

PLoS Biology, 2010, v. 8, n. 8, p. 1, doi. 10.1371/journal.pbio.1000450

By:

David, Della C.;
Ollikainen, Noah;
Trinidad, Jonathan C.;
Cary, Michael P.;
Burlingame, Alma L.;
Kenyon, Cynthia

Publication type:

Article

Comparative Functional Analysis of the Caenorhabditis elegans and Drosophila melanogaster Proteomes.

Published in:

PLoS Biology, 2009, v. 7, n. 3, p. e1000048, doi. 10.1371/journal.pbio.1000048

By:

Schrimpf, Sabine P.;
Weiss, Manuel;
Reiter, Lukas;
Ahrens, Christian H.;
Jovanovic, Marko;
Malmström, Johan;
Brunner, Erich;
Mohanty, Sonali;
Lercher, Martin J.;
Hunziker, Peter E.;
Aebersold, Ruedi;
von Mering, Christian;
Hengartner, Michael O.

Publication type:

Article

Proteomic Profiling of γ-Secretase Substrates and Mapping of Substrate Requirements.

Published in:

PLoS Biology, 2008, v. 6, n. 10, p. 2314, doi. 10.1371/journal.pbio.0060257

By:

Hemming, Matthew L.;
Elias, Joshua E.;
Gygi, Steven P.;
Selkoe, Dennis J.

Publication type:

Article

Proteomics Reveals Novel Drosophila Seminal Fluid Proteins Transferred at Mating.

Published in:

PLoS Biology, 2008, v. 6, n. 7, p. e178, doi. 10.1371/journal.pbio.0060178

By:

Findlay, Geoffrey D.;
Yi, Xianhua;
MacCoss, Michael J.;
Swanson, Willie J.

Publication type:

Article

Integrative Analysis of the Mitochondrial Proteome in Yeast.

Published in:

PLoS Biology, 2004, v. 2, n. 6, p. 1, doi. 10.1371/journal.pbio.0020160

By:

Prokisch, Holger;
Scharfe, Curt;
Camp II, David G;
Xiao, Wenzhong;
David, Lior;
Andreoli, Christophe;
Monroe, Matthew E;
Moore, Ronald J;
Gritsenko, Marina A;
Kozany, Christian;
Hixson, Kim K;
Mottaz, Heather M;
Zischka, Hans;
Ueffing, Marius;
Herman, Zelek S;
Davis, Ronald W;
Meitinger, Thomas;
Oefner, Peter J;
Smith, Richard D;
Steinmetz, Lars M

Publication type:

Article

Protein Interaction Networks by Proteome Peptide Scanning.

Published in:

PLoS Biology, 2004, v. 2, n. 1, p. 1, doi. 10.1371/journal.pbio.0020014

By:

Landgraf, Christiane;
Panni, Simona;
Montecchi-Palazzi, Luisa;
Castagnoli, Luisa;
Schneider-Mergener, Jens;
Volkmer-Engert, Rudolf;
Cesareni, Gianni

Publication type:

Article

Protein Interaction Networks by Proteome Peptide Scanning.

Published in:

PLoS Biology, 2004, v. 2, n. 1, p. 0094, doi. 10.1371/journal.pbio.0020014

By:

Landgraf, Christiane;
Panni, Simona;
Montecchi-Palazzi, Luisa;
Castagnoli, Luisa;
Schneider-Mergener, Jens;
Volkmer-Engert, Rudolf;
Cesareni, Gianni;
Joyce, Gerald

Publication type:

Article

Elevated levels of circulating CDH5 and FABP1 in association with human drug-induced liver injury.

Published in:

Liver International, 2017, v. 37, n. 1, p. 132, doi. 10.1111/liv.13174

By:

Mikus, Maria;
Drobin, Kimi;
Gry, Marcus;
Bachmann, Julie;
Lindberg, Johan;
Yimer, Getnet;
Aklillu, Eleni;
Makonnen, Eyasu;
Aderaye, Getachew;
Roach, James;
Fier, Ian;
Kampf, Caroline;
Göpfert, Jens;
Perazzo, Hugo;
Poynard, Thierry;
Stephens, Camilla;
Andrade, Raúl J.;
Lucena, M Isabel;
Arber, Nadir;
Uhlén, Mathias

Publication type:

Article

Pretransplant urinary proteome analysis does not predict development of chronic kidney disease after liver transplantation.

Published in:

Liver International, 2015, v. 35, n. 7, p. 1893, doi. 10.1111/liv.12763

By:

Milongo, David;
Bascands, Jean ‐ Loup;
Huart, Antoine;
Esposito, Laure;
Breuil, Benjamin;
Moulos, Panagiotis;
Siwy, Justyna;
Ramírez ‐ Torres, Adela;
Ribes, David;
Lavayssière, Laurence;
Del Bello, Arnaud;
Muscari, Fabrice;
Alric, Laurent;
Bureau, Christophe;
Rostaing, Lionel;
Schanstra, Joost P;
Kamar, Nassim

Publication type:

Article