Works about PLANT genomes

Results: 5000

Diverging repeatomes in holoparasitic Hydnoraceae uncover a playground of genome evolution.

Published in:

New Phytologist, 2025, v. 247, n. 3, p. 1520, doi. 10.1111/nph.70280

By:

Kim, Woorin;
Schmidt, Nicola;
Jost, Matthias;
Mkala, Elijah Mbandi;
Winkler, Sylke;
Hu, Guangwan;
Heitkam, Tony;
Wanke, Stefan

Publication type:

Article

Evolutionary conservation of the grape sex-determining region in angiosperms and emergence of dioecy in Vitaceae.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-61387-9

By:

Massonnet, Mélanie;
Cochetel, Noé;
Ricciardi, Valentina;
Minio, Andrea;
Figueroa-Balderas, Rosa;
Londo, Jason P.;
Cantu, Dario

Publication type:

Article

Genomic and epigenomic insight into giga-chromosome architecture and adaptive evolution of royal lily (Lilium regale).

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-61289-w

By:

Sun, Jie;
Wang, Xiangfeng;
Wang, Ke;
Meng, Dian;
Mu, Yu;
Zhang, Lili;
Wang, Jingxuan;
Yao, Gang;
Guo, Li

Publication type:

Article

Characterization and phylogenetic analysis of the complete chloroplast genome of Cordia subcordata Lamarck 1899, a protected plant in China.

Published in:

Mitochondrial DNA: Resources, 2025, v. 10, n. 7, p. 631, doi. 10.1080/23802359.2025.2519220

By:

Liu, Mingzhong;
Zhang, Hui;
Tang, Wen;
Gao, Zhenyang;
Zhao, Muqiu;
Shi, Yunfeng

Publication type:

Article

Complete chloroplast genomes of 25 mulberry plants: insight into genome characteristics, comparative analysis and phylogenetic relationships.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11823-3

By:

Yang, Jinhong;
Jiang, Wei;
Huang, Jiayue;
Peng, Yunwu;
Yang, Fang;
Kong, Weiqing

Publication type:

Article

Ancestral and recent bursts of transposition shaped the massive genomes of plant pathogenic rust fungi.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11726-3

By:

Corre, Emma;
Morin, Emmanuelle;
Duplessis, Sébastien;
Lorrain, Cecile

Publication type:

Article

Flipping the switch on some of the slowest mutating genomes: Direct measurements of plant mitochondrial and plastid mutation rates in msh1 mutants.

Published in:

PLoS Genetics, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.pgen.1011764

By:

Broz, Amanda K.;
Hodous, Mychaela M.;
Zou, Yi;
Vail, Patricia C.;
Wu, Zhiqiang;
Sloan, Daniel B.

Publication type:

Article

Complete sequencing of the mitochondrial genome of tea plant Camellia sinensis cv. 'Baihaozao': multichromosomal structure, phylogenetic relationships, and adaptive evolutionary analysis.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1604404

By:

Chen, Zhiyin;
Wang, Zixu;
Zhou, Wei;
Liu, Sijie;
Xiao, Yuxin;
Gong, Yihui

Publication type:

Article

Assembly and Comparative Analysis of the Complete Mitochondrial Genome of Bromus inermis.

Published in:

Genes, 2025, v. 16, n. 6, p. 652, doi. 10.3390/genes16060652

By:

Feng, Sibin;
Wu, Zinian;
Tian, Chunyu;
Yang, Yanting;
Gong, Wenlong;
Li, Zhiyong

Publication type:

Article

Haplotype-Resolved Assembly in Polyploid Plants: Methods, Challenges, and Implications for Evolutionary and Breeding Research.

Published in:

Genes, 2025, v. 16, n. 6, p. 636, doi. 10.3390/genes16060636

By:

Zhao, Zhenning;
Shi, Tao

Publication type:

Article

Geminiviruses: masters at redirecting and reprogramming plant processes.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 11, p. 777, doi. 10.1038/nrmicro3117

By:

Hanley-Bowdoin, Linda;
Bejarano, Eduardo R.;
Robertson, Dominique;
Mansoor, Shahid

Publication type:

Article

Genome evolution in filamentous plant pathogens: why bigger can be better.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 6, p. 417, doi. 10.1038/nrmicro2790

By:

Raffaele, Sylvain;
Kamoun, Sophien

Publication type:

Article

The first green revolution.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 5, p. 314, doi. 10.1038/nrmicro2781

By:

Tsai, Isheng J.

Publication type:

Article

Plant killers on the spot.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 9, p. 615, doi. 10.1038/nrmicro2433

By:

Pain, Arnab;
Hertz-Fowler, Christiane

Publication type:

Article

Precision Genome Engineering and Agriculture: Opportunities and Regulatory Challenges.

Published in:

PLoS Biology, 2014, v. 12, n. 6, p. 1, doi. 10.1371/journal.pbio.1001877

By:

Voytas, Daniel F.;
Gao, Caixia

Publication type:

Article

Autoimmunity: A Barrier to Gene Flow in Plants?

Published in:

PLoS Biology, 2007, v. 5, n. 9, p. e262, doi. 10.1371/journal.pbio.0050262

By:

Gross, Liza

Publication type:

Article

Horizontal Transfer of a Plant Transposon.

Published in:

PLoS Biology, 2006, v. 4, n. 1, p. e5, doi. 10.1371/journal.pbio.0040005

By:

Xianmin Diao;
Freeling, Michael;
Lisch, Damon

Publication type:

Article

Horizontal Transfer of a Plant Transposon.

Published in:

PLoS Biology, 2005, v. 3, n. 12, p. 1, doi. 10.1371/journal.pbio.0040005

By:

Diao, Xianmin;
Freeling, Michael;
Lisch, Damon

Publication type:

Article

Separating Wheat from Chaff in Plant Genomes.

Published in:: PLoS Biology, 2005, v. 3, n. 1, p. 6, doi. 10.1371/journal.pbio.0030039
Publication type:: Article

Stopping the Rot.

Published in:

PLoS Biology, 2004, v. 2, n. 7, p. 891, doi. 10.1371/journal.pbio.0020213

By:

Nicholls, Henry

Publication type:

Article

Mapping QTLs Controlling Beneficial Fatty Acids Based on the Embryo and Maternal Plant Genomes in Brassica napus L.

Published in:

Journal of the American Oil Chemists' Society (JAOCS), 2015, v. 92, n. 4, p. 541, doi. 10.1007/s11746-015-2618-3

By:

Wen, Juan;
Xu, Jianfeng;
Long, Yan;
Xu, Haiming;
Wu, Jianguo;
Meng, Jinling;
Shi, Chunhai

Publication type:

Article

Comparative assessment of chloroplast transcriptional responses highlights conserved and unique patterns across Triticeae members under salt stress.

Published in:

Photosynthesis Research, 2018, v. 136, n. 3, p. 357, doi. 10.1007/s11120-017-0469-5

By:

Mirzaei, Saeid;
Mansouri, Mehdi;
Mohammadi-Nejad, Ghasem;
Sablok, Gaurav

Publication type:

Article

Phylogenomic analysis of the Chlamydomonas genome unmasks proteins potentially involved in photosynthetic function and regulation.

Published in:

Photosynthesis Research, 2010, v. 106, n. 1/2, p. 3, doi. 10.1007/s11120-010-9555-7

By:

Grossman, Arthur;
Karpowicz, Steven;
Heinnickel, Mark;
Dewez, David;
Hamel, Blaise;
Dent, Rachel;
Niyogi, Krishna;
Johnson, Xenie;
Alric, Jean;
Wollman, Francis-André;
Huiying Li;
Merchant, Sabeeha

Publication type:

Article

Highly distinct chromosomal structures in cowpea ( Vigna unguiculata), as revealed by molecular cytogenetic analysis.

Published in:

Chromosome Research, 2016, v. 24, n. 2, p. 197, doi. 10.1007/s10577-015-9515-3

By:

Iwata-Otsubo, Aiko;
Lin, Jer-Young;
Gill, Navdeep;
Jackson, Scott

Publication type:

Article

A cytogenetic and comparative map of camelid chromosome 36 and the minute in alpacas.

Published in:

Chromosome Research, 2015, v. 23, n. 2, p. 237, doi. 10.1007/s10577-014-9463-3

By:

Avila, Felipe;
Baily, Malorie;
Merriwether, David;
Trifonov, Vladimir;
Rubes, Jiři;
Kutzler, Michelle;
Chowdhary, Renuka;
Janečka, Jan;
Raudsepp, Terje

Publication type:

Article

The diversification and activity of hAT transposons in Musa genomes.

Published in:

Chromosome Research, 2014, v. 22, n. 4, p. 559, doi. 10.1007/s10577-014-9445-5

By:

Menzel, Gerhard;
Heitkam, Tony;
Seibt, Kathrin;
Nouroz, Faisal;
Müller-Stoermer, Manuela;
Heslop-Harrison, John;
Schmidt, Thomas

Publication type:

Article

Tobacco karyotyping by accurate centromere identification and novel repetitive DNA localization.

Published in:

Chromosome Research, 2013, v. 21, n. 4, p. 375, doi. 10.1007/s10577-013-9363-y

By:

Shibata, Fukashi;
Nagaki, Kiyotaka;
Yokota, Etsuko;
Murata, Minoru

Publication type:

Article

Development of pachytene FISH maps for six maize chromosomes and their integration with other maize maps for insights into genome structure variation.

Published in:

Chromosome Research, 2012, v. 20, n. 4, p. 363, doi. 10.1007/s10577-012-9281-4

By:

Figueroa, Debbie;
Bass, Hank

Publication type:

Article

Total centromere size and genome size are strongly correlated in ten grass species.

Published in:

Chromosome Research, 2012, v. 20, n. 4, p. 403, doi. 10.1007/s10577-012-9284-1

By:

Zhang, Han;
Dawe, R.

Publication type:

Article

Three TERT genes in Nicotiana tabacum.

Published in:

Chromosome Research, 2012, v. 20, n. 4, p. 381, doi. 10.1007/s10577-012-9282-3

By:

Sýkorová, Eva;
Fulnečková, Jana;
Mokroš, Petr;
Fajkus, Jiří;
Fojtová, Miloslava;
Peška, Vratislav

Publication type:

Article

Exploring giant plant genomes with next-generation sequencing technology.

Published in:

Chromosome Research, 2011, v. 19, n. 7, p. 939, doi. 10.1007/s10577-011-9246-z

By:

Kelly, Laura;
Leitch, Ilia

Publication type:

Article

DNA content variation in monilophytes and lycophytes: large genomes that are not endopolyploid.

Published in:

Chromosome Research, 2011, v. 19, n. 6, p. 763, doi. 10.1007/s10577-011-9228-1

By:

Bainard, Jillian;
Henry, Thomas;
Bainard, Luke;
Newmaster, Steven

Publication type:

Article

The effects of rapid desiccation on estimates of plant genome size.

Published in:

Chromosome Research, 2011, v. 19, n. 6, p. 825, doi. 10.1007/s10577-011-9232-5

By:

Bainard, Jillian;
Husband, Brian;
Baldwin, Sarah;
Fazekas, Aron;
Gregory, T.;
Newmaster, Steven;
Kron, Paul

Publication type:

Article

The Ty1- copia families SALIRE and Cotzilla populating the Beta vulgaris genome show remarkable differences in abundance, chromosomal distribution, and age.

Published in:

Chromosome Research, 2010, v. 18, n. 2, p. 247, doi. 10.1007/s10577-009-9104-4

By:

Weber, Beatrice;
Wenke, Torsten;
Frömmel, Ulrike;
Schmidt, Thomas;
Heitkam, Tony

Publication type:

Article

FIDEL—a retrovirus-like retrotransposon and its distinct evolutionary histories in the A- and B-genome components of cultivated peanut.

Published in:

Chromosome Research, 2010, v. 18, n. 2, p. 227, doi. 10.1007/s10577-009-9109-z

By:

Nielen, Stephan;
Campos-Fonseca, Fernando;
Leal-Bertioli, Soraya;
Guimarães, Patricia;
Seijo, Guillermo;
Town, Christopher;
Arrial, Roberto;
Bertioli, David

Publication type:

Article

An efficient transgene-free DNA-editing system for Arabidopsis using a fluorescent marker.

Published in:

Biotechnology Letters, 2020, v. 42, n. 2, p. 313, doi. 10.1007/s10529-019-02778-z

By:

Ouyang, Lejun;
Ma, Mingsai;
Li, Limei

Publication type:

Article

Application of direct PCR in a forensic case of yew poisoning.

Published in:

International Journal of Legal Medicine, 2012, v. 126, n. 2, p. 315, doi. 10.1007/s00414-011-0607-0

By:

Gausterer, Christian;
Stein, Christina;
Stimpfl, Thomas

Publication type:

Article

Whole genome sequencing and comparative genomic analyses of Pseudomonas aeruginosa strain isolated from arable soil reveal novel insights into heavy metal resistance and codon biology.

Published in:

Current Genetics, 2022, v. 68, n. 3/4, p. 481, doi. 10.1007/s00294-022-01245-z

By:

Saha, Jayanti;
Dey, Sourav;
Pal, Ayon

Publication type:

Article

Survey and analysis of simple sequence repeats in the Laccaria bicolor genome, with development of microsatellite markers.

Published in:

Current Genetics, 2011, v. 57, n. 2, p. 75, doi. 10.1007/s00294-010-0328-9

By:

Labbé, Jessy;
Murat, Claude;
Morin, Emmanuelle;
Tacon, François;
Martin, Francis

Publication type:

Article

The complete mitochondrial genome sequence of the liverwort Pleurozia purpurea reveals extremely conservative mitochondrial genome evolution in liverworts.

Published in:

Current Genetics, 2009, v. 55, n. 6, p. 601, doi. 10.1007/s00294-009-0273-7

By:

Bin Wang;
Jiayu Xue;
Libo Li;
Yang Liu;
Yin-Long Qiu

Publication type:

Article

Bringing nitrilase sequences from databases to life: the search for novel substrate specificities with a focus on dinitriles.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 5, p. 2193, doi. 10.1007/s00253-015-7023-1

By:

Veselá, Alicja;
Rucká, Lenka;
Kaplan, Ondřej;
Pelantová, Helena;
Nešvera, Jan;
Pátek, Miroslav;
Martínková, Ludmila

Publication type:

Article

Production and metabolic engineering of bioactive substances in plant hairy root culture.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 90, n. 4, p. 1229, doi. 10.1007/s00253-011-3228-0

By:

Mei-Liang Zhou;
Xue-Mei Zhu;
Ji-Rong Shao;
Yi-Xiong Tang;
Yan-Min Wu

Publication type:

Article

Development of a transgenic tobacco plant for phytoremediation of methylmercury pollution.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 87, n. 2, p. 781, doi. 10.1007/s00253-010-2572-9

By:

Nagata, Takeshi;
Morita, Hirofumi;
Akizawa, Toshifumi;
Pan-Hou, Hidemitsu

Publication type:

Article

Effects of indole-3-acetic acid on Sinorhizobium meliloti survival and on symbiotic nitrogen fixation and stem dry weight production.

Published in:

Applied Microbiology & Biotechnology, 2009, v. 83, n. 4, p. 727, doi. 10.1007/s00253-009-1974-z

By:

Imperlini, Esther;
Bianco, Carmelina;
Lonardo, Enza;
Camerini, Serena;
Cermola, Michele;
Moschetti, Giancarlo;
Defez, Roberto

Publication type:

Article

Accuracies of univariate and multivariate genomic prediction models in African cassava.

Published in:

Genetics Selection Evolution, 2017, v. 49, p. 1, doi. 10.1186/s12711-017-0361-y

By:

Okeke, Uche Godfrey;
Akdemir, Deniz;
Rabbi, Ismail;
Kulakow, Peter;
Jannink, Jean-Luc

Publication type:

Article

The ability of land plants to synthesize glucuronoxylans predates the evolution of tracheophytes.

Published in:

Glycobiology, 2012, v. 22, n. 3, p. 439, doi. 10.1093/glycob/cwr117

By:

Kulkarni, Ameya R;
Peña, Maria J;
Avci, Utku;
Mazumder, Koushik;
Urbanowicz, Breeanna R;
Pattathil, Sivakumar;
Yin, Yanbin;
O'Neill, Malcolm A;
Roberts, Alison W;
Hahn, Michael G;
Xu, Ying;
Darvill, Alan G;
York, William S

Publication type:

Article

Characterization of a putative 3-deoxy-d-manno-2-octulosonic acid (Kdo) transferase gene from Arabidopsis thaliana.

Published in:

Glycobiology, 2010, v. 20, n. 5, p. 617, doi. 10.1093/glycob/cwq011

By:

Séveno, Martial;
Séveno-Carpentier, Emilie;
Voxeur, Aline;
Menu-Bouaouiche, Laurence;
Rihouey, Christophe;
Delmas, Frédéric;
Chevalier, Christian;
Driouich, Azeddine;
Lerouge, Patrice

Publication type:

Article

A Flow Cytometry Protocol for Measurement of Plant Genome Size Using Frozen Material.

Published in:

Applied Biosciences, 2025, v. 4, n. 2, p. 28, doi. 10.3390/applbiosci4020028

By:

Soni, Abhishek;
Constantin, Lena;
Furtado, Agnelo;
Henry, Robert J

Publication type:

Article

Progress in Plant Genome Sequencing.

Published in:

Applied Biosciences, 2022, v. 1, n. 2, p. 113, doi. 10.3390/applbiosci1020008

By:

Henry, Robert J.

Publication type:

Article

Identification of new banana endogenous virus sequences highlights the hallmark gene encoded by retroviruses integrated in banana genomes.

Published in:

Phytopathology Research, 2024, v. 6, n. 1, p. 1, doi. 10.1186/s42483-024-00256-7

By:

Chen, Huazhou;
Li, Huaping;
Rao, Xueqin

Publication type:

Article