Works matching DE "NUCLEOTIDE sequence"

Results: 5000

Defining the high-translational readthrough stop codon context.

Published in:

PLoS Genetics, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.pgen.1011753

By:

Smoljanow, Daniela;
Lebeda, Dennis;
Hofhuis, Julia;
Thoms, Sven

Publication type:

Article

Genomic AT Bias Coupled with Amino Acid Metabolism Modulates Codon Usage.

Published in:

Journal of Molecular Evolution, 2025, v. 93, n. 3, p. 379, doi. 10.1007/s00239-025-10251-x

By:

Aliperti Car, Lucio;
Sánchez, Ignacio E.

Publication type:

Article

Systematics of the braconid wasp subfamily Rhysipolinae (Hymenoptera, Braconidae) based on UCE data, with the description of a new Neotropical genus.

Published in:

ZooKeys, 2025, n. 1234, p. 67, doi. 10.3897/zookeys.1234.147859

By:

García-Acosta, Gerardo Y.;
Castañeda-Osorio, Rubén;
Belokobylskij, Sergey A.;
Shimbori, Eduardo M.;
Jasso-Martínez, Jovana M.;
Penteado-Dias, Angélica M.;
Zaldívar-Riverón, Alejandro

Publication type:

Article

First records of Oxychilus alliarius and O. cellarius (Gastropoda, Stylommatophora, Oxychilidae) in Mexico: mtDNA identification and potential distributions.

Published in:

ZooKeys, 2025, n. 1224, p. 141, doi. 10.3897/zookeys.1224.129618

By:

Trujillo-Díaz, Ali Gabrielle;
Araiza-Gómez, Victoria;
García-Román, Jazmín;
Hernández-Domínguez, José Luis;
Zúñiga, Gerardo;
Naranjo-García, Edna

Publication type:

Article

New insights into Lactocollybia (Agaricales, Basidiomycota): Morpho-phylogenetic analyses revealing two interesting species and one new record from Thailand and evidence of intercontinental conspecificity.

Published in:

MycoKeys, 2025, n. 118, p. 313, doi. 10.3897/mycokeys.118.144986

By:

Bera, Ishika;
Wisitrassameewong, Komsit;
Thongklang, Naritsada

Publication type:

Article

Supramolecular Recognition of a DNA Four‐Way Junction by an M<sub>2</sub>L<sub>4</sub> Metallo‐Cage, Inspired by a Simulation‐Guided Design Approach.

Published in:

Angewandte Chemie, 2025, v. 137, n. 26, p. 1, doi. 10.1002/ange.202504866

By:

Dettmer, Samuel J.;
Williams, Hugo D.;
Napier, Richard;
Beames, Joseph M.;
Walker‑Griffiths, Steffan;
Craggs, Timothy D.;
Hannon, Michael J.

Publication type:

Article

Whole-transcriptome RNA sequencing reveals the global molecular responses in response to drought stress in common bean (Phaseolus vulgaris L.).

Published in:

Euphytica, 2025, v. 221, n. 6, p. 1, doi. 10.1007/s10681-025-03535-2

By:

Cai, Debao;
Zhang, Yupeng;
Ding, Donghui;
Yang, Shuqiong;
Zhang, Jun;
Chen, Jibao

Publication type:

Article

Dual therapeutic benefit of electroporation-mediated DNA vaccination in vivo.

Published in:

2014

By:

Calvet, Christophe Y;
André, Franck M;
Mir, Lluis M

Publication type:

Opinion

Novel SYK gene variations and changes in binding sites of miRs in breast cancer patients.

Published in:

Cancer Biomarkers, 2016, v. 16, n. 3, p. 319, doi. 10.3233/CBM-160569

By:

Faryal, R.;
Ishfaq, M.;
Hayatb, T.;
Mahjabeen, I.;
Kayani, M. A.

Publication type:

Article

Evaluating the clinical feasibility: The direct bisulfite genomic sequencing for examination of methylated status of protocadherin10 (PCDH10) promoter to predict the prognosis of gastric cancer.

Published in:

Cancer Biomarkers, 2015, v. 15, n. 5, p. 567, doi. 10.3233/CBM-150496

By:

Ya-Chao Hou;
Jing-Yu Deng;
Ru-Peng Zhang;
Xing-Ming Xie;
Jing-Li Cui;
Wei-Peng Wu;
Xi-Shan Hao;
Han Liang

Publication type:

Article

Ascending the learning curve – MSI testing experience of a six-laboratory consortium.

Published in:

Cancer Biomarkers, 2006, v. 2, n. 1/2, p. 5, doi. 10.3233/CBM-2006-21-202

By:

Lindor, Noralene M.;
Smalley, Reginia;
Barker, Melissa;
Bigler, Jeannette;
Krumroy, Lisa M.;
Lum-Jones, Annette;
Plummer, Sarah J.;
Selander, Teresa;
Thomas, Sushma;
Youash, Michelle;
Seminara, Daniela;
Casey, Graham;
Bapat, Bharati;
Thibodeau, Stephen N.

Publication type:

Article

Microsatellite instability in the development of DNA mismatch repair deficient tumors.

Published in:

Cancer Biomarkers, 2006, v. 2, n. 1/2, p. 69, doi. 10.3233/CBM-2006-21-208

By:

Woerner, Stefan M.;
Kloor, Matthias;
Von Knebel Doeberitz, Magnus;
Gebert, Johannes F.

Publication type:

Article

Molecular profiling of triple negative breast cancer.

Published in:

Breast Disease, 2011, v. 32, n. 1/2, p. 73, doi. 10.3233/BD-2010-0314

By:

Eng-Wong, Jennifer;
Zujewski, Jo Anne;
Ma, Cynthia X.;
Luo, Jingqin;
Ellis, Matthew J.

Publication type:

Article

DNA Methylation Signature of Aging: Potential Impact on the Pathogenesis of Parkinson's Disease.

Published in:

Journal of Parkinson's Disease, 2023, v. 13, n. 2, p. 145, doi. 10.3233/JPD-223517

By:

Yazar, Volkan;
Dawson, Valina L.;
Dawson, Ted M.;
Kang, Sung-Ung

Publication type:

Article

Epigenetic Biomarkers for Parkinson's Disease: From Diagnostics to Therapeutics.

Published in:

Journal of Parkinson's Disease, 2017, v. 7, n. 1, p. 1, doi. 10.3233/JPD-160914

By:

Jakubowski, Jennifer L.;
Labrie, Viviane

Publication type:

Article

RAD‐Seq Refines Previous Estimates of Genetic Structure in Lake Erie Walleye.

Published in:

Transactions of the American Fisheries Society, 2020, v. 149, n. 2, p. 159, doi. 10.1002/tafs.10215

By:

Chen, Kuan‐Yu;
Euclide, Peter T.;
Ludsin, Stuart A.;
Larson, Wesley A.;
Sovic, Michael G.;
Gibbs, H. Lisle;
Marschall, Elizabeth A.

Publication type:

Article

Environmental DNA (eDNA) Assays for Invasive Populations of Black Carp in North America.

Published in:

Transactions of the American Fisheries Society, 2019, v. 148, n. 6, p. 1043, doi. 10.1002/tafs.10195

By:

Guan, Xin;
Monroe, Emy M.;
Bockrath, Katherine D.;
Mize, Erica L.;
Rees, Christopher B.;
Lindsay, Denise L.;
Baerwaldt, Kelly L.;
Nico, Leo G.;
Lance, Richard F.

Publication type:

Article

Development and Application of Single‐Nucleotide Polymorphism (SNP) Genetic Markers for Conservation Monitoring of Burbot Populations.

Published in:

Transactions of the American Fisheries Society, 2019, v. 148, n. 3, p. 661, doi. 10.1002/tafs.10157

By:

Campbell, Matthew R.;
Vu, Ninh V.;
LaGrange, Amanda P.;
Hardy, Ryan S.;
Ross, Tyler J.;
Narum, Shawn R.

Publication type:

Article

Mitochondrial DNA Sequence Variation in Saugers.

Published in:

Transactions of the American Fisheries Society, 2012, v. 141, n. 3, p. 795, doi. 10.1080/00028487.2012.675921

By:

White, Matthew M.

Publication type:

Article

PRCFX-DT: a new graph-based approach for feature selection and classification of genomic sequences.

Published in:

BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06183-4

By:

Khodaei, Amin;
Eskandari, Sania;
Sharifi, Hadi;
Mozaffari-Tazehkand, Behzad

Publication type:

Article

Three new members of the green algal family Prasiolaceae (Prasiolales, Trebouxiophyceae) isolated from urban sites in Northern Germany.

Published in:

European Journal of Phycology, 2025, v. 60, n. 2, p. 185, doi. 10.1080/09670262.2025.2482042

By:

Heesch, Svenja

Publication type:

Article

Linking new DNA sequence data to old scientific names of Parvodinium (Peridiniopsidaceae, Dinophyceae).

Published in:

European Journal of Phycology, 2025, v. 60, n. 2, p. 115, doi. 10.1080/09670262.2025.2450678

By:

Lehner, Paula M. E.;
Zhu, Binbin;
Stark, Marina;
Knechtel, Johanna;
Nyoka, Hemingway;
Owsianny, Paweł M.;
Gottschling, Marc

Publication type:

Article

Not so Lessepsian migrants of the Spirobranchus tetraceros complex (Serpulidae, Annelida).

Published in:

Aquatic Invasions, 2025, v. 20, n. 1, p. 89, doi. 10.3391/ai.2025.20.1.136400

By:

Kupriyanova, Elena K.;
Daffe, Guillemine;
Pazoki, Samaneh;
Al-Kandari, Manal

Publication type:

Article

The Nanopore Chief Officer: An Interview with Clive Brown.

Published in:

GEN Biotechnology, 2025, v. 4, n. 3, p. 107, doi. 10.1089/genbio.2025.0022

By:

Brown, Clive;
Davies, Kevin

Publication type:

Article

SugiExDB: data repository for Cryptomeria japonica RNA-sequencing read counts in TogoDB.

Published in:

Journal of Wood Science, 2025, v. 71, n. 1, p. 1, doi. 10.1186/s10086-025-02205-0

By:

Takata, Naoki;
Sato, Ryosuke;
Nagano, Soichiro;
Ueno, Saneyoshi

Publication type:

Article

Klebsiella pneumoniae-Isolation, Identification and Characterization from Naturally Infected Farmed Raised Nile Tilapia Oreochromis niloticus (Linnaeus, 1758) in West Bengal, India.

Published in:

International Journal of Bio-Resource & Stress Management, 2025, v. 16, n. 5, p. 01, doi. 10.23910/1.2025.5811

By:

Meshram, Supradhnya Namdeo;
Abraham, T. Jawahar

Publication type:

Article

Correction to "New Insight into Mercury Removal from Fish Meat Using a Single‐Component Solution Containing Cysteine".

Published in:

2025

By:

Strachowski, Przemysław;
Mandava, Geeta;
Lundqvist, Johan;
Bordes, Romain;
Abdollahi, Mehdi

Publication type:

Correction Notice

Molecular Characterization of Tobacco Streak Virus, Beet Ringspot Virus, and Beet Ringspot Virus Satellite RNA from a New Natural Host, Phlox paniculata.

Published in:

Plants (2223-7747), 2025, v. 14, n. 11, p. 1619, doi. 10.3390/plants14111619

By:

Motsar, Elena;
Sheveleva, Anna;
Sharko, Fedor;
Petrova, Kristina;
Slobodova, Natalia;
Murataev, Ramil;
Mitrofanova, Irina;
Chirkov, Sergei

Publication type:

Article

The Liverworts of the Murmansk Region (North-West Russia): Providing an Annotated Checklist as a Basis for the Monitoring and Further Study of Liverwort Flora.

Published in:

Plants (2223-7747), 2025, v. 14, n. 11, p. 1590, doi. 10.3390/plants14111590

By:

Konstantinova, Nadezhda A.;
Borovichev, Evgeny A.;
Vilnet, Anna A.

Publication type:

Article

Solution conformational differences between conventional and CENP-A nucleosomes are accentuated by reversible deformation under high pressure.

Published in:

Chromosome Research, 2025, p. 1, doi. 10.1007/s10577-025-09769-z

By:

Gupta, Kushol;
Sekulić, Nikolina;
Allu, Praveen Kumar;
Sapp, Nicklas;
Huang, Qingqiu;
Sarachan, Kathryn;
Christensen, Mikkel;
Lund, Reidar;
Krueger, Susan;
Curtis, Joseph E.;
Gillilan, Richard E.;
Van Duyne, Gregory D.;
Black, Ben E.

Publication type:

Article

Phylogeny of circulating strains of Histoplasma capsulatum isolated from Saye, Kaduna State, Nigeria.

Published in:

Microbes & Infectious Diseases, 2025, v. 6, n. 2, p. 906, doi. 10.21608/MID.2023.247135.1665

By:

OSUMAH, Rabiah Orchewa;
DOKO, Muhammad Hassan Isa

Publication type:

Article

Role of the SAF-A/HNRNPU SAP domain in X chromosome inactivation, nuclear dynamics, transcription, splicing, and cell proliferation.

Published in:

PLoS Genetics, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.pgen.1011719

By:

Sharp, Judith A.;
Sparago, Emily;
Thomas, Rachael;
Alimenti, Kaitlyn;
Wang, Wei;
Blower, Michael D.

Publication type:

Article

Isolation and Molecular Identification of Nitrate-Reducing Bacteria from Swiftlet Houses in Sumedang, West Java.

Published in:

Acta Vet Indones. The Indonesian Veterinary Journal / Jurnal Acta Veterinaria Indonesiana, 2025, v. 13, n. 1, p. 1

By:

Ningrum, Siti Gusti;
Nurhidayat, Novik;
Yulinery, Titin;
Triana, Evi;
Puji Astuti Nussa, Olan Rahayu;
Kurnianto, Ady

Publication type:

Article

pPromoter-FCGR: Deep Learning on Frequency Chaos Game Representation for Prediction of DNA Promoters.

Published in:

Journal of Engineering & Smart Systems, 2025, v. 13, n. 2, p. 61, doi. 10.21541/apjess.1659716

By:

ŞILBIR, Gülbahar Merve

Publication type:

Article

Morphological and molecular characterization of Filenchus vulgaris (Brzeski, 1963) Lownsbery & Lownsbery, 1985 (Tylenchomorpha: Tylenchidae) from Iran.

Published in:

Plant Protection / Giyāh Pizishkī, 2025, v. 48, n. 1, p. 55, doi. 10.22055/ppr.2025.48697.1784

By:

Rajabzadeh, M.;
Azimi, S.

Publication type:

Article

Building Nucleosome Positioning Maps: Discovering Hidden Gems.

Published in:

WIREs: Computational Molecular Science, 2025, v. 15, n. 3, p. 1, doi. 10.1002/wcms.70029

By:

Masoudi‐Sobhanzadeh, Yosef;
Rahman, Anisur;
Li, Shuxiang;
Bazmi, Saman;
Kumar, Sushant;
Panchenko, Anna R.

Publication type:

Article

Analyzing and Interpreting Bacterial Omics Data for Antibiotic and Vaccine Development.

Published in:

IAENG International Journal of Computer Science, 2025, v. 52, n. 6, p. 1727

By:

Ali, Mohsin;
Choudhary, Jitendra

Publication type:

Article

Heterochromatin de novo formation and maintenance in Plasmodium falciparum.

Published in:

PLoS Pathogens, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.ppat.1013137

By:

Pérez-Cantero, Alba;
Llorà-Batlle, Oriol;
Pelaez-Conde, Ingrid;
Martínez-Guardiola, César;
Cortés, Alfred

Publication type:

Article

NCC—An Efficient Deep Learning Architecture for Non-Coding RNA Classification.

Published in:

Technologies (2227-7080), 2025, v. 13, n. 5, p. 196, doi. 10.3390/technologies13050196

By:

Vasilas, Konstantinos;
Makris, Evangelos;
Pavlatos, Christos;
Maglogiannis, Ilias

Publication type:

Article

The Genus Petunia (Solanaceae): Evolutionary Synthesis and Taxonomic Review.

Published in:

Plants (2223-7747), 2025, v. 14, n. 10, p. 1478, doi. 10.3390/plants14101478

By:

Soares, Luana S.;
Stehmann, João R.;
Freitas, Loreta B.

Publication type:

Article

Assessment of genetically modified maize MON 87427 for renewal authorisation under Regulation (EC) No 1829/2003 (dossier GMFF‐2023‐21254).

Published in:

EFSA Journal, 2025, v. 23, n. 5, p. 1, doi. 10.2903/j.efsa.2025.9380

By:

Casacuberta, Josep;
Barro, Francisco;
Braeuning, Albert;
de Maagd, Ruud;
Epstein, Michelle M.;
Frenzel, Thomas;
Gallois, Jean‐Luc;
Koning, Frits;
Messéan, Antoine;
Moreno, F. Javier;
Nogué, Fabien;
Savoini, Giovanni;
Schulman, Alan H.;
Tebbe, Christoph;
Veromann, Eve;
Camargo, Ana M.;
Lenzi, Paolo;
Piffanelli, Pietro;
Raffaello, Tommaso

Publication type:

Article

Assessment of genetically modified oilseed rape MON 88302 for renewal authorisation under Regulation (EC) No 1829/2003 (dossier GMFF‐2023‐21220).

Published in:

EFSA Journal, 2025, v. 23, n. 5, p. 1, doi. 10.2903/j.efsa.2025.9378

By:

Casacuberta, Josep;
Barro, Francisco;
Braeuning, Albert;
de Maagd, Ruud;
Epstein, Michelle M.;
Frenzel, Thomas;
Gallois, Jean‐Luc;
Koning, Frits;
Messéan, Antoine;
Moreno, F. Javier;
Nogué, Fabien;
Savoini, Giovanni;
Schulman, Alan H.;
Tebbe, Christoph;
Veromann, Eve;
Camargo, Ana M.;
Lenzi, Paolo;
Piffanelli, Pietro;
Raffaello, Tommaso

Publication type:

Article

Assessment of genetically modified cotton MON 88913 for renewal authorisation under Regulation (EC) No 1829/2003 (dossier GMFF‐2023‐21234).

Published in:

EFSA Journal, 2025, v. 23, n. 5, p. 1, doi. 10.2903/j.efsa.2025.9377

By:

Casacuberta, Josep;
Barro, Francisco;
Braeuning, Albert;
de Maagd, Ruud;
Epstein, Michelle M.;
Frenzel, Thomas;
Gallois, Jean‐Luc;
Koning, Frits;
Messéan, Antoine;
Moreno, F. Javier;
Nogué, Fabien;
Savoini, Giovanni;
Schulman, Alan H.;
Tebbe, Christoph;
Veromann, Eve;
Camargo, Ana M.;
Lenzi, Paolo;
Piffanelli, Pietro;
Raffaello, Tommaso

Publication type:

Article

Sequence variation in the proximity of IDE may impact age at onset of both Parkinson disease and Alzheimer disease.

Published in:

Neurogenetics, 2004, v. 5, n. 2, p. 115, doi. 10.1007/s10048-004-0173-4

By:

Blomqvist, Mia E.-L.;
Silburn, Peter A.;
Buchanan, Daniel D.;
Andreasen, Niels;
Blennow, Kaj;
Pedersen, Nancy L.;
Brookes, Anthony J.;
Mellick, George D.;
Prince, Jonathan A.

Publication type:

Article

A novel missense ATP1A2 mutation in a Finnish family with familial hemiplegic migraine type 2.

Published in:

Neurogenetics, 2004, v. 5, n. 2, p. 141, doi. 10.1007/s10048-004-0178-z

By:

Kaunisto, M.A.;
Harno, H.;
Vanmolkot, K.R.J.;
Gargus, J.J.;
Sun, G.;
Hämäläinen, E.;
Liukkonen, E.;
Kallela, M.;
van den Maagdenberg, A.M.J.M.;
Frants, R.R.;
Färkkilä, M.;
Palotie, A.;
Wessman, M.

Publication type:

Article

Subunit asymmetry and roles of conformational switching in the hexameric AAA+ ring of ClpX.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 5, p. 411, doi. 10.1038/nsmb.3012

By:

Stinson, Benjamin M;
Baytshtok, Vladimir;
Schmitz, Karl R;
Baker, Tania A;
Sauer, Robert T

Publication type:

Article

DNA methylation: old dog, new tricks?

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 11, p. 949, doi. 10.1038/nsmb.2910

By:

Spruijt, Cornelia G;
Vermeulen, Michiel

Publication type:

Article

A protein-RNA specificity code enables targeted activation of an endogenous human transcript.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 8, p. 732, doi. 10.1038/nsmb.2847

By:

Campbell, Zachary T;
Valley, Cary T;
Wickens, Marvin

Publication type:

Article

The translational landscape of fission-yeast meiosis and sporulation.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 641, doi. 10.1038/nsmb.2843

By:

Duncan, Caia D S;
Mata, Juan

Publication type:

Article

Transcription-generated torsional stress destabilizes nucleosomes.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 1, p. 88, doi. 10.1038/nsmb.2723

By:

Teves, Sheila S;
Henikoff, Steven

Publication type:

Article