Works matching DE "METAGENOMICS"

Results: 5000

Endometrial microbiome in reproductive failure: The possibility of metagenomic analysis.

Published in:

Clinical & Experimental Reproductive Medicine, 2025, v. 52, n. 2, p. 107, doi. 10.5653/cerm.2024.07171

By:

Han, Ae Ra

Publication type:

Article

It Is Useless to Resist: Biofilms in Metalworking Fluid Systems.

Published in:

Life (2075-1729), 2025, v. 15, n. 6, p. 890, doi. 10.3390/life15060890

By:

von Känel, Giulia;
Steinmann, Lara Ylenia;
Mauz, Britta;
Lukesch, Robert;
Küenzi, Peter

Publication type:

Article

Tropheryma whipplei and Giardia intestinalis Co-Infection: Metagenomic Analysis During Infection and the Recovery Follow-Up.

Published in:

Infectious Disease Reports, 2025, v. 17, n. 3, p. 62, doi. 10.3390/idr17030062

By:

Anselmo, Anna;
Rizzo, Fabiana;
Gervasi, Elena;
Corrent, Luca;
Ciammaruconi, Andrea;
Fillo, Silvia;
Fortunato, Antonella;
Marella, Anna Maria;
Costantini, Silvia;
Baldassari, Luca;
Lista, Florigio;
Ciervo, Alessandra

Publication type:

Article

Bacterial evolution: An intriguing new bacterial phylum.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 8, p. 459, doi. 10.1038/nrmicro3534

By:

Attar, Naomi

Publication type:

Article

Dispersing misconceptions and identifying opportunities for the use of 'omics' in soil microbial ecology.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 7, p. 439, doi. 10.1038/nrmicro3468

By:

Prosser, James I.

Publication type:

Article

Sequencing and beyond: integrating molecular 'omics' for microbial community profiling.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 6, p. 360, doi. 10.1038/nrmicro3451

By:

Franzosa, Eric A.;
Hsu, Tiffany;
Sirota-Madi, Alexandra;
Shafquat, Afrah;
Abu-Ali, Galeb;
Morgan, Xochitl C.;
Huttenhower, Curtis

Publication type:

Article

Rising to the challenge: accelerated pace of discovery transforms marine virology.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 3, p. 147, doi. 10.1038/nrmicro3404

By:

Brum, Jennifer R.;
Sullivan, Matthew B.

Publication type:

Article

What is a resistance gene? Ranking risk in resistomes.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 2, p. 116, doi. 10.1038/nrmicro3399

By:

Martínez, José L.;
Coque, Teresa M.;
Baquero, Fernando

Publication type:

Article

Voyage to the bottom of the 'seaquence'.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 9, p. 597, doi. 10.1038/nrmicro3341

By:

Wash, Rachael;
Soria, Carmen Diaz

Publication type:

Article

Metagenomics: Why stop here?

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 7, p. 461, doi. 10.1038/nrmicro3300

By:

Nunes-Alves, Cláudio

Publication type:

Article

Adding genomic 'foliage' to the tree of life.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 2, p. 78, doi. 10.1038/nrmicro3203

By:

Walker, Alan

Publication type:

Article

Environmental microbiology: Exploring diversity with single-cell genomics.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 9, p. 598, doi. 10.1038/nrmicro3095

By:

Hofer, Ursula

Publication type:

Article

Competition sensing: the social side of bacterial stress responses.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 4, p. 285, doi. 10.1038/nrmicro2977

By:

Cornforth, Daniel M.;
Foster, Kevin R.

Publication type:

Article

Looking inwards.

Published in:: Nature Reviews Microbiology, 2013, v. 11, n. 3, p. 143, doi. 10.1038/nrmicro2987
Publication type:: Article

The microbiome explored: recent insights and future challenges.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 3, p. 213, doi. 10.1038/nrmicro2973

By:

Blaser, Martin;
Bork, Peer;
Fraser, Claire;
Knight, Rob;
Wang, Jun

Publication type:

Article

The cultural revolution.

Published in:: Nature Reviews Microbiology, 2013, v. 11, n. 1, p. 1, doi. 10.1038/nrmicro2948
Publication type:: Article

Metagenomics with guts.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 10, p. 674, doi. 10.1038/nrmicro2879

By:

Zarowiecki, Magdalena

Publication type:

Article

A day off in Denmark.

Published in:: Nature Reviews Microbiology, 2012, v. 10, n. 10, p. 667, doi. 10.1038/nrmicro2892
Publication type:: Article

Going viral: next-generation sequencing applied to phage populations in the human gut.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 9, p. 607, doi. 10.1038/nrmicro2853

By:

Reyes, Alejandro;
Semenkovich, Nicholas P.;
Whiteson, Katrine;
Rohwer, Forest;
Gordon, Jeffrey I.

Publication type:

Article

Microbial interactions: from networks to models.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 8, p. 538, doi. 10.1038/nrmicro2832

By:

Faust, Karoline;
Raes, Jeroen

Publication type:

Article

Welcome to the plasmidome.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 6, p. 379, doi. 10.1038/nrmicro2804

By:

Walker, Alan

Publication type:

Article

Where Next for Microbiome Research?

Published in:

PLoS Biology, 2015, v. 13, n. 1, p. 1, doi. 10.1371/journal.pbio.1002050

By:

Waldor, Matthew K.;
Tyson, Gene;
Borenstein, Elhanan;
Ochman, Howard;
Moeller, Andrew;
Finlay, B. Brett;
Kong, Heidi H.;
Gordon, Jeffrey I.;
Nelson, Karen E.;
Dabbagh, Karim;
Smith, Hamilton

Publication type:

Article

Challenges of metagenomics and single-cell genomics approaches for exploring cyanobacterial diversity.

Published in:

Photosynthesis Research, 2015, v. 126, n. 1, p. 135, doi. 10.1007/s11120-014-0066-9

By:

Davison, Michelle;
Hall, Eric;
Zare, Richard;
Bhaya, Devaki

Publication type:

Article

A genome analysis based on repeat sharing gene networks.

Published in:

Natural Computing, 2015, v. 14, n. 3, p. 403, doi. 10.1007/s11047-014-9437-6

By:

Castellini, Alberto;
Franco, Giuditta;
Milanese, Alessio

Publication type:

Article

Identification of Microbial Community in Otomycosis by Metagenomic Next Generation Sequencing (mNGS): Potential Implication of Treatment with Terbinafine.

Published in:

Mycopathologia, 2023, v. 188, n. 6, p. 995, doi. 10.1007/s11046-023-00791-5

By:

Xu, Shuai;
Zhang, Xin;
Yang, Qianqian;
Li, Jianfeng;
Yu, Zhaoyan

Publication type:

Article

Analysis of Black Fungal Biofilms Occurring at Domestic Water Taps (I): Compositional Analysis Using Tag-Encoded FLX Amplicon Pyrosequencing.

Published in:

Mycopathologia, 2013, v. 175, n. 5/6, p. 387, doi. 10.1007/s11046-013-9618-3

By:

Heinrichs, Guido;
Hübner, Iris;
Schmidt, Carsten;
Hoog, G.;
Haase, Gerhard

Publication type:

Article

Efficient control of dissolved and colloidal substances in raw papermaking whitewater by immobilized thermophilic esterase from a metagenomic library.

Published in:

Cellulose, 2024, v. 31, n. 7, p. 4053, doi. 10.1007/s10570-024-05881-1

By:

Xie, Qiuyue;
Zhang, Zedong

Publication type:

Article

High-throughput amplicon sequencing demonstrates extensive diversity of xylanase genes in the sediment of soda lake Dabusu.

Published in:

Biotechnology Letters, 2019, v. 41, n. 3, p. 409, doi. 10.1007/s10529-019-02646-w

By:

Wang, Guozeng;
Ren, Yaxin;
Ng, Tzi Bun;
Streit, Wolfgang R.;
Ye, Xiuyun

Publication type:

Article

Characterization of an inhibitor-resistant endo-1,4-β-mannanase from the gut microflora metagenome of Hermetia illucens.

Published in:

Biotechnology Letters, 2018, v. 40, n. 9/10, p. 1377, doi. 10.1007/s10529-018-2596-2

By:

Song, Jaeeun;
Kim, Su-Yeon;
Kim, Dae-Hyuk;
Lee, Young-Seok;
Sim, Joon-Soo;
Hahn, Bum-Soo;
Lee, Chang-Muk

Publication type:

Article

Primary exploring the value of metagenomic next‐generation sequencing in detecting pathogenic bacteria of cholangitis with biliary atresia after Kasai operation.

Published in:

Pediatric Surgery International, 2022, v. 38, n. 12, p. 1931, doi. 10.1007/s00383-022-05254-4

By:

Yu, Pu;
Li, Mengdi;
Sun, Rongjuan;
Zhan, Jianghua;
Pan, Yongkang

Publication type:

Article

Metagenomic views on taxonomic and functional profiles of the Himalayan Tsomgo cold lake and unveiling its deterzome potential.

Published in:

Current Genetics, 2022, v. 68, n. 5/6, p. 565, doi. 10.1007/s00294-022-01247-x

By:

Singh, Ashutosh Kumar;
Kumari, Megha;
Sharma, Nitish;
Rai, Amit Kumar;
Singh, Sudhir P.

Publication type:

Article

The metagenomics worldwide research.

Published in:

Current Genetics, 2017, v. 63, n. 5, p. 819, doi. 10.1007/s00294-017-0693-8

By:

Garrido-Cardenas, Jose;
Manzano-Agugliaro, Francisco

Publication type:

Article

Anaerobic digestion of chemically enhanced primary treatment (CEPT) sludge and the microbial community structure.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 20, p. 8975, doi. 10.1007/s00253-016-7730-2

By:

Ju, Feng;
Wang, Yubo;
Lau, Frankie;
Fung, W.;
Huang, Danping;
Xia, Yu;
Zhang, Tong

Publication type:

Article

Profile of microbial communities on carbonate stones of the medieval church of San Leonardo di Siponto (Italy) by Illumina-based deep sequencing.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 19, p. 8537, doi. 10.1007/s00253-016-7656-8

By:

Chimienti, Guglielmina;
Piredda, Roberta;
Pepe, Gabriella;
Werf, Inez;
Sabbatini, Luigia;
Crecchio, Carmine;
Ricciuti, Patrizia;
D'Erchia, Anna;
Manzari, Caterina;
Pesole, Graziano

Publication type:

Article

Applying theories of microbial metabolism for induction of targeted enzyme activity in a methanogenic microbial community at a metabolic steady state.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 18, p. 7989, doi. 10.1007/s00253-016-7547-z

By:

Speda, Jutta;
Johansson, Mikaela;
Jonsson, Bengt-Harald;
Karlsson, Martin

Publication type:

Article

Novel nitrifiers and comammox in a full-scale hybrid biofilm and activated sludge reactor revealed by metagenomic approach.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 18, p. 8225, doi. 10.1007/s00253-016-7655-9

By:

Chao, Yuanqing;
Mao, Yanping;
Yu, Ke;
Zhang, Tong

Publication type:

Article

Novel polyhydroxyalkanoate copolymers produced in Pseudomonas putida by metagenomic polyhydroxyalkanoate synthases.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 17, p. 7611, doi. 10.1007/s00253-016-7666-6

By:

Cheng, Jiujun;
Charles, Trevor

Publication type:

Article

Characterization of EST3: a metagenome-derived esterase with suitable properties for biotechnological applications.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 13, p. 5815, doi. 10.1007/s00253-016-7385-z

By:

Maester, Thaís;
Pereira, Mariana;
Machado Sierra, E.;
Balan, Andrea;
Lemos, Eliana

Publication type:

Article

Metagenomes reveal microbial structures, functional potentials, and biofouling-related genes in a membrane bioreactor.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 11, p. 5109, doi. 10.1007/s00253-016-7312-3

By:

Ma, Jinxing;
Wang, Zhiwei;
Li, Huan;
Park, Hee-Deung;
Wu, Zhichao

Publication type:

Article

Identification and characterization of a mesophilic phytase highly resilient to high-temperatures from a fungus-garden associated metagenome.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 5, p. 2225, doi. 10.1007/s00253-015-7097-9

By:

Tan, Hao;
Wu, Xiang;
Xie, Liyuan;
Huang, Zhongqian;
Peng, Weihong;
Gan, Bingcheng

Publication type:

Article

The effect of a high-roughage diet on the metabolism of aromatic compounds by rumen microbes: a metagenomic study using Mehsani buffalo ( Bubalus bubalis).

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 3, p. 1319, doi. 10.1007/s00253-015-7239-0

By:

Prajapati, Vimalkumar;
Purohit, Hemant;
Raje, Dhananjay;
Parmar, Nidhi;
Patel, Anand;
Jones, Oliver;
Joshi, Chaitanya

Publication type:

Article

Metagenomic analysis of microbial community in uranium-contaminated soil.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 1, p. 299, doi. 10.1007/s00253-015-7003-5

By:

Yan, Xun;
Luo, Xuegang;
Zhao, Min

Publication type:

Article

Metagenome approaches revealed a biological prospect for improvement on mesophilic cellulose degradation.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 24, p. 10871, doi. 10.1007/s00253-015-6945-y

By:

Wang, Yubo;
Xia, Yu;
Ju, Feng;
Zhang, Tong

Publication type:

Article

Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 23, p. 10031, doi. 10.1007/s00253-015-6873-x

By:

Placido, Antonio;
Hai, Tran;
Ferrer, Manuel;
Chernikova, Tatyana;
Distaso, Marco;
Armstrong, Dale;
Yakunin, Alexander;
Toshchakov, Stepan;
Yakimov, Michail;
Kublanov, Ilya;
Golyshina, Olga;
Pesole, Graziano;
Ceci, Luigi;
Golyshin, Peter

Publication type:

Article

Screening, identification, and characterization of a GH43 family β-xylosidase/α-arabinofuranosidase from a compost microbial metagenome.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 21, p. 8943, doi. 10.1007/s00253-015-6647-5

By:

Matsuzawa, Tomohiko;
Kaneko, Satoshi;
Yaoi, Katsuro

Publication type:

Article

Improved ethanol production from biomass by a rumen metagenomic DNA fragment expressed in Escherichia coli MS04 during fermentation.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 21, p. 9049, doi. 10.1007/s00253-015-6801-0

By:

Loaces, Inés;
Amarelle, Vanesa;
Muñoz-Gutierrez, Iván;
Fabiano, Elena;
Martinez, Alfredo;
Noya, Francisco

Publication type:

Article

Backbone structures in human milk oligosaccharides: trans-glycosylation by metagenomic β- N-acetylhexosaminidases.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 19, p. 7997, doi. 10.1007/s00253-015-6550-0

By:

Nyffenegger, Christian;
Nordvang, Rune;
Zeuner, Birgitte;
Łężyk, Mateusz;
Difilippo, Elisabetta;
Logtenberg, Madelon;
Schols, Henk;
Meyer, Anne;
Mikkelsen, Jørn

Publication type:

Article

A novel salt-tolerant chitobiosidase discovered by genetic screening of a metagenomic library derived from chitin-amended agricultural soil.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 19, p. 8199, doi. 10.1007/s00253-015-6639-5

By:

Cretoiu, Mariana;
Berini, Francesca;
Kielak, Anna;
Marinelli, Flavia;
Elsas, Jan

Publication type:

Article

Effect of temperature on removal of antibiotic resistance genes by anaerobic digestion of activated sludge revealed by metagenomic approach.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 18, p. 7771, doi. 10.1007/s00253-015-6688-9

By:

Zhang, Tong;
Yang, Ying;
Pruden, Amy

Publication type:

Article

Development of a growth-dependent selection system for identification of l-threonine aldolases.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 14, p. 5875, doi. 10.1007/s00253-014-6333-z

By:

Bulut, Dalia;
Gröger, Harald;
Hummel, Werner

Publication type:

Article