Works about GENE regulatory networks
Results: 5000
Unveiling novel susceptibility genes and drug targets for basal cell carcinoma by a cross-tissue transcriptome-wide association study.
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- Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02019-y
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- Article
New insights into the transcription factor regulatory networks driving peel coloration under hormone induction analyzed by transcriptomics and metabolomics in tangor 'Murcot'.
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- Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1526733
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- Article
Dynamic changes in the transcriptome of tropical region-originated king grasses in response to cold stress.
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- Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1511466
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- Article
Corrigendum: Construction of a circRNA–lincRNA–lncRNA–miRNA–mRNA ceRNA regulatory network identifies genes and pathways linked to goat fertility.
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- 2025
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- Correction Notice
Identification of cancer-associated fibroblast signature genes for prognostic prediction in colorectal cancer.
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- Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1476092
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- Article
Multi-omics analysis reveals the molecular mechanisms and therapeutic targets in high altitude polycythemia.
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- Annales de Biologie Clinique, 2025, v. 83, n. 1, p. 20, doi. 10.1684/abc.2025.1945
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- Article
Graph contrastive learning of subcellular-resolution spatial transcriptomics improves cell type annotation and reveals critical molecular pathways.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbaf020
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- Article
TRIAGE: an R package for regulatory gene analysis.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbaf004
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- Article
Predictive modelling of acute Promyelocytic leukaemia resistance to retinoic acid therapy.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbaf002
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- Article
Towards simplified graph neural networks for identifying cancer driver genes in heterophilic networks.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbae691
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- Article
Online-adjusted evolutionary biclustering algorithm to identify significant modules in gene expression data.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbae681
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- Article
CDCM: a correlation-dependent connectivity map approach to rapidly screen drugs during outbreaks of infectious diseases.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbae659
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- Article
A self-attention-driven deep learning framework for inference of transcriptional gene regulatory networks.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbae639
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- Article
BioDSNN: a dual-stream neural network with hybrid biological knowledge integration for multi-gene perturbation response prediction.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbae617
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- Article
TriTan: an efficient triple nonnegative matrix factorization method for integrative analysis of single-cell multiomics data.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbae615
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- Article
Identification of key genes and signaling pathway in the pathogenesis of Huntington's disease via bioinformatics and next generation sequencing data analysis.
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- Egyptian Journal of Medical Human Genetics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s43042-025-00660-4
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- Article
Modelling of miRNA-mRNA Network to Identify Gene Signatures with Diagnostic and Prognostic Value in Gastric Cancer: Evidence from In-Silico and In-Vitro Studies.
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- Reports of Biochemistry & Molecular Biology, 2024, v. 13, n. 2, p. 281, doi. 10.61186/rbmb.13.2.281
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- Article
Modeling hydraulic jump roller length on rough beds: a comparative study of ANN and GEP models.
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- Umm Al-Qura University Journal of Engineering & Architecture (Springer Nature), 2025, v. 16, n. 1, p. 111, doi. 10.1007/s43995-024-00093-x
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- Article
Comprehensive analysis of immunogenic cell death-related genes in liver ischemia-reperfusion injury.
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- Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1545185
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- Article
Construction of a circRNA– lincRNA–lncRNA–miRNA–mRNA ceRNA regulatory network identifies genes and pathways linked to goat fertility.
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- Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2023.1195480
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- Publication type:
- Article
Neural Network Moment Closure Method for Markovian Gene Expression Modeling.
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- Journal of East China University of Science & Technology, 2025, v. 51, n. 1, p. 70, doi. 10.14135/j.cnki.1006-3080.20240227001
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- Article
STModule: identifying tissue modules to uncover spatial components and characteristics of transcriptomic landscapes.
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- Genome Medicine, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13073-025-01441-9
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- Article
Transcriptome analyses for revealing leaf abscission of Cyclocarya paliurus stem segments in vitro.
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- BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11394-3
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- Article
Leveraging prior knowledge to infer gene regulatory networks from single-cell RNA-sequencing data.
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- Molecular Systems Biology, 2025, v. 21, n. 3, p. 214, doi. 10.1038/s44320-025-00088-3
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- Article
Regulatory variation controlling architectural pleiotropy in maize.
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- Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56884-w
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- Article
心肌梗死患者细胞焦亡相关基因的表达水平及临床意义.
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- Progress in Modern Biomedicine, 2025, v. 25, n. 2, p. 372, doi. 10.13241/j.cnki.pmb.2025.02.022
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- Article
阿尔茨海默病患者海马中与学习记忆相关的枢纽基因鉴定 及机制分析.
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- Progress in Modern Biomedicine, 2025, v. 25, n. 1, p. 174, doi. 10.13241/j.cnki.pmb.2025.01.025
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- Article
Mutagenicity and carcinogenicity prediction of sugar substitutes: an in silico approach with compound-gene interactions network.
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- Toxicology Research, 2025, v. 14, n. 1, p. 1, doi. 10.1093/toxres/tfaf008
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- Article
Bioinformatics analysis of shared biomarkers and immune pathways of preeclampsia and periodontitis.
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- BMC Pregnancy & Childbirth, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12884-025-07277-w
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- Article
Comparative transcriptome analysis reveals potential regulatory genes involved in the development and strength formation of maize stalks.
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- BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06276-5
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- Article
Screening of common genomic biomarkers to explore common drugs for the treatment of pancreatic and kidney cancers with type-2 diabetes through bioinformatics analysis.
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- Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-91875-3
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- Article
An Integration of RNA Sequencing and Network Pharmacology Approaches Predicts the Molecular Mechanisms of the Huo-Xue-Shen Formula in the Treatment of Liver Fibrosis.
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- Pharmaceuticals (14248247), 2025, v. 18, n. 2, p. 227, doi. 10.3390/ph18020227
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- Article
Unveiling Racial Disparities in Localized Prostate Cancer: A Systems-Level Exploration of the lncRNA Landscape.
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- Genes, 2025, v. 16, n. 2, p. 229, doi. 10.3390/genes16020229
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- Article
Identification and Expression Patterns of Critical Genes Related to Coat Color in Cashmere Goats.
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- Genes, 2025, v. 16, n. 2, p. 222, doi. 10.3390/genes16020222
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- Article
Unveiling Photoperiod-Responsive Regulatory Networks in Tropical Maize Through Transcriptome Analysis.
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- Genes, 2025, v. 16, n. 2, p. 192, doi. 10.3390/genes16020192
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- Article
Transcriptional Regulatory Network of the Embryonic Diapause Termination Process in Artemia.
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- Genes, 2025, v. 16, n. 2, p. 175, doi. 10.3390/genes16020175
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- Article
Decoding the Dialog Between Plants and Arbuscular Mycorrhizal Fungi: A Molecular Genetic Perspective.
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- Genes, 2025, v. 16, n. 2, p. 143, doi. 10.3390/genes16020143
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- Article
Integration of GWAS and Co-Expression Network Analysis Identified Main Genes Responsible for Nitrogen Uptake Traits in Seedling Waxy Corn.
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- Genes, 2025, v. 16, n. 2, p. 126, doi. 10.3390/genes16020126
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- Article
RNA Metabolism and the Role of Small RNAs in Regulating Multiple Aspects of RNA Metabolism.
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- Non-Coding RNA, 2025, v. 11, n. 1, p. 1, doi. 10.3390/ncrna11010001
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- Article
A novel classification method for LUAD that guides personalized immunotherapy on the basis of the cross-talk of coagulation- and macrophage-related genes.
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- Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1518102
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- Article
Widely Targeted Metabolomics and Transcriptomics Analysis of the Response and Adaptation Mechanisms of Trifolium ambiguum to Low-Temperature Stress.
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- Agronomy, 2025, v. 15, n. 2, p. 308, doi. 10.3390/agronomy15020308
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- Article
Identification of Lipophagy-Related Gene Signature for Diagnosis and Risk Prediction of Alzheimer's Disease.
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- Biomedicines, 2025, v. 13, n. 2, p. 362, doi. 10.3390/biomedicines13020362
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- Article
Identification of Common Angiogenesis Marker Genes in Chronic Lung Diseases and Their Relationship with Immune Infiltration Based on Bioinformatics Approaches.
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- Biomedicines, 2025, v. 13, n. 2, p. 331, doi. 10.3390/biomedicines13020331
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- Article
Selection of Key Genes for Apricot Kernel Oil Synthesis Based on Transcriptome Analysis.
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- Foods, 2025, v. 14, n. 4, p. 568, doi. 10.3390/foods14040568
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- Article
自主运动对小鼠海马分子表达特征影响：基于 GEO 数据库基因表达谱分析.
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- Chinese Journal of Tissue Engineering Research / Zhongguo Zuzhi Gongcheng Yanjiu, 2025, v. 29, n. 24, p. 5237, doi. 10.12307/2025.723
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- Article
Exploring Hormonal Pathways and Gene Networks in Crown Root Formation Under Stress Conditions: An Update.
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- Plants (2223-7747), 2025, v. 14, n. 4, p. 630, doi. 10.3390/plants14040630
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- Article
Comprehensive Analysis of Hormonal Signaling Pathways and Gene Expression in Flesh Segment Development of Chinese Bayberry (Myrica rubra).
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- Plants (2223-7747), 2025, v. 14, n. 4, p. 571, doi. 10.3390/plants14040571
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- Article
Transcriptomic Analysis Reveals That the Photosynthesis and Carotenoid Metabolism Pathway Is Involved in the Salinity Stress Response in Brassica rapa L. ssp. Pekinensis.
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- Plants (2223-7747), 2025, v. 14, n. 4, p. 566, doi. 10.3390/plants14040566
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- Article
Improvement in Nitrogen-Use Efficiency Increases Salt Stress Tolerance in Rice Seedlings and Grain Yield in Salinized Soil.
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- Plants (2223-7747), 2025, v. 14, n. 4, p. 556, doi. 10.3390/plants14040556
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- Article
Transcriptome Analysis Revealed Hub Genes Related to Tipburn Resistance in Chinese Cabbage (Brassica rapa L. ssp. pekinensis).
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- Plants (2223-7747), 2025, v. 14, n. 4, p. 527, doi. 10.3390/plants14040527
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- Article