Works matching DE "COMPARATIVE genomics"

Results: 4387

Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030015

By:

Fouts, Derrick E;
Mongodin, Emmanuel F;
Mandrell, Robert E;
Miller, William G;
Rasko, David A;
Ravel, Jacques;
Brinkac, Lauren M;
DeBoy, Robert T;
Parker, Craig T;
Daugherty, Sean C;
Dodson, Robert J;
Durkin, A. Scott;
Madupu, Ramana;
Sullivan, Steven A;
Shetty, Jyoti U;
Ayodeji, Mobolanle A;
Shvartsbeyn, Alla;
Schatz, Michael C;
Badger, Jonathan H;
Fraser, Claire M

Publication type:

Article

Sorghum Genome Sequencing by Methylation Filtration.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030013

By:

Bedell, Joseph A;
Budiman, Muhammad A;
Nunberg, Andrew;
Citek, Robert W;
Robbins, Dan;
Jones, Joshua;
Flick, Elizabeth;
Rohlfing, Theresa;
Fries, Jason;
Bradford, Kourtney;
McMenamy, Jennifer;
Smith, Michael;
Holeman, Heather;
Roe, Bruce A;
Wiley, Graham;
Korf, Ian F;
Rabinowicz, Pablo D;
Lakey, Nathan;
McCombie, W. Richard;
Jeddeloh, Jeffrey A

Publication type:

Article

A Model of the Statistical Power of Comparative Genome Sequence Analysis.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030010

By:

Eddy, Sean R

Publication type:

Article

Highly Conserved Non-Coding Sequences Are Associated with Vertebrate Development.

Published in:

PLoS Biology, 2004, v. 2, n. 11, p. 1, doi. 10.1371/journal.pbio.0030007

By:

Woolfe, Adam;
Goodson, Martin;
Goode, Debbie K;
Snell, Phil;
McEwen, Gayle K;
Vavouri, Tanya;
Smith, Sarah F;
North, Phil;
Callaway, Heather;
Kelly, Krys;
Walter, Klaudia;
Abnizova, Irina;
Gilks, Walter;
Edwards, Yvonne J. K;
Cooke, Julie E;
Elgar, Greg

Publication type:

Article

Lineage-Specific Gene Duplication and Loss in Human and Great Ape Evolution.

Published in:

PLoS Biology, 2004, v. 2, n. 7, p. 1, doi. 10.1371/journal.pbio.0020207

By:

Fortna, Andrew;
Kim, Young;
MacLaren, Erik;
Marshall, Kriste;
Hahn, Gretchen;
Meltesen, Lynne;
Brenton, Matthew;
Hink, Raquel;
Burgers, Sonya;
Hernandez-Boussard, Tina;
Karimpour-Fard, Anis;
Glueck, Deborah;
McGavran, Loris;
Berry, Rebecca;
Pollack, Jonathan;
Sikela, James M

Publication type:

Article

Phylogenomics of the Reproductive Parasite Wolbachia pipientis wMel: A Streamlined Genome Overrun by Mobile Genetic Elements.

Published in:

PLoS Biology, 2004, v. 2, n. 3, p. 1, doi. 10.1371/journal.pbio.0020069

By:

Wu, Martin;
Sun, Ling V;
Vamathevan, Jessica;
Riegler, Markus;
Deboy, Robert;
Brownlie, Jeremy C;
McGraw, Elizabeth A;
Martin, William;
Esser, Christian;
Ahmadinejad, Nahal;
Wiegand, Christian;
Madupu, Ramana;
Beanan, Maureen J;
Brinkac, Lauren M;
Daugherty, Sean C;
Durkin, A. Scott;
Kolonay, James F;
Nelson, William C;
Mohamoud, Yasmin;
Lee, Perris

Publication type:

Article

Similarities and Differences in Genome-Wide Expression Data of Six Organisms.

Published in:

PLoS Biology, 2003, v. 1, n. 12, p. 1, doi. 10.1371/journal.pbio.0020009

By:

Bergmann, Sven;
Ihmels, Jan;
Barkai, Naama

Publication type:

Article

Comparative Genomics.

Published in:

PLoS Biology, 2003, v. 1, n. 11, p. 1, doi. 10.1371/journal.pbio.0000058

By:

Hardison, Ross C

Publication type:

Article

The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics.

Published in:

PLoS Biology, 2003, v. 1, n. 11, p. 1, doi. 10.1371/journal.pbio.0000045

By:

Stein, Lincoln D;
Bao, Zhirong;
Blasiar, Darin;
Blumenthal, Thomas;
Brent, Michael R;
Chen, Nansheng;
Chinwalla, Asif;
Clarke, Laura;
Clee, Chris;
Coghlan, Avril;
Coulson, Alan;
D'Eustachio, Peter;
Fitch, David H. A;
Fulton, Lucinda A;
Fulton, Robert E;
Griffiths-Jones, Sam;
Harris, Todd W;
Hillier, LaDeana W;
Kamath, Ravi;
Kuwabara, Patricia E

Publication type:

Article

Phylogenetic analysis and molecular signatures defining a monophyletic clade of heterocystous cyanobacteria and identifying its closest relatives.

Published in:

Photosynthesis Research, 2014, v. 122, n. 2, p. 171, doi. 10.1007/s11120-014-0020-x

By:

Howard-Azzeh, Mohammad;
Shamseer, Larissa;
Schellhorn, Herb;
Gupta, Radhey

Publication type:

Article

The GreenCut: re-evaluation of physiological role of previously studied proteins and potential novel protein functions.

Published in:

Photosynthesis Research, 2013, v. 116, n. 2/3, p. 427, doi. 10.1007/s11120-013-9882-6

By:

Heinnickel, Mark;
Grossman, Arthur

Publication type:

Article

Comparative Genomics and Molecular Analysis of Epidermophyton floccosum.

Published in:

Mycopathologia, 2021, v. 186, n. 4, p. 487, doi. 10.1007/s11046-021-00567-9

By:

Liu, Jia;
Ge, Liyu;
Mei, Huan;
Zheng, Hailin;
Peng, Jingwen;
Liang, Guanzhao;
Liu, Weida

Publication type:

Article

Complete Genome Sequence of Penicillium oxalicum Strain SGAir0226 Isolated from Outdoor Tropical Air in Singapore.

Published in:

Mycopathologia, 2020, v. 185, n. 3, p. 591, doi. 10.1007/s11046-019-00422-y

By:

Gupta, Anjali Bansal;
Gaultier, Nicolas E.;
Aung, Ngu War;
Purbojati, Rikky W.;
Oliveira, Elaine L.;
Wong, Anthony;
Panicker, Deepa;
Putra, Alexander;
Uchida, Akira;
Drautz-Moses, Daniela I.;
Schuster, Stephan C.

Publication type:

Article

Cryptococcus gattii Comparative Genomics and Transcriptomics: A NIH/NIAID White Paper.

Published in:

Mycopathologia, 2012, v. 173, n. 5/6, p. 367, doi. 10.1007/s11046-011-9512-9

By:

Chaturvedi, V.;
Nierman, W.

Publication type:

Article

Molecular cytogenetic map of the central bearded dragon, Pogona vitticeps (Squamata: Agamidae).

Published in:

Chromosome Research, 2013, v. 21, n. 4, p. 361, doi. 10.1007/s10577-013-9362-z

By:

Young, M.;
O'Meally, D.;
Sarre, S.;
Georges, A.;
Ezaz, T.

Publication type:

Article

A ZZ/ZW microchromosome system in the spiny softshell turtle, Apalone spinifera, reveals an intriguing sex chromosome conservation in Trionychidae.

Published in:

Chromosome Research, 2013, v. 21, n. 2, p. 137, doi. 10.1007/s10577-013-9343-2

By:

Badenhorst, Daleen;
Stanyon, Roscoe;
Engstrom, Tag;
Valenzuela, Nicole

Publication type:

Article

Breaking resistance: in silico subtractive and comparative genomics approaches for drug targeting in Bacteroides fragilis.

Published in:

Biotechnology Letters, 2024, v. 46, n. 6, p. 1249, doi. 10.1007/s10529-024-03537-5

By:

Zia, Tehreem;
Khan, Kanwal;
Aghayeva, Saltanat;
Uddin, Reaz

Publication type:

Article

Integrated bioinformatics based subtractive genomics approach to decipher the therapeutic function of hypothetical proteins from Salmonella typhi XDR H-58 strain.

Published in:

Biotechnology Letters, 2022, v. 44, n. 2, p. 279, doi. 10.1007/s10529-021-03219-6

By:

Khan, Kanwal;
Uddin, Reaz

Publication type:

Article

Comparative transcriptome analysis of genomic region deletion strain with enhanced l-tyrosine production in Saccharomyces cerevisiae.

Published in:

Biotechnology Letters, 2020, v. 42, n. 3, p. 453, doi. 10.1007/s10529-019-02784-1

By:

Wu, Yuzhen;
Cai, Miao;
Song, Xiaofei;
Li, Yuanzi;
Wang, Hesuiyuan;
Mao, Jiwei;
Liu, Quanli;
Xu, Haijin;
Qiao, Mingqiang

Publication type:

Article

Characterization and organization of telomeric-linked helicase (tlh) gene families in Fusarium oxysporum.

Published in:

Current Genetics, 2024, v. 70, n. 1, p. 1, doi. 10.1007/s00294-024-01303-8

By:

Salimi, Sahar;
Abdi, M. Foad;
Rahnama, Mostafa

Publication type:

Article

Genomic insights into the diversity of non-coding RNAs in Bacillus cereus sensu lato.

Published in:

Current Genetics, 2022, v. 68, n. 3/4, p. 449, doi. 10.1007/s00294-022-01240-4

By:

Gonçalves, Kátia B.;
Appel, Renan J. Casarotto;
Bôas, Laurival A. Vilas;
Cardoso, Priscilla F.;
Bôas, Gislayne T. Vilas

Publication type:

Article

Biological and genomic analyses of a clinical isolate of Yarrowia galli from China.

Published in:

Current Genetics, 2020, v. 66, n. 3, p. 549, doi. 10.1007/s00294-019-01046-x

By:

Bing, Jian;
You, Zimeng;
Zheng, Qiushi;
Tang, Jiaoqing;
Ran, Yuping;
Huang, Guanghua

Publication type:

Article

Comparative genomics of Paracoccus sp. SM22M-07 isolated from coral mucus: insights into bacteria-host interactions.

Published in:

Current Genetics, 2017, v. 63, n. 3, p. 509, doi. 10.1007/s00294-016-0658-3

By:

Carlos, Camila;
Pereira, Letícia;
Ottoboni, Laura

Publication type:

Article

(Actino)Bacterial 'intelligence': using comparative genomics to unravel the information processing capacities of microbes.

Published in:

Current Genetics, 2016, v. 62, n. 3, p. 487, doi. 10.1007/s00294-016-0569-3

By:

Pinto, Daniela;
Mascher, Thorsten

Publication type:

Article

Metabolic pathway of 3,6-anhydro-D-galactose in carrageenan-degrading microorganisms.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 9, p. 4109, doi. 10.1007/s00253-016-7346-6

By:

Lee, Sun;
Kim, Jeong;
Lim, Hyun

Publication type:

Article

Metagenomic analysis of the microbial community in fermented grape marc reveals that Lactobacillus fabifermentans is one of the dominant species: insights into its genome structure.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 13, p. 6015, doi. 10.1007/s00253-014-5795-3

By:

Campanaro, Stefano;
Treu, Laura;
Vendramin, Veronica;
Bovo, Barbara;
Giacomini, Alessio;
Corich, Viviana

Publication type:

Article

Comparative genomic and transcriptomic analyses of NaCl-tolerant Staphylococcus sp. OJ82 isolated from fermented seafood.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 2, p. 807, doi. 10.1007/s00253-013-5436-2

By:

Choi, Sungjong;
Jung, Jaejoon;
Jeon, Che;
Park, Woojun

Publication type:

Article

Characterization of four TCE-dechlorinating microbial enrichments grown with different cobalamin stress and methanogenic conditions.

Published in:

Applied Microbiology & Biotechnology, 2013, v. 97, n. 14, p. 6439, doi. 10.1007/s00253-013-4896-8

By:

Men, Yujie;
Lee, Patrick;
Harding, Katie;
Alvarez-Cohen, Lisa

Publication type:

Article

An updated view of the oligosaccharyltransferase complex in Plasmodium.

Published in:

Glycobiology, 2019, v. 29, n. 5, p. 385, doi. 10.1093/glycob/cwz011

By:

Tamana, Stella;
Promponas, Vasilis J

Publication type:

Article

Multiomic approaches reveal novel lineage-specific effectors in the potato and tomato early blight pathogen Alternaria solani.

Published in:

Phytopathology Research, 2022, v. 4, n. 1, p. 1, doi. 10.1186/s42483-022-00135-z

By:

Wang, Jinhui;
Xiao, Siyu;
Zheng, Lijia;
Pan, Yang;
Zhao, Dongmei;
Zhang, Dai;
Li, Qian;
Zhu, Jiehua;
Yang, Zhihui

Publication type:

Article

Comparative genomics of Xanthomonas fragariae and Xanthomonas arboricola pv. fragariae reveals intra- and interspecies variations.

Published in:

Phytopathology Research, 2020, v. 2, n. 1, p. 1, doi. 10.1186/s42483-020-00061-y

By:

Gétaz, Michael;
Blom, Jochen;
Smits, Theo H. M.;
Pothier, Joël F.

Publication type:

Article

Author Correction: Comparative genomics reveal a novel phylotaxonomic order in the genus Fusobacterium.

Published in:

2025

By:

Molteni, Cristian;
Forni, Diego;
Cagliani, Rachele;
Sironi, Manuela

Publication type:

Correction Notice

Improved production of clavulanic acid by reverse engineering and overexpression of the regulatory genes in an industrial Streptomyces clavuligerus strain.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 8, p. 1205, doi. 10.1007/s10295-019-02196-0

By:

Cho, Hang Soo;
Jo, Jin Chul;
Shin, Chang-Hun;
Lee, Namil;
Choi, Joon-Sun;
Cho, Byung-Kwan;
Roe, Jung-Hye;
Kim, Chan-Wha;
Kwon, Ho Jeong;
Yoon, Yeo Joon

Publication type:

Article

Influence of R and S enantiomers of 1-octen-3-ol on gene expression of Penicillium chrysogenum.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 7, p. 977, doi. 10.1007/s10295-019-02168-4

By:

Yin, Guohua;
Zhang, Yuliang;
Fu, Maojie;
Hua, Sui Sheng T.;
Huang, Qixing;
Pennerman, Kayla K.;
Wu, Guangxi;
Jurick II, Wayne M.;
Lee, Samantha;
Bu, Lijing;
Zhao, Hui;
Bennett, Joan W.

Publication type:

Article

Comparison of gal–lac operons in wild-type galactose-positive and -negative Streptococcus thermophilus by genomics and transcription analysis.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2019, v. 46, n. 5, p. 751, doi. 10.1007/s10295-019-02145-x

By:

Xiong, Zhi-Qiang;
Kong, Ling-Hui;
Meng, Hai-Lin;
Cui, Jin-Ming;
Xia, Yong-Jun;
Wang, Shi-Jie;
Ai, Lian-Zhong

Publication type:

Article

A novel aceE mutation leading to a better growth profile and a higher l-serine production in a high-yield l-serine-producing Corynebacterium glutamicum strain.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2016, v. 43, n. 9, p. 1293, doi. 10.1007/s10295-016-1801-3

By:

Guo, Wen;
Chen, Ziwei;
Zhang, Xiaomei;
Xu, Guoqiang;
Zhang, Xiaojuan;
Shi, Jinsong;
Xu, Zhenghong

Publication type:

Article

2 株伪狂犬病毒变异株全基因组测序及主要保护性抗原氨基酸变异分析.

Published in:

Journal of Henan Agricultural Sciences, 2021, v. 50, n. 8, p. 146, doi. 10.15933/j.cnki.1004‑3268.2021.08.017

By:

郭振华;
邢广旭;
翁茂洋;
金前跃;
乔松林;
张改平

Publication type:

Article

禽腺病毒4 型ZZ 株的分离鉴定及系统进化分析.

Published in:

Journal of Henan Agricultural Sciences, 2020, v. 49, n. 11, p. 128, doi. 10.15933/j.cnki.1004-3268.2020.11.016

By:

金前跃;
王寅彪;
柴永笑;
卢清侠;
李鹏;
郭振华;
邢广旭;
邓瑞广;
张改平

Publication type:

Article

高粱 COBRA 基因家族全基因组的鉴定和表达分析.

Published in:

Journal of Henan Agricultural Sciences, 2020, v. 49, n. 10, p. 33, doi. 10.15933/j.cnki.1004-3268.2020.10.005

By:

元志成;
柯余生;
吴富进;
王建平;
肖乃衍

Publication type:

Article

烟草棒状弯孢菌线粒体全基因组特征及系统发育分析.

Published in:

Mycosystema, 2023, v. 42, n. 12, p. 2407, doi. 10.13346/j.mycosystema.230148

By:

曹毅;
陈代荣;
李治模;
张明娅;
何世芳;
陆宁

Publication type:

Article

两个糙皮侧耳菌株的比较基因组学研究.

Published in:

Mycosystema, 2019, v. 38, n. 12, p. 2133, doi. 10.13346/j.mycosystema.190237

By:

王丽宁;
赵梦然;
邬向丽;
黄晨阳;
曲积彬

Publication type:

Article

Transcriptomic analysis of cytochrome P450 genes and pathways involved in chromium toxicity in Oryza sativa.

Published in:

Ecotoxicology, 2020, v. 29, n. 5, p. 503, doi. 10.1007/s10646-019-02046-w

By:

Yu, Xiao-Zhang;
Lu, Chun-Jiao;
Tang, Shen;
Zhang, Qing

Publication type:

Article

A comprehensive description and evolutionary analysis of 9 Loliginidae mitochondrial genomes.

Published in:

Hydrobiologia, 2018, v. 808, n. 1, p. 115, doi. 10.1007/s10750-017-3377-y

By:

Jiang, Lihua;
Kang, Lishen;
Wu, Changwen;
Chen, Ming;
Lü, Zhenming

Publication type:

Article

P11 - Comparative genomics and phylogenetic analysis of Vitis vinifera: insides from the complete plastid genome sequences.

Published in:

Julius-Kühn-Archiv, 2022, n. 470, p. 92

By:

Pipia, Ia;
Tabidze, Vazha;
Bezhashvili, Mari;
Gujabidze, Ana;
Nozadze, Tengiz;
Zhorzholiani, Natia;
Lacombe, Thiery

Publication type:

Article

The complete chloroplast genome of Syzygium zeylanicum (Myrtaceae, Myrtales) and its phylogenetic analysis.

Published in:

Mitochondrial DNA: Resources, 2024, v. 9, n. 12, p. 1642, doi. 10.1080/23802359.2024.2435905

By:

Thi Huynh, Thu-Thao;
Quang, Minh Trong;
Nguyen, Hoang Danh

Publication type:

Article

The complete mitochondrial genome of the rice blast fungus Pyricularia oryzae Cavara 1892 strain Guy11 and phylogenetic analysis.

Published in:

Mitochondrial DNA: Resources, 2023, v. 8, n. 10, p. 1036, doi. 10.1080/23802359.2023.2260043

By:

Xu, Fei;
Liu, Xiaohong;
Wang, Jiaoyu

Publication type:

Article

The chloroplast genome characteristics, comparative genomics and gene resource mining of Celtis sinensis (Persoon, 1805).

Published in:

Mitochondrial DNA: Resources, 2022, v. 7, n. 4, p. 698, doi. 10.1080/23802359.2022.2067013

By:

Fan, Jing;
Chen, Yan;
Luo, MingHua;
Liang, Zi;
Nong, Xiang

Publication type:

Article

Analysis of the complete chloroplast genomes of Scutellaria tsinyunensis and Scutellaria tuberifera (Lamiaceae).

Published in:

Mitochondrial DNA: Resources, 2021, v. 6, n. 9, p. 2672, doi. 10.1080/23802359.2021.1920491

By:

Shan, Yuanyu;
Pei, Xiaoying;
Yong, Shunyuan;
Li, Jingling;
Qin, Qiulin;
Zeng, Siyuan;
Yu, Jie

Publication type:

Article

The complete mitochondrial genome of the pyrophilous jewel beetle Melanophila acuminata (Coleoptera: Buprestidae).

Published in:

Mitochondrial DNA: Resources, 2021, v. 6, n. 3, p. 1059, doi. 10.1080/23802359.2021.1899079

By:

Xujian Peng;
Jing Liu;
Zheng Wang;
Qingbin Zhan

Publication type:

Article

The complete mitochondrial genome of the Rana sangzhiensis Shen and its phylogenetic analyses.

Published in:

Mitochondrial DNA: Resources, 2021, v. 6, n. 2, p. 329, doi. 10.1080/23802359.2020.1866454

By:

Gang Xiong;
Hui Jiang;
Xiao-Qing Wang;
Li Kang;
Li Liu;
Xian-Wen Zhou;
Pei Wang;
Tao Yang

Publication type:

Article