Works about BIOINFORMATICS

Results: 5000

Comparative Genome Analysis of Three Halobacillus Strains Isolated From Saline Environments Reveal Potential Salt Tolerance and Algicidal Mechanisms.

Published in:

Environmental Microbiology Reports, 2025, v. 17, n. 3, p. 1, doi. 10.1111/1758-2229.70121

By:

Gurung, Saru;
Lee, Chang‐Muk;
Weon, Hang‐Yeon;
Han, So‐Ra;
Oh, Tae‐Jin

Publication type:

Article

Transcriptome analysis and temporal expression patterns of wing development-related genes in Lymantria dispar (Lepidoptera: Erebidae).

Published in:

Environmental Entomology, 2025, v. 54, n. 3, p. 654, doi. 10.1093/ee/nvae111

By:

Dou, Fengrui;
Ji, Wenzhuai;
Xie, Qing;
Wang, Jingyu;
Cao, Yixia;
Shi, Juan

Publication type:

Article

Mediation of DNA methylation (cg04622888 and cg05037505) in the association between childhood maltreatment and non-suicidal self-injury in early adolescents.

Published in:

European Child & Adolescent Psychiatry, 2025, v. 34, n. 6, p. 1861, doi. 10.1007/s00787-024-02600-w

By:

Li, Yanqi;
Guo, Shuangshuang;
Xie, Xinyi;
Zhang, Yi;
Jiao, Ting;
Wu, Yibo;
Ma, Ying;
Chen, Runsen;
Chen, Ruoling;
Yu, Yizhen;
Tang, Jie

Publication type:

Article

Numerical study of transient aerodynamic forces acting on a ski jumper considering dynamic posture change from takeoff to landing.

Published in:

Sports Biomechanics, 2025, v. 24, n. 3, p. 763, doi. 10.1080/14763141.2022.2154256

By:

Yamamoto, Keizo;
Nishino, Takahiro;
Bale, Rahul;
Shimada, Tokimasa;
Miyamoto, Naoto;
Tsubokura, Makoto

Publication type:

Article

Investigation of anti-cardiac hypertrophy effects of Andrographis paniculata ethanolic extract by modulating proinflammation and oxidative stress via Nrf2/NF-ĸB/NLRP3 signaling pathway: In silico and in vitro approaches.

Published in:

Journal of Applied Pharmaceutical Science, 2025, v. 15, n. 6, p. 277, doi. 10.7324/JAPS.2025.226923

By:

Fadhillah, Muhamad Rizqy;
Wibowo, Heri;
Bustami, Arleni;
Sukmawati, Dewi;
Tedjo, Aryo;
Khatimah, Nurul Gusti;
Shimizu, Ippei;
Arozal, Wawaimuli

Publication type:

Article

Design and evaluation of siRNA molecules targeting conserved UL15 sequence in the HSV genome: An in silico and in vitro study.

Published in:

Journal of Applied Pharmaceutical Science, 2025, v. 15, n. 6, p. 128, doi. 10.7324/JAPS.2025.228650

By:

Rao, Archana Mahadev;
Mohammad, Fayaz Shaik;
Somashekara, Divyashree Mysore;
Rahangdale, Rakesh R.;
Patil, Sanskruti Shrenik;
Hariharapura, Raghu Chandrashekhar

Publication type:

Article

Identification and validation of the fibrosis-related molecular subtypes of hepatocellular carcinoma by bioinformatics.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02964-8

By:

Liu, Ling-li;
Cao, Wei-lin;
Chen, Jian-sheng;
Wang, Jian-ping

Publication type:

Article

SCHEDULING MOTIF FINDING PROBLEM ACROSS HETEROGENEOUS CPU ARCHITECTURES.

Published in:

International Journal of Intelligent Computing & Information Sciences, 2025, v. 25, n. 1, p. 1, doi. 10.21608/ijicis.2025.358362.1375

By:

Elsawwaf, Ali M.;
Faheem, Hossam M.;
Aly, Gamal M.;
Fayez, Mahmoud

Publication type:

Article

Decoding ferroptosis in ischemic stroke: key genes and the therapeutic potential of acupuncture.

Published in:

Frontiers in Aging Neuroscience, 2025, p. 1, doi. 10.3389/fnagi.2025.1506276

By:

Wu, Chunxiao;
Xu, Zhirui;
Wang, Qizhang;
Zhu, Shuping;
Tang, Chunzhi

Publication type:

Article

Prognostic impact of caspase‐8 mutation in oral cavity squamous cell carcinoma.

Published in:

Oral Diseases, 2025, v. 31, n. 3, p. 769, doi. 10.1111/odi.15124

By:

Lu, Hsueh‐Ju;
Su, Chun‐Wen;
Su, Shih‐Chi;
Chang, Lun‐Ching;
Wu, Ming‐Fang;
Lin, Chiao‐Wen;
Yang, Shun‐Fa

Publication type:

Article

Identification of endogenous agonists of extra‐oral bitter taste receptors.

Published in:

Lebensmittelchemie, 2025, v. 79, p. S2-114, doi. 10.1002/lemi.202552251

By:

Ziegler, Florian;
Behrens, Maik;
Schwab, Wilfried

Publication type:

Article

Graph-Based Approaches in Bioinformatics.

Published in:

Ecology, Environment & Conservation (0971765X), 2025, v. 31, p. S349, doi. 10.53550/EEC.2025.v31i03s.057

By:

Jayakar, Meghna B.;
Subhash, Shruthi

Publication type:

Article

A Study on Identification of Chromium (Cr) Metal Binding Sites in Earthworm Eisenia fetida using Bioinformatics Tool.

Published in:

Ecology, Environment & Conservation (0971765X), 2025, v. 31, p. S50, doi. 10.53550/EEC.2025.v31i03s.010

By:

Devapriya, O. Evangeline;
Akilan, M.;
Dhamodharan, B.

Publication type:

Article

A Modified Ligature‐Induced Peri‐Implantitis Murine Model and RNA Sequencing Analysis Compared With Human Subjects.

Published in:

Journal of Clinical Periodontology, 2025, v. 52, n. 5, p. 787, doi. 10.1111/jcpe.14127

By:

Tong, Zi‐an;
Chen, Long;
Shen, Ling;
Lu, Yi‐fan;
Zhang, Jian‐wei;
Qi, Ya‐dong;
Qian, Yin‐jie;
Bao, Si‐qi;
Chen, Wei;
Si, Mi‐si

Publication type:

Article

Exploring Therapeutic Targets and Drugs for Recurrent Spontaneous Abortion by M1 Macrophage Exosome Sequencing Analysis: A Bioinformatic and Vitro Study.

Published in:

American Journal of Reproductive Immunology, 2025, v. 93, n. 6, p. 1, doi. 10.1111/aji.70115

By:

Tang, Cen;
Hu, Wanqin;
Liu, Yunhua

Publication type:

Article

Special Issue on Preeclampsia and Beyond.

Published in:

American Journal of Reproductive Immunology, 2025, v. 93, n. 6, p. 1, doi. 10.1111/aji.70103

By:

Sharma, Surendra;
Gomez‐Lopez, Nardhy;
Saade, George

Publication type:

Article

The immune landscape of human tumors.

Published in:

OncoImmunology, 2014, v. 3, n. 2, p. N.PAG, doi. 10.4161/onci.27456

By:

Bindea, Gabriela;
Mlecnik, Bernhard;
Angell, Helen K;
Galon, Jérôme

Publication type:

Article

Clustering of self-organizing map identifies five distinct medulloblastoma subgroups.

Published in:

Cancer Biomarkers, 2016, v. 16, n. 3, p. 327, doi. 10.3233/CBM-160570

By:

Changjun Cao;
Wei Wang;
Pucha Jiang

Publication type:

Article

Down-regulation of LXR/RXR activation and negative acute phase response pathways in colon adenocarcinoma revealed by proteomics and bioinformatics analysis.

Published in:

Cancer Biomarkers, 2014, v. 14, n. 5, p. 313, doi. 10.3233/CBM-140409

By:

Tang, Hui;
Mirshahidi, Saied;
Senthil, Maheswari;
Kazanjian, Kevork;
Chen, Chien-Shing;
Zhang, Kangling

Publication type:

Article

Systems biology of cancer biomarker detection.

Published in:

Cancer Biomarkers, 2013, v. 13, n. 4, p. 201, doi. 10.3233/CBM-130363

By:

Mitra, Sanga;
Das, Smarajit;
Chakrabarti, Jayprokas

Publication type:

Article

Bioinformatics: Biomarkers of early detection.

Published in:

Cancer Biomarkers, 2011, v. 9, n. 1-6, p. 511

By:

Srivastava, Sudhir;
Grizzle, William E.;
Crichton, Daniel J.;
Mattmann, Chris A.;
Thornquist, Mark;
Anton, Kristen;
Hughes, J. Steven

Publication type:

Article

Molecular profiling of triple negative breast cancer.

Published in:

Breast Disease, 2011, v. 32, n. 1/2, p. 73, doi. 10.3233/BD-2010-0314

By:

Eng-Wong, Jennifer;
Zujewski, Jo Anne;
Ma, Cynthia X.;
Luo, Jingqin;
Ellis, Matthew J.

Publication type:

Article

Sphingolipid metabolism-related genes for the diagnosis of metabolic syndrome by integrated bioinformatics analysis and Mendelian randomization identification.

Published in:

Diabetology & Metabolic Syndrome, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13098-025-01803-8

By:

Li, Weidong;
Zhong, Qixing;
Deng, Naisheng;
Zhou, Xinhao;
Wang, Haitao;
Ouyang, Jun;
Guan, Zhifen;
Cheng, Bohao;
Xiang, Lijun;
Huang, Yueming;
Wang, Yao

Publication type:

Article

Tobacco carcinogen NNK promotes pancreatic cancer proliferation via LINC00857/β-catenin.

Published in:

Tobacco Induced Diseases, 2025, v. 23, p. 1, doi. 10.18332/tid/203455

By:

Zhou, Cancan;
Cao, Ruiqi;
Wang, Qiqi;
Mo, Jiantao;
Qian, Weikun;
Feng, Zhengyuan;
Zhang, Shengzhan;
Chen, Xin;
Hao, Jie;
Ma, Qingyong;
Wu, Zheng;
Wang, Zheng

Publication type:

Article

Bioinformatics-based identification of key genes for Olaparib resistance in breast cancer: prognostic implications and therapeutic relevance.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02989-z

By:

Shen, Kezhen;
Li, Xiaozhe;
Zhao, Sihan;
Zhang, Xinyu;
Yu, Le;
Li, Jun;
Cai, Lei

Publication type:

Article

Identification of Quercetin as a Natural MMP1 Inhibitor for Overcoming Cisplatin Resistance in Epithelial Ovarian Cancer.

Published in:

Journal of Cancer, 2025, v. 16, n. 8, p. 2578, doi. 10.7150/jca.110517

By:

Shubo Wang;
Ziming Zhao;
Lili Yu;
Jue Wang;
Yue Ouyang;
Hua Zhou;
Weixing Shen;
Qibiao Wu

Publication type:

Article

Integrating multi-omics to unveil PSMD12 as a critical gene in promoting brain metastases of lung adenocarcinoma.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06680-3

By:

Li, Xin;
Zhang, Juxuan;
Zhang, Meng;
Jiang, Wenbin;
Jia, Dexin;
Wang, Ruxiong;
Li, Hao;
Wang, Zhihui;
Liu, Yixin;
Tang, Lefan;
Deng, Jiaxing;
Zhao, Wenyuan;
Yu, Yan;
Liu, Shilong;
Qi, Lishuang

Publication type:

Article

Deciphering the relationship between sarcopenia and aging: A combined text mining and bioinformatics approach.

Published in:

Geriatrics & Gerontology International, 2025, v. 25, n. 6, p. 806, doi. 10.1111/ggi.70042

By:

Kamihara, Takahiro;
Omura, Takuya;
Shimizu, Atsuya

Publication type:

Article

Correction: Sepsis-related immune signature C3 in endometrial carcinoma: implications for prognosis, tumor progression through bioinformatics and experimental validation.

Published in:

2025

By:

Kulsoom;
Ali, Wajahat;
Ahmad, Saleem;
Khan, Irfan Ali;
Soni, Tanveen Kaur;
Masood, Asia;
Iqbal, Muhammad Omer;
uglu, Valisher Sapayev Odilbek;
Djumaniyazova, Mukhayya Xusinovna;
Cholavaram, Anas Sameed;
Abdulrahmon, Mubaraq Arisekola

Publication type:

Correction Notice

Reactive Oxygen Species (ROS) and Their Profound Influence on Regulating Diverse Aspects of Cancer: A Concise Review.

Published in:

Drug Development Research, 2025, v. 86, n. 4, p. 1, doi. 10.1002/ddr.70107

By:

Tiwari, Rachana;
Mondal, Ysani;
Bharadwaj, Khyathi;
Mahajan, Mohita;
Mondal, Sukanta;
Sarkar, Angshuman

Publication type:

Article

Shared Genetic Characteristics of Coronary Artery Disease and Peripheral artery Disease: Insights From Integrated Bioinformatics Analysis of RNA-Sequencing Data.

Published in:

Bioinformatics & Biology Insights, 2025, p. 1, doi. 10.1177/11779322251344123

By:

Nawabi, Abdul Qadir;
Chen, Lijuan

Publication type:

Article

Evaluating Semi-Markov Processes and Other Epidemiological Time-to-Event Models by Computing Disease Sojourn Density as Partial Differential Equations.

Published in:

Medical Decision Making, 2025, v. 45, n. 5, p. 569, doi. 10.1177/0272989X251333398

By:

Worthington, Joachim;
Feletto, Eleonora;
He, Emily;
Wade, Stephen;
de Graaff, Barbara;
Nguyen, Anh Le Tuan;
George, Jacob;
Canfell, Karen;
Caruana, Michael

Publication type:

Article

Therapeutic potential of miR-204-5p in intervertebral disc degeneration: targeting the SSRP1/NF-κB pathway to inhibit apoptosis.

Published in:

Journal of Orthopaedic Surgery & Research, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13018-025-05999-3

By:

Zhao, Chenhao;
Li, Qiuwei;
Shen, Cailiang

Publication type:

Article

Biological Network Analysis of Genes and Non-coding RNAs in Polycystic Ovary Syndrome.

Published in:

Cyprus Journal of Medical Sciences, 2025, v. 10, p. 1, doi. 10.4274/cjms.2025.2024-131

By:

Hasanzadeh, Bita Ostad;
Hasanzadeh, Parham Ostad;
Tulay, Pınar

Publication type:

Article

Single cell analysis and bioinformatics reveal pyroptosis mechanisms in hepatocellular carcinoma.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02907-3

By:

Luo, Wei;
JunxiaWang;
Wang, Hongfei;
Liu, Fei;
Yang, Taiwei;
Wu, Zhongjun;
Guo, Wubin

Publication type:

Article

LMNB1 regulates breast cancer cell senescence and migration through PPAR signaling pathway.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02709-7

By:

Meng, Shaoda;
Liu, Sicheng;
Liu, Chunsheng;
Yang, Kunxian;
Lai, Minghua

Publication type:

Article

Identification of biomarkers associated with exhausted CD8 + T cells in the tumor microenvironment of intrahepatic cholangiocarcinoma based on Mendelian randomization and bioinformatics analysis.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02970-w

By:

Feng, LiuXing;
Yuan, Quan;
Yu, Hao;
Ye, RongJie;
Xie, ZhenHao;
Xu, JiaHuan;
Li, XiuDong;
Wang, ShuangJia

Publication type:

Article

Current situation and challenges of tumor biotherapy based on alternative splicing.

Published in:

Chinese Journal of Cancer Biotherapy, 2025, v. 32, n. 4, p. 347, doi. 10.3872/j.issn.1007-385x.2025.04.001

By:

CUI Mengmeng;
LIU Shuxun;
YU Yizhi

Publication type:

Article

A Review of In Silico Approaches for Discovering Natural Viral Protein Inhibitors in Aquaculture Disease Control.

Published in:

Journal of Fish Diseases, 2025, v. 48, n. 7, p. 1, doi. 10.1111/jfd.14120

By:

Khang, Luu Tang Phuc;
Dinh‐Hung, Nguyen;
Islam, Sk Injamamul;
Dwinanti, Sefti Heza;
Mwamburi, Samuel Mwakisha;
Permpoonpattana, Patima;
Linh, Nguyen Vu

Publication type:

Article

The role and mechanism of CRISPLD2 in skin fibrosis of systemic sclerosis.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3134, doi. 10.1093/rheumatology/keae541

By:

Ding, Liqing;
Bao, Ding;
Dai, Bingying;
Meng, Qiming;
Lv, Chunliu;
Luo, Hui;
Zhu, Honglin

Publication type:

Article

ADAM32 Oncogene in Hepatoblastoma Is Regulated by IGF2BP2.

Published in:

Cancers, 2025, v. 17, n. 11, p. 1772, doi. 10.3390/cancers17111772

By:

Fukazawa, Takahiro;
Tanimoto, Keiji;
Kojima, Masato;
Kanawa, Masami;
Hirohashi, Nobuyuki;
Hiyama, Eiso

Publication type:

Article

In Search of Healthy Ageing: A Microbiome-Based Precision Nutrition Approach for Type 2 Diabetes Prevention.

Published in:

Nutrients, 2025, v. 17, n. 11, p. 1877, doi. 10.3390/nu17111877

By:

González, Adriana;
Fullaondo, Asier;
Odriozola, Adrian

Publication type:

Article

The Gut Microbiota in Young Adults with High-Functioning Autism Spectrum Disorder and Its Performance as Diagnostic Biomarkers.

Published in:

Nutrients, 2025, v. 17, n. 11, p. 1748, doi. 10.3390/nu17111748

By:

Ying, Jiangbo;
Xu, Xinran;
Zhou, Ruwen;
Chung, Arthur C. K.;
Ng, Siu Kin;
Fan, Xiuyi;
Subramaniam, Mythily;
Wong, Sunny H.

Publication type:

Article

Multi-omics analysis of tumor necrosis factor superfamily 4 reveals its prognostic value with T cell exhaustion feature in cancer.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02666-1

By:

Lei, Kai;
Chen, Weiqing;
Wang, Anqi;
Zeng, Anyu;
Ding, Yun;
Luo, Tianqi;
Zhou, Qi

Publication type:

Article

TCF19 expression and significance analysis in breast cancer: integrated bioinformatics analysis and histological validation.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02546-8

By:

Yu, Haiyang;
Wei, Jingjing;
Chen, Qinhao;
Pan, Yueyin;
Qian, Xiaojun;
Pan, Jing;
Sun, Yubei

Publication type:

Article

Reanalysis of Exome Sequencing Data in the Indian Undiagnosed Diseases Program: Improving Diagnostic Yield and Ending Diagnostic Odyssey.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 620, doi. 10.1111/cge.14694

By:

Garg, Neha;
Lakshmi, Pragna;
Singh, Suzena M.;
Kulshreshta, Samarth;
Ranganath, Prajnya;
Moirangthem, Amita;
Dalal, Ashwin;
Gahlot, Aakanksha;
Puri, Ratna Dua

Publication type:

Article

Improved Diagnostic Yield in Recessive Intellectual Disability Utilizing Systematic Whole Exome Sequencing Data Reanalysis.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 612, doi. 10.1111/cge.14692

By:

Fattahi, Zohreh;
Shokouhian, Ebrahim;
Peymani, Fatemeh;
Babanejad, Mojgan;
Beheshtian, Maryam;
Edizadeh, Masoud;
Molaei, Negar;
Alagha, Parnian;
Ghodratpour, Fatemeh;
Keshavarzi, Fatemeh;
Moghadam, Masoumeh Goleyjani;
Arzhangi, Sanaz;
Kahrizi, Kimia;
Najmabadi, Hossein

Publication type:

Article

Restoration of gut microbiota with a specific synbiotic-containing infant formula in healthy Chinese infants born by cesarean section.

Published in:

European Journal of Clinical Nutrition, 2025, v. 79, n. 6, p. 567, doi. 10.1038/s41430-025-01571-8

By:

Wang, Ying;
Wopereis, Harm;
Kakourou, Alexia;
Liu, Min;
Wu, Jieling;
Li, Zailing;
Zhang, Lili;
Tan, Meizhen;
Low, June Su Yin;
Liu, Mengjin;
Roeselers, Guus;
Knol, Jan;
Cai, Wei

Publication type:

Article

Electroacupuncture attenuates bone erosion and promotes macrophage polarization in a mouse model of collagen-induced arthritis.

Published in:

Acupuncture in Medicine, 2025, v. 43, n. 3, p. 150, doi. 10.1177/09645284251331991

By:

Dong, Shi-Ying;
Zhou, Ying;
Wang, Xiao-Chi;
Du, Zhong-Heng;
Ye, Tian-Shen

Publication type:

Article

SinoMedminer: an R package and shiny application for mining and visualizing traditional Chinese medicine herbal formulas.

Published in:

Chinese Medicine, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13020-025-01127-9

By:

Dan, Wenchao;
Guo, Xinyuan;
Zhang, Guangzhong;
Zhang, Hui;
Liu, Jin;
Li, Qiushuang;
Chen, Yang;
He, Qingyong

Publication type:

Article