Works about AMINO acid residues

Results: 3450

Molecular characterization of a Minus-C odorant-binding protein from Cyrtotrachelus buqueti (Coleoptera: Curculionidae).

Published in:

Frontiers in Physiology, 2025, p. 1, doi. 10.3389/fphys.2025.1586738

By:

Liu, Long;
Li, Yangdi;
Yang, Hua;
Wang, Fan;
Huang, Qiong

Publication type:

Article

Anti-Inflammatory Activity of Some Characteristic Constituents of Spatholobus littoralis Root Wood Extract: In Vitro and In Silico Studies.

Published in:

Tropical Journal of Natural Product Research, 2025, v. 9, n. 4, p. 1818, doi. 10.26538/tjnpr/v9i4.55

By:

Atun, Sri;
Aznam, Nurfina;
Suwardi, Suwardi;
Nurjanah, Siti;
Az-Zahra, Rhizma;
Garinda, Aura C. B.;
Damara, Rizki;
Octaviani, Evelyn;
Sangal, Aditi

Publication type:

Article

Influence of in situ Limited Proteolysis of Potato Virus X on Change in the Structure of Virions According to the Small-Angle X-Ray Scattering Data and Tritium Labeling.

Published in:

Biochemistry (00062979), 2025, v. 90, n. 3, p. 413, doi. 10.1134/S0006297925600279

By:

Ksenofontov, Alexander L.;
Petoukhov, Maxim. V.;
Peters, Georgy S.;
Arutyunyan, Alexander M.;
Baratova, Lyudmila A.;
Arkhipenko, Marina V.;
Nikitin, Nikolai A.;
Karpova, Olga V.;
Shtykova, Eleonora V.

Publication type:

Article

Rapid screening of α-amylase inhibitors from Aloe vera based on polydopamine/L-cysteine bifunctionalized magnetic mesoporous silica immobilized α-amylase.

Published in:

Analytical & Bioanalytical Chemistry, 2025, v. 417, n. 13, p. 2971, doi. 10.1007/s00216-025-05841-z

By:

Wang, Lei;
Li, Yue;
Wang, Sikai;
Lv, Lin;
Liu, Hongmei;
Zhang, Guoqi;
Zhao, Yan

Publication type:

Article

A novel bioflocculant competent of coagulating and flocculating the polystyrene from an Alcaligenes sp.

Published in:

Journal of Nanoparticle Research, 2025, v. 27, n. 4, p. 1, doi. 10.1007/s11051-025-06299-x

By:

Shehbas, M. Chekkath;
Nampoothiri, K. Madhavan

Publication type:

Article

Virtual screening and molecular dynamics simulation study of ATP-competitive inhibitors targeting mTOR protein.

Published in:

PLoS ONE, 2025, v. 20, n. 5, p. 1, doi. 10.1371/journal.pone.0319608

By:

Jin, Mei-Yu;
Yu, Hao;
Deng, Qiong;
Wang, Zhu;
Wang, Jie-Yan;
Li, Hao-Long;
Liang, Hui

Publication type:

Article

The Significance of the M6 and M8 Membrane Segments in the Biogenesis and Functioning of the Yeast PMA1 H+-ATPase.

Published in:

Microbiology (00262617), 2025, v. 94, n. 2, p. 227, doi. 10.1134/S0026261724608984

By:

Petrov, V. V.

Publication type:

Article

Complete genome and molecular characterization of spiranthes mosaic virus 3 from Phlox paniculata.

Published in:

Virus Genes, 2025, v. 61, n. 3, p. 381, doi. 10.1007/s11262-025-02147-1

By:

Motsar, Elena;
Sharko, Fedor;
Sheveleva, Anna;
Savostyanova, Larisa;
Mitrofanova, Irina;
Chirkov, Sergei

Publication type:

Article

Molecular epidemiology and phylogenetic analysis of human respiratory syncytial virus type B in Riyadh, Saudi Arabia.

Published in:

Virus Genes, 2025, v. 61, n. 3, p. 284, doi. 10.1007/s11262-025-02143-5

By:

Aljowaie, Reem M.;
Farrag, Mohamed A.;
Abalkhail, Tarad;
Aziz, Ibrahim M.;
Almuqrin, Abdulaziz M.;
Alkubaisi, Noorah A.;
Alsaleh, Asma N.;
Almajhdi, Fahad N.

Publication type:

Article

Update on the target structures of SARS-CoV-2: A systematic review.

Published in:

Indian Journal of Pharmacology, 2020, v. 52, n. 2, p. 142, doi. 10.4103/ijp.IJP_338_20

By:

Prajapat, Manisha;
Sarma, Phulen;
Shekhar, Nishant;
Prakash, Ajay;
Avti, Pramod;
Bhattacharyya, Anusuya;
Kaur, Hardeep;
Kumar, Subodh;
Bansal, Seema;
Sharma, Amit Raj;
Medhi, Bikash

Publication type:

Article

RPfam: A refiner towards curated-like multiple sequence alignments of the Pfam protein families.

Published in:

Journal of Bioinformatics & Computational Biology, 2022, v. 20, n. 4, p. 1, doi. 10.1142/S0219720022400029

By:

Wei, Qingting;
Zou, Hong;
Zhong, Cuncong;
Xu, Jianfeng

Publication type:

Article

Analysis to determine the effect of mutations on binding to small chemical molecules.

Published in:

Journal of Bioinformatics & Computational Biology, 2022, v. 20, n. 2, p. 1, doi. 10.1142/S0219720022400030

By:

Koshlan, T. V.;
Kulikov, K. G.

Publication type:

Article

Clarifying real receptor binding site between coronavirus HCoV-HKU1 and 9-O-Ac-Sia based on molecular docking.

Published in:

Journal of Bioinformatics & Computational Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1142/S0219720021500347

By:

Liu, Xiaoyu;
Zhao, Jingying;
Li, Sicong;
Wei, Cai;
Wang, Shihang;
Xu, Xuanyu;
Zheng, Yin;
Deng, Xiangyu;
Yuan, Wenliang;
Zeng, Xiaomin;
Peng, Sihua

Publication type:

Article

An innovative method for the selection of inhibitors of the viral spike-glycoprotein of the SARS-CoV.

Published in:

Journal of Bioinformatics & Computational Biology, 2021, v. 19, n. 1, p. N.PAG, doi. 10.1142/S0219720020500432

By:

Koshlan, T. V.;
Kulikov, K. G.

Publication type:

Article

Protein tertiary structure prediction using hidden Markov model based on lattice.

Published in:

Journal of Bioinformatics & Computational Biology, 2019, v. 17, n. 2, p. N.PAG, doi. 10.1142/S0219720019500070

By:

Peyravi, Farzad;
Latif, Alimohammad;
Moshtaghioun, Seyed Mohammad

Publication type:

Article

Protein secondary structure prediction improved by recurrent neural networks integrated with two-dimensional convolutional neural networks.

Published in:

Journal of Bioinformatics & Computational Biology, 2018, v. 16, n. 5, p. N.PAG, doi. 10.1142/S021972001850021X

By:

Guo, Yanbu;
Wang, Bingyi;
Li, Weihua;
Yang, Bei

Publication type:

Article

Extending hidden Markov models to allow conditioning on previous observations.

Published in:

Journal of Bioinformatics & Computational Biology, 2018, v. 16, n. 5, p. N.PAG, doi. 10.1142/S0219720018500191

By:

Tamposis, Ioannis A.;
Theodoropoulou, Margarita C.;
Tsirigos, Konstantinos D.;
Bagos, Pantelis G.

Publication type:

Article

NEAT-FLEX: Predicting the conformational flexibility of amino acids using neuroevolution of augmenting topologies.

Published in:

Journal of Bioinformatics & Computational Biology, 2017, v. 15, n. 3, p. -1, doi. 10.1142/S0219720017500093

By:

Grisci, Bruno;
Dorn, Márcio

Publication type:

Article

A machine-learning approach for predicting palmitoylation sites from integrated sequence-based features.

Published in:

Journal of Bioinformatics & Computational Biology, 2017, v. 15, n. 1, p. -1, doi. 10.1142/S0219720016500256

By:

Li, Liqi;
Luo, Qifa;
Xiao, Weidong;
Li, Jinhui;
Zhou, Shiwen;
Li, Yongsheng;
Zheng, Xiaoqi;
Yang, Hua

Publication type:

Article

Search for conserved amino acid residues of the -crystallin proteins of vertebrates.

Published in:

Journal of Bioinformatics & Computational Biology, 2016, v. 14, n. 2, p. -1, doi. 10.1142/S0219720016410043

By:

Shiliaev, Nikita G.;
Selivanova, Olga M.;
Galzitskaya, Oxana V.

Publication type:

Article

Conserved features of complexes of TATA-box binding proteins with DNA.

Published in:

Journal of Bioinformatics & Computational Biology, 2016, v. 14, n. 2, p. -1, doi. 10.1142/S0219720016410079

By:

Zanegina, Olga;
Aksianov, Evgeniy;
Alexeevski, Andrei V.;
Karyagina, Anna;
Spirin, Sergei

Publication type:

Article

Calibrating the classifier for protein family prediction with protein sequence using machine learning techniques: An empirical investigation.

Published in:

International Journal of Wavelets, Multiresolution & Information Processing, 2023, v. 21, n. 3, p. 1, doi. 10.1142/S021969132250045X

By:

Idhaya, T.;
Suruliandi, A.;
Calitoiu, Dragos;
Raja, S. P.

Publication type:

Article

Characterization of the Secondary Structure of CP30, a Highly Repetitive Ampholytic Protein in Beetle Elytral Cuticle.

Published in:

Macromolecular Symposia, 2015, v. 358, n. 1, p. 212, doi. 10.1002/masy.201500074

By:

Sprouse, Patricia A.;
Dittmer, Neal T.;
Kramer, Karl J.;
Kanost, Michael R.;
Dhar, Prajnaparamita;
Gehrke, Stevin H.

Publication type:

Article

Mass Spectrometry‐Based Platforms for Protein Lipoxidation Profiling.

Published in:

2024

By:

Tang, Ziming;
Wang, Tianyang;
Liu, Chunrong

Publication type:

Literature Review

Biosynthesis of Nonribosomal Peptides Chitinimides Reveal a Special Type of Thioesterase Domains.

Published in:

Chemistry - A European Journal, 2024, v. 30, n. 69, p. 1, doi. 10.1002/chem.202402763

By:

Niu, Weijing;
Liu, Jiaqi;
Duan, Yuwei;
Zhong, Lin;
Pang, Linlin;
Zhong, Guannan;
Zhang, Youming;
Bian, Xiaoying

Publication type:

Article

Development of Low‐Toxicity Antimicrobial Polycarbonates Bearing Lysine Residues.

Published in:

Chemistry - A European Journal, 2024, v. 30, n. 61, p. 1, doi. 10.1002/chem.202402302

By:

Gao, Ruixuan;
Xue, Menglin;
Shen, Ning;
Zhao, Xue;
Zhang, Justin C.;
Cao, Chuanhai;
Cai, Jianfeng

Publication type:

Article

Non‐Medical Applications of Inorganic Medicines. A Switch Based on Mechanistic Knowledge.

Published in:

Chemistry - A European Journal, 2024, v. 30, n. 60, p. 1, doi. 10.1002/chem.202402647

By:

Cirri, Damiano;
Di Leo, Riccardo;
Chiaverini, Lorenzo;
Tolbatov, Iogann;
Marrone, Alessandro;
Messori, Luigi;
Pratesi, Alessandro;
La Mendola, Diego;
Marzo, Tiziano

Publication type:

Article

Exploiting Hydrophobic Amino Acid Scanning to Develop Cyclic Peptide Inhibitors of the SARS‐CoV‐2 Main Protease with Antiviral Activity.

Published in:

Chemistry - A European Journal, 2024, v. 30, n. 44, p. 1, doi. 10.1002/chem.202401606

By:

Harrison, Katriona;
Carlos, Patrick W.;
Ullrich, Sven;
Aggarwal, Anupriya;
Johansen‐Leete, Jason;
Sasi, Vishnu Mini;
Barter, Isabel;
Maxwell, Joshua W. C.;
Bedding, Max J.;
Larance, Mark;
Turville, Stuart;
Norman, Alexander;
Jackson, Colin J.;
Nitsche, Christoph;
Payne, Richard J.

Publication type:

Article

Binding of Acetylated Lysine by Using a Water Soluble Aryl Extended Calix[4]pyrrole.

Published in:

Chemistry - A European Journal, 2024, v. 30, n. 18, p. 1, doi. 10.1002/chem.202303715

By:

Orlandini, Martina;
Pedrini, Alessandro;
Marchetti, Danilo;
Li, Yifan;
Aragay, Gemma;
Dalcanale, Enrico;
Ballester, Pablo;
Pinalli, Roberta

Publication type:

Article

Site‐Selective Protein Conjugation by a Multicomponent Ugi Reaction.

Published in:

Chemistry - A European Journal, 2024, v. 30, n. 14, p. 1, doi. 10.1002/chem.202303242

By:

Koutsopetras, Ilias;
Vaur, Valentine;
Benazza, Rania;
Diemer, Hélène;
Sornay, Charlotte;
Ersoy, Yağmur;
Rochet, Léa;
Longo, Carmen;
Hernandez‐Alba, Oscar;
Erb, Stéphane;
Detappe, Alexandre;
Skerra, Arne;
Wagner, Alain;
Cianferani, Sarah;
Chaubet, Guilhem

Publication type:

Article

Next Generation of Fluorometric Protease Assays: 7‐Nitrobenz‐2‐oxa‐1,3‐diazol‐4‐yl‐amides (NBD‐Amides) as Class‐Spanning Protease Substrates.

Published in:

Chemistry - A European Journal, 2023, v. 29, n. 50, p. 1, doi. 10.1002/chem.202301855

By:

Maus, Hannah;
Müller, Patrick;
Meta, Mergim;
Hoba, Sabrina N.;
Hammerschmidt, Stefan J.;
Zimmermann, Robert A.;
Zimmer, Collin;
Fuchs, Natalie;
Schirmeister, Tanja;
Barthels, Fabian

Publication type:

Article

Probing Peptidylprolyl Bond cis/trans Status Using Distal 19F NMR Reporters.

Published in:

Chemistry - A European Journal, 2023, v. 29, n. 16, p. 1, doi. 10.1002/chem.202203017

By:

Killoran, Patrick M.;
Hanson, George S. M.;
Verhoork, Sanne J. M.;
Smith, Madeleine;
Del Gobbo, Davide;
Lu-Yun Lian;
Coxon, Christopher R.

Publication type:

Article

Infrared Spectroscopy Elucidates the Inhibitor Binding Sites in a Metal‐Dependent Formate Dehydrogenase.

Published in:

Chemistry - A European Journal, 2022, v. 28, n. 54, p. 1, doi. 10.1002/chem.202201091

By:

Laun, Konstantin;
Duffus, Benjamin R.;
Wahlefeld, Stefan;
Katz, Sagie;
Belger, Dennis;
Hildebrandt, Peter;
Mroginski, Maria Andrea;
Leimkühler, Silke;
Zebger, Ingo

Publication type:

Article

Irreversible Inhibition of IspG, a Target for the Development of New Antimicrobials, by a 2‐Vinyl Analogue of its MEcPP Substrate.

Published in:

Chemistry - A European Journal, 2022, v. 28, n. 30, p. 1, doi. 10.1002/chem.202200241

By:

Herrscher, Vivien;
Witjaksono, Clea;
Buchotte, Marie;
Ferret, Claire;
Massicot, Fabien;
Vasse, Jean‐Luc;
Borel, Franck;
Behr, Jean‐Bernard;
Seemann, Myriam

Publication type:

Article

Xanthomonine I-III: eine neue Klasse von Lassopeptiden mit einem Makrolactamring aus sieben Aminosäureresten.

Published in:

Angewandte Chemie, 2014, v. 126, n. 8, p. 2262, doi. 10.1002/ange.201309267

By:

Hegemann, Julian D.;
Zimmermann, Marcel;
Zhu, Shaozhou;
Steuber, Holger;
Harms, Klaus;
Xie, Xiulan;
Marahiel, Mohamed A.

Publication type:

Article

Formation of Functionalized Nanowires by Control of Self-Assembly Using Multiple Modified Amyloid Peptides.

Published in:

Advanced Functional Materials, 2014, v. 23, n. 39, p. 4881, doi. 10.1002/adfm.201300577

By:

Sakai, Hiroki;
Watanabe, Ken;
Asanomi, Yuya;
Kobayashi, Yumiko;
Chuman, Yoshiro;
Shi, Lihong;
Masuda, Takuya;
Wyttenbach, Thomas;
Bowers, Michael T.;
Uosaki, Kohei;
Sakaguchi, Kazuyasu

Publication type:

Article

Insights from Ca2+→Sr2+ substitution on the mechanism of O-O bond formation in photosystem II.

Published in:

Photosynthesis Research, 2024, v. 162, n. 2, p. 331, doi. 10.1007/s11120-024-01117-2

By:

Bury, Gabriel;
Pushkar, Yulia

Publication type:

Article

Towards engineering a hybrid carboxysome.

Published in:

Photosynthesis Research, 2023, v. 156, n. 2, p. 265, doi. 10.1007/s11120-023-01009-x

By:

Nguyen, Nghiem Dinh;
Pulsford, Sacha B.;
Hee, Wei Yi;
Rae, Benjamin D.;
Rourke, Loraine M.;
Price, G. Dean;
Long, Benedict M.

Publication type:

Article

Identification of amino acid residues in a proton release pathway near the bacteriochlorophyll dimer in reaction centers from Rhodobacter sphaeroides.

Published in:

Photosynthesis Research, 2023, v. 155, n. 1, p. 23, doi. 10.1007/s11120-022-00968-x

By:

Allen, J. P.;
Chamberlain, K. D.;
Williams, J. C.

Publication type:

Article

Oxidative modification of LHC II associated with photosystem II and PS I-LHC I-LHC II membranes.

Published in:

Photosynthesis Research, 2022, v. 152, n. 3, p. 261, doi. 10.1007/s11120-022-00902-1

By:

Kale, Ravindra S.;
Seep, Jacob L.;
Sallans, Larry;
Frankel, Laurie K.;
Bricker, Terry M.

Publication type:

Article

Natively oxidized amino acid residues in the spinach PS I-LHC I supercomplex.

Published in:

Photosynthesis Research, 2020, v. 143, n. 3, p. 263, doi. 10.1007/s11120-019-00698-7

By:

Kale, Ravindra;
Sallans, Larry;
Frankel, Laurie K.;
Bricker, Terry M.

Publication type:

Article

Bound manganese oxides capable of reducing the bacteriochlorophyll dimer of modified reaction centers from Rhodobacter sphaeroides.

Published in:

Photosynthesis Research, 2020, v. 143, n. 2, p. 129, doi. 10.1007/s11120-019-00680-3

By:

Espiritu, Eduardo;
Chamberlain, Kori D.;
Williams, JoAnn C.;
Allen, James P.

Publication type:

Article

Natively oxidized amino acid residues in the spinach cytochrome b6f complex.

Published in:

Photosynthesis Research, 2018, v. 137, n. 1, p. 141, doi. 10.1007/s11120-018-0485-0

By:

Taylor, Ryan M.;
Sallans, Larry;
Frankel, Laurie K.;
Bricker, Terry M.

Publication type:

Article

Site-directed mutagenesis of amino acid residues of D1 protein interacting with phosphatidylglycerol affects the function of plastoquinone Q in photosystem II.

Published in:

Photosynthesis Research, 2015, v. 126, n. 2/3, p. 385, doi. 10.1007/s11120-015-0150-9

By:

Endo, Kaichiro;
Mizusawa, Naoki;
Shen, Jian-Ren;
Yamada, Masato;
Tomo, Tatsuya;
Komatsu, Hirohisa;
Kobayashi, Masami;
Kobayashi, Koichi;
Wada, Hajime

Publication type:

Article

Recombinantly expressed MeICT, a new toxin from Mesobuthus eupeus scorpion, inhibits glioma cell proliferation and downregulates Annexin A2 and FOXM1 genes.

Published in:

Biotechnology Letters, 2022, v. 44, n. 5/6, p. 703, doi. 10.1007/s10529-022-03254-x

By:

Gandomkari, Maryam Shahbazi;
Ayat, Hoda;
Ahadi, Ali Mohammad

Publication type:

Article

A single point mutation converts a glutaryl-7-aminocephalosporanic acid acylase into an N-acyl-homoserine lactone acylase.

Published in:

Biotechnology Letters, 2021, v. 43, n. 7, p. 1467, doi. 10.1007/s10529-021-03135-9

By:

Murugayah, Shereen A.;
Evans, Gary B.;
Tyndall, Joel D. A.;
Gerth, Monica L.

Publication type:

Article

Soluble overexpression of a flagellin derivative from Salmonella enterica using synonymous codon substitutions of 5′-coding region in Escherichia coli.

Published in:

Biotechnology Letters, 2019, v. 41, n. 11, p. 1275, doi. 10.1007/s10529-019-02733-y

By:

Cheong, Dae-Eun;
Lee, Jihye;
Choi, Hye-Ji;
Yoo, Su-Kyoung;
Lee, Dong-Hyun;
Kim, Geun-Joong

Publication type:

Article

Characterization of a novel multi-domain xylanase from Clostridium clariflavum with application in hydrolysis of corn cobs.

Published in:

Biotechnology Letters, 2019, v. 41, n. 10, p. 1177, doi. 10.1007/s10529-019-02721-2

By:

Liu, Yulu;
Sun, Yawu;
Wang, Huaguang;
Tang, Lei

Publication type:

Article

Isolation and characterization of a novel l-glutamate oxidase with strict substrate specificity from Streptomyces diastatochromogenes.

Published in:

Biotechnology Letters, 2017, v. 39, n. 4, p. 523, doi. 10.1007/s10529-016-2269-y

By:

Wang, Lijuan;
Peng, Rihe;
Tian, Yongsheng;
Liu, Man;
Yao, Quanhong

Publication type:

Article

Residue Val237 is critical for the enantioselectivity of Penicillium expansum lipase.

Published in:

Biotechnology Letters, 2014, v. 36, n. 3, p. 633, doi. 10.1007/s10529-013-1405-1

By:

Tang, Lianghua;
Su, Min;
Chi, Liying;
Zhang, Junling;
Zhang, Huihui;
Zhu, Ling

Publication type:

Article