Cytosine Usage Modulates the Correlation between CDS Length and CG Content in Prokaryotic Genomes.
- Published in:
- Molecular Biology & Evolution, 2006, v. 23, n. 7, p. 1450, doi. 10.1093/molbev/msl012
- By:
- Publication type:
- Article
Works by Xuhua Xia
Results: 84
1
2
Protein Structure, Neighbor Effect, and a New Index of Amino Acid Dissimilarities.
- Published in:
- Molecular Biology & Evolution, 2002, v. 19, n. 1, p. 58, doi. 10.1093/oxfordjournals.molbev.a003982
- By:
- Publication type:
- Article
3
Self-Organizing Map for Characterizing Heterogeneous Nucleotide and Amino Acid Sequence Motifs.
- Published in:
- Computation, 2017, v. 5, n. 4, p. 43, doi. 10.3390/computation5040043
- By:
- Publication type:
- Article
4
Characterization of the diversity of type IV secretion system-encoding plasmids in Acinetobacter.
- Published in:
- Emerging Microbes & Infections, 2024, v. 13, n. 1, p. 1, doi. 10.1080/22221751.2024.2320929
- By:
- Publication type:
- Article
5
Rooting and Dating Large SARS-CoV-2 Trees by Modeling Evolutionary Rate as a Function of Time.
- Published in:
- Viruses (1999-4915), 2023, v. 15, n. 3, p. 684, doi. 10.3390/v15030684
- By:
- Publication type:
- Article
6
Dating the Common Ancestor from an NCBI Tree of 83688 High-Quality and Full-Length SARS-CoV-2 Genomes.
- Published in:
- Viruses (1999-4915), 2021, v. 13, n. 9, p. 1790, doi. 10.3390/v13091790
- By:
- Publication type:
- Article
7
Domains and Functions of Spike Protein in SARS-Cov-2 in the Context of Vaccine Design.
- Published in:
- Viruses (1999-4915), 2021, v. 13, n. 1, p. 109, doi. 10.3390/v13010109
- By:
- Publication type:
- Article
8
Differential selection and mutation between dsDNA and ssDNA phages shape the evolution of their genomic AT percentage.
- Published in:
- BMC Genetics, 2005, v. 6, p. 20, doi. 10.1186/1471-2156-6-20
- By:
- Publication type:
- Article
9
An Extensive Study of Mutation and Selection on the Wobble Nucleotide in tRNA Anticodons in Fungal Mitochondrial Genomes.
- Published in:
- Journal of Molecular Evolution, 2008, v. 66, n. 5, p. 484, doi. 10.1007/s00239-008-9102-8
- By:
- Publication type:
- Article
10
Thermal Adaptation of the Small Subunit Ribosomal RNA Gene: A Comparative Study.
- Published in:
- Journal of Molecular Evolution, 2006, v. 63, n. 1, p. 120, doi. 10.1007/s00239-005-0255-4
- By:
- Publication type:
- Article
11
DNA Methylation and Mycoplasma Genomes.
- Published in:
- Journal of Molecular Evolution, 2003, v. 57, p. S21, doi. 10.1007/s00239-003-0003-6
- By:
- Publication type:
- Article
12
Effects of GC Content and Mutational Pressure on the Lengths of Exons and Coding Sequences.
- Published in:
- Journal of Molecular Evolution, 2003, v. 56, n. 3, p. 362, doi. 10.1007/s00239-002-2406-1
- By:
- Publication type:
- Article
13
Clinical characteristics of neonatal fulminant necrotizing enterocolitis in a tertiary Children's hospital in the last 10 years.
- Published in:
- PLoS ONE, 2019, v. 14, n. 11, p. 1, doi. 10.1371/journal.pone.0224880
- By:
- Publication type:
- Article
14
AMADA: analysis of microarray data.
- Published in:
- Bioinformatics, 2001, v. 17, n. 6, p. 569, doi. 10.1093/bioinformatics/17.6.569
- By:
- Publication type:
- Article
15
Mating system of the meadow vole, Microtus pennsylvanicus
- Published in:
- Behavioral Ecology, 1993, v. 4, n. 1, p. 83, doi. 10.1093/beheco/4.1.83
- By:
- Publication type:
- Article
16
Horizontal Gene Transfer and Drug Resistance Involving Mycobacterium tuberculosis.
- Published in:
- Antibiotics (2079-6382), 2023, v. 12, n. 9, p. 1367, doi. 10.3390/antibiotics12091367
- By:
- Publication type:
- Article
17
Detailed Dissection and Critical Evaluation of the Pfizer/BioNTech and Moderna mRNA Vaccines.
- Published in:
- Vaccines, 2021, v. 9, n. 7, p. 734, doi. 10.3390/vaccines9070734
- By:
- Publication type:
- Article
18
Phylogeographic Analysis for Understanding Origin, Speciation, and Biogeographic Expansion of Invasive Asian Hornet, Vespa velutina Lepeletier, 1836 (Hymenoptera, Vespidae).
- Published in:
- Life (2075-1729), 2024, v. 14, n. 10, p. 1293, doi. 10.3390/life14101293
- By:
- Publication type:
- Article
19
Phylogeographic Reconstruction to Trace the Source Population of Asian Giant Hornet Caught in Nanaimo in Canada and Blaine in the USA.
- Published in:
- Life (2075-1729), 2024, v. 14, n. 3, p. 283, doi. 10.3390/life14030283
- By:
- Publication type:
- Article
20
Improving Phylogenetic Signals of Mitochondrial Genes Using a New Method of Codon Degeneration.
- Published in:
- Life (2075-1729), 2020, v. 10, n. 9, p. 171, doi. 10.3390/life10090171
- By:
- Publication type:
- Article
21
Conservation of griseofulvin genes in the gsf gene cluster among fungal genomes.
- Published in:
- G3: Genes | Genomes | Genetics, 2022, v. 12, n. 2, p. 1, doi. 10.1093/g3journal/jkab399
- By:
- Publication type:
- Article
22
ARSDA: A New Approach for Storing, Transmitting and Analyzing Transcriptomic Data.
- Published in:
- G3: Genes | Genomes | Genetics, 2017, v. 7, n. 12, p. 3839, doi. 10.1534/g3.117.300271
- By:
- Publication type:
- Article
23
How Changes in Anti-SD Sequences Would Affect SD Sequences in Escherichia coli and Bacillus subtilis.
- Published in:
- G3: Genes | Genomes | Genetics, 2017, v. 7, n. 5, p. 1607, doi. 10.1534/g3.117.039305
- By:
- Publication type:
- Article
24
Post-Alignment Adjustment and Its Automation.
- Published in:
- Genes, 2021, v. 12, n. 11, p. 1809, doi. 10.3390/genes12111809
- By:
- Publication type:
- Article
25
Beyond Trees: Regulons and Regulatory Motif Characterization.
- Published in:
- Genes, 2020, v. 11, n. 9, p. 995, doi. 10.3390/genes11090995
- By:
- Publication type:
- Article
26
Unique Shine–Dalgarno Sequences in Cyanobacteria and Chloroplasts Reveal Evolutionary Differences in Their Translation Initiation.
- Published in:
- Genome Biology & Evolution, 2019, v. 11, n. 11, p. 3194, doi. 10.1093/gbe/evz227
- By:
- Publication type:
- Article
27
The Evolution and Functional Diversification of the Deubiquitinating Enzyme Superfamily.
- Published in:
- Genome Biology & Evolution, 2017, v. 9, n. 3, p. 558, doi. 10.1093/gbe/evx020
- By:
- Publication type:
- Article
28
Phylogenetic Analyses: A Toolbox Expanding towards Bayesian Methods.
- Published in:
- International Journal of Plant Genomics, 2008, v. 2008, p. 1, doi. 10.1155/2008/683509
- By:
- Publication type:
- Article
29
Mesophiles vs. Thermophiles: Untangling the Hot Mess of Intrinsically Disordered Proteins and Growth Temperature of Bacteria.
- Published in:
- International Journal of Molecular Sciences, 2024, v. 25, n. 4, p. 2000, doi. 10.3390/ijms25042000
- By:
- Publication type:
- Article
30
Computational Design of Novel Griseofulvin Derivatives Demonstrating Potential Antibacterial Activity: Insights from Molecular Docking and Molecular Dynamics Simulation.
- Published in:
- International Journal of Molecular Sciences, 2024, v. 25, n. 2, p. 1039, doi. 10.3390/ijms25021039
- By:
- Publication type:
- Article
31
Quantitative Trait Locus Mapping of Marsh Spot Disease Resistance in Cranberry Common Bean (Phaseolus vulgaris L.).
- Published in:
- International Journal of Molecular Sciences, 2022, v. 23, n. 14, p. 7639, doi. 10.3390/ijms23147639
- By:
- Publication type:
- Article
32
In Silico Molecular Dynamics of Griseofulvin and Its Derivatives Revealed Potential Therapeutic Applications for COVID-19.
- Published in:
- International Journal of Molecular Sciences, 2022, v. 23, n. 13, p. 6889, doi. 10.3390/ijms23136889
- By:
- Publication type:
- Article
33
Translation Control of HAC1 by Regulation of Splicing in Saccharomyces cerevisiae.
- Published in:
- International Journal of Molecular Sciences, 2019, v. 20, n. 12, p. 2860, doi. 10.3390/ijms20122860
- By:
- Publication type:
- Article
34
Evolution of the highly networked deubiquitinating enzymes USP4, USP15, and USP11.
- Published in:
- BMC Evolutionary Biology, 2015, v. 15, p. 1, doi. 10.1186/s12862-015-0511-1
- By:
- Publication type:
- Article
35
Drug efficacy and toxicity prediction: an innovative application of transcriptomic data.
- Published in:
- Cell Biology & Toxicology, 2020, v. 36, n. 6, p. 591, doi. 10.1007/s10565-020-09552-2
- By:
- Publication type:
- Article
36
Identification of host receptors for viral entry and beyond: a perspective from the spike of SARS-CoV-2.
- Published in:
- Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1188249
- By:
- Publication type:
- Article
37
The cost of wobble translation in fungal mitochondrial genomes: integration of two traditional hypotheses.
- Published in:
- BMC Evolutionary Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2148-8-211
- By:
- Publication type:
- Article
38
Clinical characteristics of hypercalcemic crises in a tertiary children's hospital.
- Published in:
- Endocrine (1355008X), 2023, v. 81, n. 1, p. 175, doi. 10.1007/s12020-023-03347-1
- By:
- Publication type:
- Article
39
Extreme Genomic CpG Deficiency in SARS-CoV-2 and Evasion of Host Antiviral Defense.
- Published in:
- Molecular Biology & Evolution, 2020, v. 37, n. 9, p. 2699, doi. 10.1093/molbev/msaa094
- By:
- Publication type:
- Article
40
DAMBE7: New and Improved Tools for Data Analysis in Molecular Biology and Evolution.
- Published in:
- Molecular Biology & Evolution, 2018, v. 35, n. 6, p. 1550, doi. 10.1093/molbev/msy073
- By:
- Publication type:
- Article
41
Coevolution between Stop Codon Usage and Release Factors in Bacterial Species.
- Published in:
- Molecular Biology & Evolution, 2016, v. 33, n. 9, p. 2357, doi. 10.1093/molbev/msw107
- By:
- Publication type:
- Article
42
Differential Codon Adaptation between dsDNA and ssDNA Phages in Escherichia coli.
- Published in:
- Molecular Biology & Evolution, 2014, v. 31, n. 6, p. 1606, doi. 10.1093/molbev/msu087
- By:
- Publication type:
- Article
43
DAMBE5: A Comprehensive Software Package for Data Analysis in Molecular Biology and Evolution.
- Published in:
- Molecular Biology & Evolution, 2013, v. 30, n. 7, p. 1720, doi. 10.1093/molbev/mst064
- By:
- Publication type:
- Article
44
An Improved Implementation of Effective Number of Codons (Nc).
- Published in:
- Molecular Biology & Evolution, 2013, v. 30, n. 1, p. 191, doi. 10.1093/molbev/mss201
- By:
- Publication type:
- Article
45
HIV-1 Modulates the tRNA Pool to Improve Translation Efficiency.
- Published in:
- Molecular Biology & Evolution, 2011, v. 28, n. 6, p. 1827, doi. 10.1093/molbev/msr005
- By:
- Publication type:
- Article
46
Genetic Variation in Clones ofPseudomonas pseudoalcaligenesAfter Ten Months of Selection in Different Thermal Environments in the Laboratory.
- Published in:
- Current Microbiology, 2005, v. 50, n. 5, p. 238, doi. 10.1007/s00284-004-4449-6
- By:
- Publication type:
- Article
47
Morphological Changes of Pseudomonas pseudoalcaligenes in Response to Temperature Selection.
- Published in:
- Current Microbiology, 2003, v. 46, n. 2, p. 0120, doi. 10.1007/s00284-002-3824-4
- By:
- Publication type:
- Article
48
An improved estimation of tRNA expression to better elucidate the coevolution between tRNA abundance and codon usage in bacteria.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-39369-x
- By:
- Publication type:
- Article
49
Inheritance of marsh spot disease resistance in cranberry common bean (Phaseolus vulgaris L.).
- Published in:
- Crop Journal (2095-5421), 2022, v. 10, n. 2, p. 456, doi. 10.1016/j.cj.2021.05.013
- By:
- Publication type:
- Article
50
Mural granulosa cell gene expression associated with oocyte developmental competence.
- Published in:
- Journal of Ovarian Research, 2010, v. 3, n. 1, p. 1, doi. 10.1186/1757-2215-3-6
- By:
- Publication type:
- Article