Works by Grohmann, Dina

Results: 40

Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 12, p. 4040, doi. 10.1093/nar/gkq135

By:

Hirtreiter, Angela;
Damsma, Gerke E.;
Cheung, Alan C. M.;
Klose, Daniel;
Grohmann, Dina;
Vojnic, Erika;
Martin, Andrew C. R.;
Cramer, Patrick;
Werner, Finn

Publication type:

Article

Molecular mechanisms of RNA polymerase—the F/E (RPB4/7) complex is required for high processivity in vitro.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 585, doi. 10.1093/nar/gkp928

By:

Hirtreiter, Angela;
Grohmann, Dina;
Werner, Finn

Publication type:

Article

Specific binding of a hexanucleotide to HIV-1 reverse transcriptase: a novel class of bioactive molecules.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 19, p. 5631, doi. 10.1093/nar/gkl533

By:

Mescalchin, Alessandra;
Wünsche, Winfried;
Laufer, Sandra D.;
Grohmann, Dina;
Restle, Tobias;
Sczakiel, Georg

Publication type:

Article

The archaeal Lsm protein from Pyrococcus furiosus binds co-transcriptionally to poly(U)-rich target RNAs.

Published in:

Biological Chemistry, 2023, v. 404, n. 11/12, p. 1085, doi. 10.1515/hsz-2023-0215

By:

Reichelt, Robert;
Rothmeier, Tamara;
Grünberger, Felix;
Willkomm, Sarah;
Bruckmann, Astrid;
Hausner, Winfried;
Grohmann, Dina

Publication type:

Article

Evolution of multisubunit RNA polymerases in the three domains of life.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 2, p. 85, doi. 10.1038/nrmicro2507

By:

Werner, Finn;
Grohmann, Dina

Publication type:

Article

A Starting Point for Fluorescence-Based Single-Molecule Measurements in Biomolecular Research.

Published in:

Molecules, 2014, v. 19, n. 10, p. 15824, doi. 10.3390/molecules191015824

By:

Gust, Alexander;
Zander, Adrian;
Gietl, Andreas;
Holzmeister, Phil;
Schulz, Sarah;
Lalkens, Birka;
Tinnefeld, Philip;
Grohmann, Dina

Publication type:

Article

Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA polymerase III transcription initiation.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00126-1

By:

Gouge, Jerome;
Guthertz, Nicolas;
Kramm, Kevin;
Dergai, Oleksandr;
Abascal-Palacios, Guillermo;
Satia, Karishma;
Cousin, Pascal;
Hernandez, Nouria;
Grohmann, Dina;
Vannini, Alessandro

Publication type:

Article

Small Molecule Inhibitors Targeting HIV-1 Reverse Transcriptase Dimerization.

Published in:

ChemBioChem, 2008, v. 9, n. 6, p. 916, doi. 10.1002/cbic.200700669

By:

Grohmann, Dina;
Corradi, Valentina;
Elbasyouny, Mira;
Baude, Annika;
Horenkamp, Florian;
Laufer, Sandra D.;
Manetti, Fabrizio;
Botta, Maurizio;
Restle, Tobias

Publication type:

Article

Mechanistic Insights into Archaeal and Human Argonaute Substrate Binding and Cleavage Properties.

Published in:

PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0164695

By:

Willkomm, Sarah;
Zander, Adrian;
Grohmann, Dina;
Restle, Tobias

Publication type:

Article

Site‐Specific Labelling of Native Mammalian Proteins for Single‐Molecule FRET Measurements.

Published in:

ChemBioChem, 2018, v. 19, n. 8, p. 780, doi. 10.1002/cbic.201700696

By:

Gust, Alexander;
Jakob, Leonhard;
Zeitler, Daniela M.;
Bruckmann, Astrid;
Kramm, Kevin;
Willkomm, Sarah;
Tinnefeld, Philip;
Meister, Gunter;
Grohmann, Dina

Publication type:

Article

The transcriptional regulator EarA and intergenic terminator sequences modulate archaellation in Pyrococcus furiosus.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1241399

By:

Stöckl, Richard;
Nißl, Laura;
Reichelt, Robert;
Rachel, Reinhard;
Grohmann, Dina;
Grünberger, Felix

Publication type:

Article

Transcription initiation factor TBP: old friend new questions.

Published in:

Biochemical Society Transactions, 2019, v. 47, n. 1, p. 411, doi. 10.1042/BST20180623

By:

Kramm, Kevin;
Engel, Christoph;
Grohmann, Dina

Publication type:

Article

Modern biophysical approaches probe transcription-factor-induced DNA bending and looping.

Published in:

Biochemical Society Transactions, 2013, v. 41, n. 1, p. 368, doi. 10.1042/BST20120301

By:

Gietl, Andreas;
Grohmann, Dina

Publication type:

Article

Archaeology of RNA polymerase: factor swapping during the transcription cycle.

Published in:

Biochemical Society Transactions, 2013, v. 41, n. 1, p. 362, doi. 10.1042/BST20120274

By:

Blombach, Fabian;
Daviter, Tina;
Fielden, Daniel;
Grohmann, Dina;
Smollett, Katherine;
Werner, Finn

Publication type:

Article

Mechanistic insights into Lhr helicase function in DNA repair.

Published in:

Biochemical Journal, 2020, v. 477, n. 16, p. 2935, doi. 10.1042/BCJ20200379

By:

Buckley, Ryan J.;
Kramm, Kevin;
Cooper, Christopher D. O.;
Grohmann, Dina;
Bolt, Edward L.

Publication type:

Article

MinD2 modulates cell shape and motility in the archaeon Haloferax volcanii.

Published in:

Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1474570

By:

Patro, Megha;
Grünberger, Felix;
Sivabalasarma, Shamphavi;
Gfrerer, Sabrina;
Rodriguez-Franco, Marta;
Nußbaum, Phillip;
Grohmann, Dina;
Ithurbide, Solenne;
Albers, Sonja-Verena

Publication type:

Article

Endo-bind-n-seq: identifying RNA motifs of RNA binding proteins isolated from endogenous sources.

Published in:

Life Science Alliance, 2025, v. 8, n. 2, p. 1, doi. 10.26508/lsa.202402782

By:

Hanelt, Tiana Nicole;
Treiber, Nora;
Treiber, Thomas;
Lehmann, Gerhard;
Eichner, Norbert;
Rothmeier, Tamara;
Schmid, Georg;
Reichelt, Robert;
Zambelli, Federico;
Pavesi, Giulio;
Grohmann, Dina;
Meister, Gunter

Publication type:

Article

Single-molecule FRET supports the two-state model of Argonaute action.

Published in:

RNA Biology, 2014, v. 11, n. 1, p. 1, doi. 10.4161/rna.27446

By:

Zander, Adrian;
Hholzmeister, Phil;
Klose, Daniel;
Tinnefeld, Philip;
Grohmann, Dina

Publication type:

Article

Hold on!

Published in:

RNA Biology, 2010, v. 7, n. 3, p. 310, doi. 10.4161/rna.7.3.11912

By:

Grohmann, Dina;
Werner, Finn

Publication type:

Article

A Prokaryotic Twist on Argonaute Function.

Published in:

Life (2075-1729), 2015, v. 5, n. 1, p. 538, doi. 10.3390/life5010538

By:

Willkomm, Sarah;
Zander, Adrian;
Gust, Alexander;
Grohmann, Dina

Publication type:

Article

Next Generation DNA-Seq and Differential RNA-Seq Allow Re-annotation of the Pyrococcus furiosus DSM 3638 Genome and Provide Insights Into Archaeal Antisense Transcription.

Published in:

Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01603

By:

Grünberger, Felix;
Reichelt, Robert;
Bunk, Boyke;
Spröer, Cathrin;
Overmann, Jörg;
Rachel, Reinhard;
Grohmann, Dina;
Hausner, Winfried

Publication type:

Article

Allosteric activation of CRISPR-Cas12a requires the concerted movement of the bridge helix and helix 1 of the RuvC II domain.

Published in:

Nucleic Acids Research, 2022, v. 50, n. 17, p. 10153, doi. 10.1093/nar/gkac767

By:

Wörle, Elisabeth;
Newman, Anthony;
D'Silva, Jovita;
Burgio, Gaetan;
Grohmann, Dina

Publication type:

Article

Probing the stability of the SpCas9–DNA complex after cleavage.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 21, p. 12411, doi. 10.1093/nar/gkab1072

By:

Aldag, Pierre;
Welzel, Fabian;
Jakob, Leonhard;
Schmidbauer, Andreas;
Rutkauskas, Marius;
Fettes, Fergus;
Grohmann, Dina;
Seidel, Ralf

Publication type:

Article

Decoupling the bridge helix of Cas12a results in a reduced trimming activity, increased mismatch sensitivity and impaired conformational transitions.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 9, p. 5278, doi. 10.1093/nar/gkab286

By:

Wörle, Elisabeth;
Jakob, Leonhard;
Schmidbauer, Andreas;
Zinner, Gabriel;
Grohmann, Dina

Publication type:

Article

Displacement of the transcription factor B reader domain during transcription initiation.

Published in:

Nucleic Acids Research, 2018, v. 46, n. 19, p. 10066, doi. 10.1093/nar/gky699

By:

Dexl, Stefan;
Reichelt, Robert;
Kraatz, Katharina;
Schulz, Sarah;
Grohmann, Dina;
Bartlett, Michael;
Thomm, Michael

Publication type:

Article

Eukaryotic and archaeal TBP and TFB/TF(II)B follow different promoter DNA bending pathways.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 10, p. 6219, doi. 10.1093/nar/gku273

By:

Gietl, Andreas;
Holzmeister, Phil;
Blombach, Fabian;
Schulz, Sarah;
von Voithenberg, Lena Voith;
Lamb, Don C.;
Werner, Finn;
Tinnefeld, Philip;
Grohmann, Dina

Publication type:

Article

DNA origami as biocompatible surface to match single-molecule and ensemble experiments.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 14, p. e110, doi. 10.1093/nar/gks326

By:

Gietl, Andreas;
Holzmeister, Phil;
Grohmann, Dina;
Tinnefeld, Philip

Publication type:

Article

Repression of RNA polymerase by the archaeo-viral regulator ORF145/RIP.

Published in:

Nature Communications, 2016, v. 7, n. 11, p. 13595, doi. 10.1038/ncomms13595

By:

Sheppard, Carol;
Blombach, Fabian;
Belsom, Adam;
Schulz, Sarah;
Daviter, Tina;
Smollett, Katherine;
Mahieu, Emilie;
Erdmann, Susanne;
Tinnefeld, Philip;
Garrett, Roger;
Grohmann, Dina;
Rappsilber, Juri;
Werner, Finn

Publication type:

Article

Complete architecture of the archaeal RNA polymerase open complex from single-molecule FRET and NPS.

Published in:

Nature Communications, 2015, v. 6, n. 1, p. 6161, doi. 10.1038/ncomms7161

By:

Nagy, Julia;
Grohmann, Dina;
Cheung, Alan C.M.;
Schulz, Sarah;
Smollett, Katherine;
Werner, Finn;
Michaelis, Jens

Publication type:

Article

Enhancing single-molecule fluorescence with nanophotonics.

Published in:

FEBS Letters, 2014, v. 588, n. 19, p. 3547, doi. 10.1016/j.febslet.2014.06.016

By:

Acuna, Guillermo;
Grohmann, Dina;
Tinnefeld, Philip

Publication type:

Article

DNA origami-based single-molecule force spectroscopy elucidates RNA Polymerase III pre-initiation complex stability.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16702-x

By:

Kramm, Kevin;
Schröder, Tim;
Gouge, Jerome;
Vera, Andrés Manuel;
Gupta, Kapil;
Heiss, Florian B.;
Liedl, Tim;
Engel, Christoph;
Berger, Imre;
Vannini, Alessandro;
Tinnefeld, Philip;
Grohmann, Dina

Publication type:

Article

Simulation vs. Reality: A Comparison of In Silico Distance Predictions with DEER and FRET Measurements.

Published in:

PLoS ONE, 2012, v. 7, n. 6, p. 1, doi. 10.1371/journal.pone.0039492

By:

Klose, Daniel;
Klare, Johann P.;
Grohmann, Dina;
Kay, Christopher W. M.;
Werner, Finn;
Steinhoff, Heinz-Jürgen

Publication type:

Article

A novel interdomain consortium from a Costa Rican oil well composed of Methanobacterium cahuitense sp. nov. and Desulfomicrobium aggregans sp. nov.

Published in:

Archives of Microbiology, 2023, v. 205, n. 5, p. 1, doi. 10.1007/s00203-023-03533-9

By:

Dengler, Linda;
Meier, Julia;
Klingl, Andreas;
Nißl, Laura;
Bellack, Annett;
Grohmann, Dina;
Rachel, Reinhard;
Huber, Harald

Publication type:

Article

Methanofollis propanolicus sp. nov., a novel archaeal isolate from a Costa Rican oil well that uses propanol for methane production.

Published in:

Archives of Microbiology, 2022, v. 204, n. 9, p. 1, doi. 10.1007/s00203-022-03152-w

By:

Dengler, Linda;
Meier, Julia;
Grünberger, Felix;
Bellack, Annett;
Rachel, Reinhard;
Grohmann, Dina;
Huber, Harald

Publication type:

Article

Coupling of Transcription and Translation in Archaea: Cues From the Bacterial World.

Published in:

Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.661827

By:

Weixlbaumer, Albert;
Grünberger, Felix;
Werner, Finn;
Grohmann, Dina

Publication type:

Article

CopR, a Global Regulator of Transcription to Maintain Copper Homeostasis in Pyrococcus furiosus.

Published in:

Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.613532

By:

Grünberger, Felix;
Reichelt, Robert;
Waege, Ingrid;
Ned, Verena;
Bronner, Korbinian;
Kaljanac, Marcell;
Weber, Nina;
El Ahmad, Zubeir;
Knauss, Lena;
Madej, M. Gregor;
Ziegler, Christine;
Grohmann, Dina;
Hausner, Winfried

Publication type:

Article

Structural basis of archaeal RNA polymerase transcription elongation and Spt4/5 recruitment.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 10, p. 6017, doi. 10.1093/nar/gkae282

By:

Tarău, Daniela;
Grünberger, Felix;
Pilsl, Michael;
Reichelt, Robert;
Heiß, Florian;
König, Sabine;
Urlaub, Henning;
Hausner, Winfried;
Engel, Christoph;
Grohmann, Dina

Publication type:

Article

Single-molecule FRET uncovers hidden conformations and dynamics of human Argonaute 2.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31480-4

By:

Willkomm, Sarah;
Jakob, Leonhard;
Kramm, Kevin;
Graus, Veronika;
Neumeier, Julia;
Meister, Gunter;
Grohmann, Dina

Publication type:

Article

The HCF136 protein is essential for assembly of the photosystem II reaction center in Arabidopsis thaliana

Published in:

FEBS Letters, 2002, v. 532, n. 1/2, p. 85, doi. 10.1016/S0014-5793(02)03634-7

By:

Plücken, Henning;
Müller, Bernd;
Grohmann, Dina;
Westhoff, Peter;
Eichacker, Lutz A.

Publication type:

Article

Same same but different: The evolution of TBP in archaea and their eukaryotic offspring.

Published in:

Transcription (2154-1264), 2017, v. 8, n. 3, p. 162, doi. 10.1080/21541264.2017.1289879

By:

Blombach, Fabian;
Grohmann, Dina

Publication type:

Article