Works by Facchiano, Angelo

Results: 84

GeenaR: A Web Tool for Reproducible MALDI-TOF Analysis.

Published in:

Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.635814

By:

Del Prete, Eugenio;
Facchiano, Angelo;
Profumo, Aldo;
Angelini, Claudia;
Romano, Paolo

Publication type:

Article

Editorial: Artificial Intelligence Bioinformatics: Development and Application of Tools for Omics and Inter-Omics Studies.

Published in:

2020

By:

Chicco, Davide;
Heider, Dominik;
Facchiano, Angelo

Publication type:

Editorial

Sirtuin Inhibitor Cambinol Induces Cell Differentiation and Differently Interferes with SIRT1 and 2 at the Substrate Binding Site.

Published in:

Biomedicines, 2023, v. 11, n. 6, p. 1624, doi. 10.3390/biomedicines11061624

By:

Giordano, Deborah;
Scafuri, Bernardina;
De Masi, Luigi;
Capasso, Lucia;
Maresca, Viviana;
Altucci, Lucia;
Nebbioso, Angela;
Facchiano, Angelo;
Bontempo, Paola

Publication type:

Article

Structural Dissection of Viral Spike-Protein Binding of SARS-CoV-2 and SARS-CoV-1 to the Human Angiotensin-Converting Enzyme 2 (ACE2) as Cellular Receptor.

Published in:

Biomedicines, 2021, v. 9, n. 8, p. 1038, doi. 10.3390/biomedicines9081038

By:

Giordano, Deborah;
De Masi, Luigi;
Argenio, Maria Antonia;
Facchiano, Angelo

Publication type:

Article

Molecular Docking Simulations on Histone Deacetylases (HDAC)-1 and -2 to Investigate the Flavone Binding.

Published in:

Biomedicines, 2020, v. 8, n. 12, p. 568, doi. 10.3390/biomedicines8120568

By:

Scafuri, Bernardina;
Bontempo, Paola;
Altucci, Lucia;
De Masi, Luigi;
Facchiano, Angelo

Publication type:

Article

Active Sequences Collection (ASC) database: a new tool to assign functions to protein sequences.

Published in:

Nucleic Acids Research, 2003, v. 31, n. 1, p. 379, doi. 10.1093/nar/gkg042

By:

Facchiano, Angelo M.;
Facchiano, Antonio;
Facchiano, Francesco

Publication type:

Article

Effect of positive charge in VIP <sup>16</sup>γ-glutamyl diamino derivatives on hVPAC1 and hVPAC2 receptor function.

Published in:

Journal of Peptide Science, 2008, v. 14, n. 1, p. 102, doi. 10.1002/psc.925

By:

de Maria, Salvatore;
Metafora, Vittoria;
Metafora, Salvatore;
Ravagnan, Gianpietro;
Cartení, Maria;
Pontoni, Gabriele;
Facchiano, Angelo;
Lepretti, Marilena;
Severino, Beatrice;
Caliendo, Giuseppe;
Santagada, Vincenzo;
Langer, Ingrid;
Robberecht, Patrick

Publication type:

Article

Drug Design by Pharmacophore and Virtual Screening Approach.

Published in:

Pharmaceuticals (14248247), 2022, v. 15, n. 5, p. 646, doi. 10.3390/ph15050646

By:

Giordano, Deborah;
Biancaniello, Carmen;
Argenio, Maria Antonia;
Facchiano, Angelo

Publication type:

Article

Uncommon functional properties of the first piscine 26S proteasome from the Antarctic notothenioid Trematomus bernacchii.

Published in:

Bioscience Reports, 2016, v. 36, n. 2, p. 1, doi. 10.1042/BSR20160022

By:

Gogliettino, Marta;
Balestrieri, Marco;
Riccio, Alessia;
Facchiano, Angelo;
Fusco, Carmela;
Palazzo, Vincenzo Cecere;
Rossi, Mosè;
Cocca, Ennio;
Palmieri, Gianna

Publication type:

Article

Role of ‘shared epitope’ and other citrullination-sites in rheumatoid arthritis and in melanoma.

Published in:

Expert Opinion on Therapeutic Targets, 2017, v. 21, n. 10, p. 993, doi. 10.1080/14728222.2017.1370776

By:

D’Arcangelo, Daniela;
Facchiano, Antonio;
Facchiano, Angelo M.

Publication type:

Article

Probing the modelled structure of Wheatwin1 by controlled proteolysis and sequence analysis of unfractionated digestion mixtures.

Published in:

Proteins, 1999, v. 36, n. 2, p. 192, doi. 10.1002/(SICI)1097-0134(19990801)36:2<192::AID-PROT5>3.0.CO;2-L

By:

Caporale, Carlo;
Caruso, Carla;
Facchiano, Angelo;
Nobile, Monica;
Leonardi, Luca;
Bertini, Laura;
Colonna, Giovanni;
Buonocore, Vincenzo

Publication type:

Article

Gene expression monitoring in hormone-responsive human breast cancer cells during estrogen-induced cell cycle progression.

Published in:

2001

By:

Cicatiello, Luigi;
Facchiano, Angelo;
Calogero, Raffaele;
De Bortoli, Michele;
Bresciani, Francesco;
Weisz, Alessandro

Publication type:

Abstract

A novel class of bifunctional acylpeptide hydrolases - potential role in the antioxidant defense systems of the Antarctic fish Trematomus bernacchii.

Published in:

FEBS Journal, 2014, v. 281, n. 1, p. 401, doi. 10.1111/febs.12610

By:

Gogliettino, Marta;
Riccio, Alessia;
Balestrieri, Marco;
Cocca, Ennio;
Facchiano, Angelo;
D'Arco, Teresa M.;
Tesoro, Clara;
Rossi, Mosè;
Palmieri, Gianna

Publication type:

Article

Pyrimidine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus– biochemical characterization and homology modeling.

Published in:

FEBS Journal, 2008, v. 275, n. 8, p. 1900, doi. 10.1111/j.1742-4658.2008.06348.x

By:

Porcelli, Marina;
Concilio, Luigi;
Peluso, Iolanda;
Marabotti, Anna;
Facchiano, Angelo;
Cacciapuoti, Giovanna

Publication type:

Article

Modeling the 3D structure of wheat subtilisin/chymotrypsin inhibitor (WSCI). Probing the reactive site with two susceptible proteinases by time-course analysis and molecular dynamics simulations.

Published in:

Biological Chemistry, 2006, v. 387, n. 7, p. 931, doi. 10.1515/BC.2006.117

By:

Facchiano, Angelo M.;
Costantini, Susan;
Di Maro, Antimo;
Panichi, Daniela;
Chambery, Angela;
Parente, Augusto;
Di Gennaro, Simone;
Poerio, Elia

Publication type:

Article

HELM: searching for helix motifs within protein sequences.

Published in:

Bioinformatics, 2000, v. 16, n. 3, p. 292, doi. 10.1093/bioinformatics/16.3.292

By:

Facchiano, Angelo M.

Publication type:

Article

Deletion of a Single Lysine Residue at Position 292 of CAMK2A Disrupts Protein Function, Causing Severe Epileptic Encephalopathy and Intellectual Disability.

Published in:

Genes, 2023, v. 14, n. 7, p. 1353, doi. 10.3390/genes14071353

By:

Lintas, Carla;
Facchiano, Angelo;
Azzarà, Alessia;
Cassano, Ilaria;
Tabolacci, Claudio;
Galasso, Cinzia;
Gurrieri, Fiorella

Publication type:

Article

A Combination of Microarray-Based Profiling and Biocomputational Analysis Identified miR331-3p and hsa-let-7d-5p as Potential Biomarkers of Ulcerative Colitis Progression to Colorectal Cancer.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 11, p. 5699, doi. 10.3390/ijms25115699

By:

Chacon-Millan, Pilar;
Lama, Stefania;
Del Gaudio, Nunzio;
Gravina, Antonietta Gerarda;
Federico, Alessandro;
Pellegrino, Raffaele;
Luce, Amalia;
Altucci, Lucia;
Facchiano, Angelo;
Caraglia, Michele;
Stiuso, Paola

Publication type:

Article

Machine Learning as a Support for the Diagnosis of Type 2 Diabetes.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 7, p. 6775, doi. 10.3390/ijms24076775

By:

Agliata, Antonio;
Giordano, Deborah;
Bardozzo, Francesco;
Bottiglieri, Salvatore;
Facchiano, Angelo;
Tagliaferri, Roberto

Publication type:

Article

Transamidation Down-Regulates Intestinal Immunity of Recombinant α-Gliadin in HLA-DQ8 Transgenic Mice.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 13, p. 7019, doi. 10.3390/ijms22137019

By:

Rossi, Stefano;
Giordano, Deborah;
Mazzeo, Maria Fiorella;
Maurano, Francesco;
Luongo, Diomira;
Facchiano, Angelo;
Siciliano, Rosa Anna;
Rossi, Mauro

Publication type:

Article

Unusual Antioxidant Properties of 26S Proteasome Isolated from Cold-Adapted Organisms.

Published in:

International Journal of Molecular Sciences, 2017, v. 18, n. 8, p. 1605, doi. 10.3390/ijms18081605

By:

Gogliettino, Marta;
Cocca, Ennio;
Fusco, Carmela;
Agrillo, Bruna;
Riccio, Alessia;
Balestrieri, Marco;
Facchiano, Angelo;
Pepe, Antonio;
Palmieri, Gianna

Publication type:

Article

Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.

Published in:

Proteomics, 2011, v. 11, n. 1, p. 172, doi. 10.1002/pmic.201000217

By:

Tarallo, Roberta;
Bamundo, Angela;
Nassa, Giovanni;
Nola, Ernesto;
Paris, Ornella;
Ambrosino, Concetta;
Facchiano, Angelo;
Baumann, Marc;
Nyman, Tuula A.;
Weisz, Alessandro

Publication type:

Article

Molecular Aspects of Spike–ACE2 Interaction.

Published in:

Encyclopedia, 2022, v. 2, n. 1, p. 96, doi. 10.3390/encyclopedia2010007

By:

De Masi, Luigi;
Argenio, Maria Antonia;
Giordano, Deborah;
Facchiano, Angelo

Publication type:

Article

Molecular Docking of Natural Compounds for Potential Inhibition of AhR.

Published in:

Foods, 2023, v. 12, n. 10, p. 1953, doi. 10.3390/foods12101953

By:

Giordano, Deborah;
Facchiano, Angelo;
Moccia, Stefania;
Meola, Anna Maria Iole;
Russo, Gian Luigi;
Spagnuolo, Carmela

Publication type:

Article

multiple network-based bioinformatics pipeline for the study of molecular mechanisms in oncological diseases for personalized medicine.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab180

By:

Dotolo, Serena;
Marabotti, Anna;
Rachiglio, Anna Maria;
Abate, Riziero Esposito;
Benedetto, Marco;
Ciardiello, Fortunato;
Luca, Antonella De;
Normanno, Nicola;
Facchiano, Angelo;
Tagliaferri, Roberto

Publication type:

Article

Predicting the stability of mutant proteins by computational approaches: an overview.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa074

By:

Marabotti, Anna;
Scafuri, Bernardina;
Facchiano, Angelo

Publication type:

Article

A review on drug repurposing applicable to COVID-19.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 2, p. 726, doi. 10.1093/bib/bbaa288

By:

Dotolo, Serena;
Marabotti, Anna;
Facchiano, Angelo;
Tagliaferri, Roberto

Publication type:

Article

Bioinformatics methodologies for coeliac disease and its comorbidities.

Published in:

Briefings in Bioinformatics, 2020, v. 21, n. 1, p. 355, doi. 10.1093/bib/bby109

By:

Prete, Eugenio Del;
Facchiano, Angelo;
Liò, Pietro

Publication type:

Article

A hypothesis on the capacity of plant odorant-binding proteins to bind volatile isoprenoids based on in silico evidences.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.66741

By:

Giordano, Deborah;
Facchiano, Angelo;
D'Auria, Sabato;
Loreto, Francesco

Publication type:

Article

Editorial: Computational Proteomics and Integration of Data Resources for Advanced Studies in Life Sciences.

Published in:

2021

By:

Marabotti, Anna;
Romano, Paolo;
Facchiano, Angelo

Publication type:

Editorial

Homology modelling of the human eukaryotic initiation factor 5A (eIF-5A).

Published in:

Protein Engineering, 2001, v. 14, n. 11, p. 881, doi. 10.1093/protein/14.11.881

By:

Facchiano, Angelo M.;
Stiuso, Paola;
Chiusano, Maria Luisa;
Caraglia, Michele;
Giuberti, Gaia;
Marra, Monica;
Abbruzzese, Alberto;
Colonna, Giovanni

Publication type:

Article

Reply to comment.

Published in:

Protein Engineering, 1999, v. 12, n. 6, p. 438, doi. 10.1093/protein/12.6.438

By:

Facchiano, Angelo M.;
Colonna, Giovanni;
Ragone, Raffaele

Publication type:

Article

Comparative gene expression profiling reveals partially overlapping but distinct genomic actions of different antiestrogens in human breast cancer cells.

Published in:

Journal of Cellular Biochemistry, 2006, v. 98, n. 5, p. 1163, doi. 10.1002/jcb.20820

By:

Claudio Scafoglio;
Concetta Ambrosino;
Luigi Cicatiello;
Lucia Altucci;
Mario Ardovino;
Paola Bontempo;
Nicola Medici;
Anna Maria Molinari;
Angela Nebbioso;
Angelo Facchiano;
Raffaele A. Calogero;
Ran Elkon;
Nadia Menini;
Riccardo Ponzone;
Nicoletta Biglia;
Piero Sismondi;
Michele De Bortoli;
Alessandro Weisz

Publication type:

Article

The misuse of terms in scientific literature.

Published in:

2010

By:

Marabotti, Anna;
Facchiano, Angelo

Publication type:

Letter

Genomic diversity and novel genome-wide association with fruit morphology in Capsicum, from 746k polymorphic sites.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-46136-5

By:

Colonna, Vincenza;
D'Agostino, Nunzio;
Garrison, Erik;
Albrechtsen, Anders;
Meisner, Jonas;
Facchiano, Angelo;
Cardi, Teodoro;
Tripodi, Pasquale

Publication type:

Article

A novel point mutation in the ligand-binding domain of the human glucocorticoid receptor (hGR) in a patient with glucocorticoid resistance.

Published in:

International Journal on Disability & Human Development (De Gruyter), 2007, v. 6, n. 1, p. 105, doi. 10.1515/ijdhd.2007.6.1.105

By:

Cannavò, Salvatore;
Karl, Michael;
Santarpia, Libero;
Facchiano, Angelo;
Marabotti, Anna;
Trimarchi, Francesco;
Benvenga, Salvatore

Publication type:

Article

Energy-based prediction of amino acid-nucleotide base recognition.

Published in:

Journal of Computational Chemistry, 2008, v. 29, n. 12, p. 1955, doi. 10.1002/jcc.20954

By:

Marabotti, Anna;
Spyrakis, Francesca;
Facchiano, Angelo;
Cozzini, Pietro;
Alberti, Saverio;
Kellogg, Glen E.;
Mozzarelli, Andrea

Publication type:

Article

New computational strategy to analyze the interactions of ERα and ERβ with different ERE sequences.

Published in:

Journal of Computational Chemistry, 2007, v. 28, n. 6, p. 1031, doi. 10.1002/jcc.20582

By:

Marabotti, Anna;
Colonna, Giovanni;
Facchiano, Angelo

Publication type:

Article

Geena 2, improved automated analysis of MALDI/TOF mass spectra.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 247, doi. 10.1186/s12859-016-0911-2

By:

Romano, Paolo;
Profumo, Aldo;
Rocco, Mattia;
Mangerini, Rosa;
Ferri, Fabio;
Facchiano, Angelo

Publication type:

Article

Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics.

Published in:

BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S9-S1

By:

Facchiano, Angelo;
Angelini, Claudia;
Bosotti, Roberta;
Guffanti, Alessandro;
Marabotti, Anna;
Marangoni, Roberto;
Pascarella, Stefano;
Romano, Paolo;
Zanzoni, Andreas;
Helmer-Citterich, Manuela

Publication type:

Article

Integrating mutation data and structural analysis of the TP53 tumor-suppressor protein.

Published in:

Human Mutation, 2002, v. 19, n. 2, p. 149, doi. 10.1002/humu.10032

By:

Martin, Andrew C.R.;
Facchiano, Angelo M.;
Cuff, Alison L.;
Hernandez-Boussard, Tina;
Olivier, Magali;
Hainaut, Pierre;
Thornton, Janet M.

Publication type:

Article

Transglutaminase type 2 affects cell migration through post-translational modification of platelet-derived growth factor-BB.

Published in:

Amino Acids, 2017, v. 49, n. 3, p. 473, doi. 10.1007/s00726-016-2331-z

By:

Cordella, Martina;
Tabolacci, Claudio;
Rossi, Stefania;
Senatore, Cinzia;
Facchiano, Angelo;
D'Arcangelo, Daniela;
Facchiano, Antonio;
Facchiano, Francesco

Publication type:

Article

Tissue transglutaminase activity protects from cutaneous melanoma metastatic dissemination: an in vivo study.

Published in:

Amino Acids, 2013, v. 44, n. 1, p. 53, doi. 10.1007/s00726-012-1351-6

By:

Facchiano, Francesco;
D’Arcangelo, Daniela;
Lentini, Alessandro;
Rossi, Stefania;
Senatore, Cinzia;
Pannellini, Tania;
Tabolacci, Claudio;
Facchiano, Angelo M.;
Facchiano, Antonio;
Beninati, Simone

Publication type:

Article

Transglutaminase participates in the blockade of neurotransmitter release by tetanus toxin: evidence for a novel biological function.

Published in:

Amino Acids, 2010, v. 39, n. 1, p. 257, doi. 10.1007/s00726-009-0436-3

By:

Facchiano, Francesco;
Deloye, Florence;
Doussau, Frédéric;
Innamorati, Giulio;
Ashton, Anthony C.;
Dolly, J. Oliver;
Beninati, Simone;
Facchiano, Angelo;
Luini, Alberto;
Poulain, Bernard;
Benfenati, Fabio

Publication type:

Article

Structural and Functional Characterization of Lipoxygenases from Diatoms by Bioinformatics and Modelling Studies.

Published in:

Biomolecules (2218-273X), 2024, v. 14, n. 3, p. 276, doi. 10.3390/biom14030276

By:

Giordano, Deborah;
Bonora, Simone;
D'Orsi, Ilenia;
D'Alelio, Domenico;
Facchiano, Angelo

Publication type:

Article

Structure and Ligands Interactions of Citrus Tryptophan Decarboxylase by Molecular Modeling and Docking Simulations.

Published in:

Biomolecules (2218-273X), 2019, v. 9, n. 3, p. 117, doi. 10.3390/biom9030117

By:

Facchiano, Angelo;
Pignone, Domenico;
Servillo, Luigi;
Castaldo, Domenico;
De Masi, Luigi

Publication type:

Article

Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach.

Published in:

Biomolecules (2218-273X), 2019, v. 9, n. 1, p. 5, doi. 10.3390/biom9010005

By:

Dubey, Amit;
Dotolo, Serena;
Ramteke, Pramod W.;
Facchiano, Angelo;
Marabotti, Anna

Publication type:

Article

Editorial: Artificial intelligence and bioinformatics applications for omics and multi-omics studies.

Published in:

Frontiers in Genetics, 2024, p. 1, doi. 10.3389/fgene.2024.1371473

By:

Facchiano, Angelo;
Heider, Dominik;
Mutarelli, Margherita

Publication type:

Article

Health-Promoting Effects, Phytochemical Constituents and Molecular Genetic Profile of the Purple Carrot 'Purple Sun' (Daucus carota L.).

Published in:

Nutrients, 2024, v. 16, n. 15, p. 2505, doi. 10.3390/nu16152505

By:

Maresca, Viviana;
Capasso, Lucia;
Rigano, Daniela;
Stornaiuolo, Mariano;
Sirignano, Carmina;
Piacente, Sonia;
Cerulli, Antonietta;
Marallo, Nadia;
Basile, Adriana;
Nebbioso, Angela;
Giordano, Deborah;
Facchiano, Angelo;
De Masi, Luigi;
Bontempo, Paola

Publication type:

Article

Bioinformatics in Italy: BITS2012, the ninth annual meeting of the Italian Society of Bioinformatics.

Published in:

BMC Bioinformatics, 2013, v. 14, n. Suppl 7, p. 1, doi. 10.1186/1471-2105-14-S7-S1

By:

Gissi, Carmela;
Romano, Paolo;
Ferro, Alfredo;
Giugno, Rosalba;
Pulvirenti, Alfredo;
Facchiano, Angelo;
Helmer-Citterich, Manuela

Publication type:

Article