Works matching AU Dupuy, Denis

Results: 21

Insight into transcription factor gene duplication from Caenorhabditis elegans Promoterome-driven expression patterns.

Published in:

BMC Genomics, 2007, v. 8, p. 1, doi. 10.1186/1471-2164-8-27

By:

Reece-Hoyes, John S;
Shingles, Jane;
Dupuy, Denis;
Grove, Christian A;
Walhout, Albertha JM;
Vidal, Marc;
Hope, Ian A

Publication type:

Article

A gene expression fingerprint of C. elegans embryonic motor neurons.

Published in:

BMC Genomics, 2005, v. 6, p. 1, doi. 10.1186/1471-2164-6-42

By:

Fox, Rebecca M;
Von Stetina, Stephen E;
Barlow, Susan J;
Shaffer, Christian;
Olszewski, Kellen L;
Moore, Jason H;
Dupuy, Denis;
Vidal, Marc;
Miller III, David M

Publication type:

Article

In situ quantification of diverse titanium dioxide nanoparticles unveils selective endoplasmic reticulum stress-dependent toxicity.

Published in:

Nanotoxicology, 2017, v. 11, n. 1, p. 134, doi. 10.1080/17435390.2017.1278803

By:

Simon, Marina;
Saez, Gladys;
Muggiolu, Giovanna;
Lavenas, Magali;
Le Trequesser, Quentin;
Michelet, Claire;
Devès, Guillaume;
Barberet, Philippe;
Chevet, Eric;
Dupuy, Denis;
Delville, Marie-Hélène;
Seznec, Hervé

Publication type:

Article

Edgetic perturbation models of human inherited disorders.

Published in:

Molecular Systems Biology, 2009, v. 5, n. 1, p. 321, doi. 10.1038/msb.2009.80

By:

Zhong, Quan;
Simonis, Nicolas;
Li, Qian‐Ru;
Charloteaux, Benoit;
Heuze, Fabien;
Klitgord, Niels;
Tam, Stanley;
Yu, Haiyuan;
Venkatesan, Kavitha;
Mou, Danny;
Swearingen, Venus;
Yildirim, Muhammed A;
Yan, Han;
Dricot, Amélie;
Szeto, David;
Lin, Chenwei;
Hao, Tong;
Fan, Changyu;
Milstein, Stuart;
Dupuy, Denis

Publication type:

Article

Sarcoma cell-specific radiation sensitization by titanate scrolled nanosheets: insights from physicochemical analysis and transcriptomic profiling.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-53847-x

By:

Beaudier, Pierre;
Vilotte, Florent;
Simon, Marina;
Muggiolu, Giovanna;
Le Trequesser, Quentin;
Devès, Guillaume;
Plawinski, Laurent;
Mikael, Antoine;
Caron, Jérôme;
Kantor, Guy;
Dupuy, Denis;
Delville, Marie-Hélène;
Barberet, Philippe;
Seznec, Hervé

Publication type:

Article

Two RhoGEF isoforms with distinct localisation control furrow position during asymmetric cell division.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38912-9

By:

Montembault, Emilie;
Deduyer, Irène;
Claverie, Marie-Charlotte;
Bouit, Lou;
Tourasse, Nicolas J.;
Dupuy, Denis;
McCusker, Derek;
Royou, Anne

Publication type:

Article

Quantitative analysis of C. elegans transcripts by Nanopore direct-cDNA sequencing reveals terminal hairpins in non trans-spliced mRNAs.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36915-0

By:

Bernard, Florian;
Dargère, Delphine;
Rechavi, Oded;
Dupuy, Denis

Publication type:

Article

Genome-scale analysis of in vivo spatiotemporal promoter activity in Caenorhabditis elegans.

Published in:

Nature Biotechnology, 2007, v. 25, n. 6, p. 663, doi. 10.1038/nbt1305

By:

Dupuy, Denis;
Bertin, Nicolas;
Hidalgo, César A;
Venkatesan, Kavitha;
Tu, Domena;
Lee, David;
Rosenberg, Jennifer;
Svrzikapa, Nenad;
Blanc, Aurélie;
Carnec, Alain;
Carvunis, Anne-Ruxandra;
Pulak, Rock;
Shingles, Jane;
Reece-Hoyes, John;
Hunt-Newbury, Rebecca;
Viveiros, Ryan;
Mohler, William A.;
Tasan, Murat;
Roth, Frederick P.;
Le Peuch, Christian

Publication type:

Article

Reply to Toward the complete interactome.

Published in:

2006

By:

Dupuy, Denis;
Bertin, Nicolas;
Cusick, Michael E.;
Han, Jing-Dong J.;
Vidal, Marc

Publication type:

Letter

Effect of sampling on topology predictions of protein-protein interaction networks.

Published in:

Nature Biotechnology, 2005, v. 23, n. 7, p. 839, doi. 10.1038/nbt1116

By:

Han, Jing-Dong J.;
Dupuy, Denis;
Bertin, Nicolas;
Cusick, Michael E.;
Vidal, Marc

Publication type:

Article

Confirmation of Organized Modularity in the Yeast Interactome.

Published in:

2007

By:

Bertin, Nicolas;
Simonis, Nicolas;
Dupuy, Denis;
Cusick, Michael E.;
Han, Jing-Dong J.;
Fraser, Hunter B.;
Roth, Frederick P.;
Vidal, Marc

Publication type:

Letter

Genome-wide screen identifies a novel p97/ CDC-48-dependent pathway regulating ER-stress-induced gene transcription.

Published in:

EMBO Reports, 2015, v. 16, n. 3, p. 332, doi. 10.15252/embr.201439123

By:

Marza, Esther;
Taouji, Saïd;
Barroso, Kim;
Raymond, Anne‐Aurélie;
Guignard, Léo;
Bonneu, Marc;
Pallares‐Lupon, Néstor;
Dupuy, Jean‐William;
Fernandez‐Zapico, Martin E;
Rosenbaum, Jean;
Palladino, Francesca;
Dupuy, Denis;
Chevet, Eric

Publication type:

Article

Proton Microbeam Targeted Irradiation of the Gonad Primordium Region Induces Developmental Alterations Associated with Heat Shock Responses and Cuticle Defense in Caenorhabditis elegans.

Published in:

Biology (2079-7737), 2023, v. 12, n. 11, p. 1372, doi. 10.3390/biology12111372

By:

Beaudier, Pierre;
Devès, Guillaume;
Plawinski, Laurent;
Dupuy, Denis;
Barberet, Philippe;
Seznec, Hervé

Publication type:

Article

Selectable genetic markers for nematode transgenesis.

Published in:

Cellular & Molecular Life Sciences, 2011, v. 68, n. 11, p. 1917, doi. 10.1007/s00018-011-0670-1

By:

Giordano-Santini, Rosina;
Dupuy, Denis

Publication type:

Article

Quantitative analysis of dose dependent DNA fragmentation in dry pBR322 plasmid using long read sequencing and Monte Carlo simulations.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-69406-3

By:

Beaudier, Pierre;
Zein, Sara A.;
Chatzipapas, Konstantinos;
Ngoc Tran, Hoang;
Devès, Guillaume;
Plawinski, Laurent;
Liénard, Rémy;
Dupuy, Denis;
Barberet, Philippe;
Incerti, Sébastien;
Gobet, Franck;
Seznec, Hervé

Publication type:

Article

An antibiotic selection marker for nematode transgenesis.

Published in:

Nature Methods, 2010, v. 7, n. 9, p. 721, doi. 10.1038/nmeth.1494

By:

Giordano-Santini, Rosina;
Milstein, Stuart;
Svrzikapa, Nenad;
Tu, Domena;
Johnsen, Robert;
Baillie, David;
Vidal, Marc;
Dupuy, Denis

Publication type:

Article

erratum: Evidence for dynamically organized modularity in the yeast protein-protein interaction network.

Published in:

2004

By:

Han, Jing-Dong J.;
Bertin, Nicolas;
Hao, Tong;
Goldberg, Debra S.;
Berriz, Gabriel F.;
Zhang, Lan V.;
Dupuy, Denis;
Walhout, Albertha J. M.;
Cusick, Michael E.;
Roth, Frederick P.;
Vidal, Marc

Publication type:

Erratum

Evidence for dynamically organized modularity in the yeast protein-protein interaction network.

Published in:

Nature, 2004, v. 430, n. 6995, p. 88, doi. 10.1038/nature02555

By:

HN, Jing-Dong J.;
Bertin, Nicolas;
Tong Hao;
Goldberg, Debra S.;
Berriz, Gabriel F.;
Zhang, Lan V.;
Dupuy, Denis;
Walhout, Albertha J.M.;
Cusick, Michael E.;
Roth, Frederick P.;
Vidal, Marc

Publication type:

Article

Backbone-independent nucleic acid binding by splicing factor SUP-12 reveals key aspects of molecular recognition.

Published in:

Nature Communications, 2014, v. 5, n. 9, p. 4595, doi. 10.1038/ncomms5595

By:

Amrane, Samir;
Rebora, Karine;
Zniber, Ilyass;
Dupuy, Denis;
Mackereth, Cameron D

Publication type:

Article

Systematic analysis of genes required for synapse structure and function.

Published in:

Nature, 2005, v. 436, n. 7050, p. 510, doi. 10.1038/nature03809

By:

Sieburth, Derek;
QueeLim Ch'ng;
Dybbs, Michael;
Tavazoie, Masoud;
Kennedy, Scott;
Duo Wang;
Dupuy, Denis;
Rual, Jean-François;
Hill, David E.;
Vidal, Marc;
Ruvkun, Gary;
Kaplan, Joshua M.

Publication type:

Article

Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity.

Published in:

BMC Developmental Biology, 2007, v. 7, p. 1, doi. 10.1186/1471-213X-7-30

By:

Ceron, Julian;
Rual, Jean-François;
Chandra, Abha;
Dupuy, Denis;
Vidal, Marc;
van den Heuvel, Sander

Publication type:

Article