Works by Clish, Clary B.

Results: 145
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    Metabolite profiling of human renal cell carcinoma reveals tissue-origin dominance in nutrient availability.

    Published in:
    eLife, 2024, p. 1, doi. 10.7554/eLife.95652
    By:
    • Abbott, Keene L.;
    • Ali, Ahmed;
    • Reinfeld, Bradley I.;
    • Deik, Amy;
    • Subudhi, Sonu;
    • Landis, Madelyn D.;
    • Hongo, Rachel A.;
    • Young, Kirsten L.;
    • Kunchok, Tenzin;
    • Nabel, Christopher S.;
    • Crowder, Kayla D.;
    • Kent, Johnathan R.;
    • Madariaga, Maria Lucia L.;
    • Jain, Rakesh K.;
    • Beckermann, Kathryn E.;
    • Lewis, Caroline A.;
    • Clish, Clary B.;
    • Muir, Alexander;
    • Rathmell, W. Kimryn;
    • Rathmell, Jeffrey
    Publication type:
    Article
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    Association between altered tryptophan metabolism, plasma aryl hydrocarbon receptor agonists, and inflammatory Chagas disease.

    Published in:
    Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2023.1267641
    By:
    • Fernanda Ambrosio, Laura;
    • Volpini, Ximena;
    • Nahuel Quiroz, Juan;
    • Belén Brugo, María;
    • Paola Knubel, Carolina;
    • Rocío Herrera, Melisa;
    • Fozzatti, Laura;
    • Avila Pacheco, Julián;
    • Clish, Clary B.;
    • Takenaka, Maisa C.;
    • Beloscar, Juan;
    • Gustavo Theumer, Martín;
    • Javier Quintana, Francisco;
    • Rosa Perez, Ana;
    • Cristina Motrán, Claudia
    Publication type:
    Article
    8

    Platelet integrin αIIbβ3 plays a key role in a venous thrombogenesis mouse model.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52869-3
    By:
    • Adair, Brian D.;
    • Field, Conroy O.;
    • Alonso, José L.;
    • Xiong, Jian-Ping;
    • Deng, Shi-Xian;
    • Ahn, Hyun Sook;
    • Mashin, Eivgeni;
    • Clish, Clary B.;
    • van Agthoven, Johannes;
    • Yeager, Mark;
    • Guo, Youzhong;
    • Tess, David A.;
    • Landry, Donald W.;
    • Poncz, Mortimer;
    • Arnaout, M. Amin
    Publication type:
    Article
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    Integrated annotation prioritizes metabolites with bioactivity in inflammatory bowel disease.

    Published in:
    Molecular Systems Biology, 2024, v. 20, n. 4, p. 338, doi. 10.1038/s44320-024-00027-8
    By:
    • Bhosle, Amrisha;
    • Bae, Sena;
    • Zhang, Yancong;
    • Chun, Eunyoung;
    • Avila-Pacheco, Julian;
    • Geistlinger, Ludwig;
    • Pishchany, Gleb;
    • Glickman, Jonathan N;
    • Michaud, Monia;
    • Waldron, Levi;
    • Clish, Clary B;
    • Xavier, Ramnik J;
    • Vlamakis, Hera;
    • Franzosa, Eric A;
    • Garrett, Wendy S;
    • Huttenhower, Curtis
    Publication type:
    Article
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    Plasma Lipidomic Profiling and Risk of Type 2 Diabetes in the PREDIMED Trial.

    Published in:
    2018
    By:
    • Razquin, Cristina;
    • Toledo, Estefanía;
    • Clish, Clary B.;
    • Ruiz-Canela, Miguel;
    • Dennis, Courtney;
    • Corella, Dolores;
    • Papandreou, Christopher;
    • Ros, Emilio;
    • Estruch, Ramon;
    • Guasch-Ferré, Marta;
    • Gómez-Gracia, Enrique;
    • Fitó, Montserrat;
    • Yu, Edward;
    • Lapetra, José;
    • Dong Wang;
    • Romaguera, Dora;
    • Liming Liang;
    • Alonso-Gómez, Angel;
    • Deik, Amy;
    • Bullo, Mónica
    Publication type:
    journal article
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    Targeting a Braf/Mapk pathway rescues podocyte lipid peroxidation in CoQ-deficiency kidney disease.

    Published in:
    2021
    By:
    • Sidhom, Eriene-Heidi;
    • Choah Kim;
    • Kost-Alimova, Maria;
    • Theng Ting, May;
    • Keller, Keith;
    • Avila-Pacheco, Julian;
    • Watts, Andrew J. B.;
    • Vernon, Katherine A.;
    • Marshall, Jamie L.;
    • Reyes-Bricio, Estefanía;
    • Racette, Matthew;
    • Wieder, Nicolas;
    • Kleiner, Giulio;
    • Grinkevich, Elizabeth J.;
    • Fei Chen;
    • Weins, Astrid;
    • Clish, Clary B.;
    • Shaw, Jillian L.;
    • Quinzii, Catarina M.;
    • Greka, Anna
    Publication type:
    journal article
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    Dimethylguanidino valeric acid is a marker of liver fat and predicts diabetes.

    Published in:
    2017
    By:
    • Baohui Zheng;
    • Peterson, Randall T.;
    • O'Sullivan, John F.;
    • O'Connor, Sean;
    • Cohen, Paul;
    • Long, Michelle T.;
    • Wang, Thomas J.;
    • Corey, Kathleen E.;
    • Morningstar, Jordan E.;
    • Gerszten, Robert E.;
    • Fox, Caroline;
    • Vasan, Ramachandran S.;
    • Qiong Yang;
    • Yan Gao;
    • Wilson, James G.;
    • Jeanfavre, Sarah;
    • Scott, Justin;
    • Clish, Clary B.;
    • Fernandez, Celine;
    • Melander, Olle
    Publication type:
    journal article
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    Branched-Chain Amino Acids and Risk of Breast Cancer.

    Published in:
    JNCI Cancer Spectrum, 2021, v. 5, n. 5, p. 1, doi. 10.1093/jncics/pkab059
    By:
    • Zeleznik, Oana A;
    • Balasubramanian, Raji;
    • Ren, Yumeng;
    • Tobias, Deirdre K;
    • Rosner, Bernard A;
    • Peng, Cheng;
    • Bever, Alaina M;
    • Frueh, Lisa;
    • Jeanfavre, Sarah;
    • Avila-Pacheco, Julian;
    • Clish, Clary B;
    • Mora, Samia;
    • Hu, Frank B;
    • Eliassen, A Heather
    Publication type:
    Article
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    Machine learning‐based clustering identifies obesity subgroups with differential multi‐omics profiles and metabolic patterns.

    Published in:
    Obesity (19307381), 2024, v. 32, n. 11, p. 2024, doi. 10.1002/oby.24137
    By:
    • Anwar, Mohammad Y.;
    • Highland, Heather;
    • Buchanan, Victoria Lynn;
    • Graff, Mariaelisa;
    • Young, Kristin;
    • Taylor, Kent D.;
    • Tracy, Russell P.;
    • Durda, Peter;
    • Liu, Yongmei;
    • Johnson, Craig W.;
    • Aguet, Francois;
    • Ardlie, Kristin G.;
    • Gerszten, Robert E.;
    • Clish, Clary B.;
    • Lange, Leslie A.;
    • Ding, Jingzhong;
    • Goodarzi, Mark O.;
    • Chen, Yii‐Der Ida;
    • Peloso, Gina M.;
    • Guo, Xiuqing
    Publication type:
    Article
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    Plasma Metabolites From Choline Pathway and Risk of Cardiovascular Disease in the PREDIMED (Prevention With Mediterranean Diet) Study.

    Published in:
    2017
    By:
    • Guasch‐Ferré, Marta;
    • Hu, Frank B.;
    • Ruiz‐Canela, Miguel;
    • Bulló, Mònica;
    • Toledo, Estefanía;
    • Wang, Dong D.;
    • Corella, Dolores;
    • Gómez‐Gracia, Enrique;
    • Fiol, Miquel;
    • Estruch, Ramon;
    • Lapetra, José;
    • Fitó, Montserrat;
    • Arós, Fernando;
    • Serra‐Majem, Lluís;
    • Ros, Emilio;
    • Dennis, Courtney;
    • Liang, Liming;
    • Clish, Clary B.;
    • Martínez‐González, Miguel A.;
    • Salas‐Salvadó, Jordi
    Publication type:
    journal article
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    Metabolites of Glutamate Metabolism Are Associated With Incident Cardiovascular Events in the PREDIMED PREvención con DIeta MEDiterránea (PREDIMED) Trial.

    Published in:
    2016
    By:
    • Zheng, Yan;
    • Hu, Frank B.;
    • Ruiz‐Canela, Miguel;
    • Clish, Clary B.;
    • Dennis, Courtney;
    • Salas‐Salvado, Jordi;
    • Hruby, Adela;
    • Liang, Liming;
    • Toledo, Estefania;
    • Corella, Dolores;
    • Ros, Emilio;
    • Fitó, Montserrat;
    • Gómez‐Gracia, Enrique;
    • Arós, Fernando;
    • Fiol, Miquel;
    • Lapetra, José;
    • Serra‐Majem, Lluis;
    • Estruch, Ramón;
    • Martínez‐González, Miguel A.
    Publication type:
    journal article
    31

    Dietary Inflammatory and Insulinemic Potentials, Plasma Metabolome and Risk of Colorectal Cancer.

    Published in:
    Metabolites (2218-1989), 2023, v. 13, n. 6, p. 744, doi. 10.3390/metabo13060744
    By:
    • Lee, Dong Hoon;
    • Jin, Qi;
    • Shi, Ni;
    • Wang, Fenglei;
    • Bever, Alaina M.;
    • Li, Jun;
    • Liang, Liming;
    • Hu, Frank B.;
    • Song, Mingyang;
    • Zeleznik, Oana A.;
    • Zhang, Xuehong;
    • Joshi, Amit;
    • Wu, Kana;
    • Jeon, Justin Y.;
    • Meyerhardt, Jeffrey A.;
    • Chan, Andrew T.;
    • Eliassen, A. Heather;
    • Clish, Clary B.;
    • Clinton, Steven K.;
    • Giovannucci, Edward L.
    Publication type:
    Article
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    Glycolysis Metabolites and Risk of Atrial Fibrillation and Heart Failure in the PREDIMED Trial.

    Published in:
    Metabolites (2218-1989), 2021, v. 11, n. 5, p. 306, doi. 10.3390/metabo11050306
    By:
    • Becerra-Tomás, Nerea;
    • Ruiz-Canela, Miguel;
    • Hernández-Alonso, Pablo;
    • Bulló, Mònica;
    • Li, Jun;
    • Guasch-Ferré, Marta;
    • Toledo, Estefanía;
    • Clish, Clary B.;
    • Estruch, Ramon;
    • Ros, Emilio;
    • Fitó, Montserrat;
    • Lee, Chih-Hao;
    • Pierce, Kerry;
    • Arós, Fernando;
    • Serra-Majem, Lluís;
    • Liang, Liming;
    • Razquin, Cristina;
    • Gómez-Gracia, Enrique;
    • Martínez-González, Miguel A.;
    • Hu, Frank B.
    Publication type:
    Article
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    Identifying Metabolomic Profiles of Insulinemic Dietary Patterns.

    Published in:
    Metabolites (2218-1989), 2019, v. 9, n. 6, p. 120, doi. 10.3390/metabo9060120
    By:
    • Tabung, Fred K.;
    • Balasubramanian, Raji;
    • Liang, Liming;
    • Clinton, Steven K.;
    • Cespedes Feliciano, Elizabeth M.;
    • Manson, JoAnn E.;
    • Van Horn, Linda;
    • Wactawski-Wende, Jean;
    • Clish, Clary B.;
    • Giovannucci, Edward L.;
    • Rexrode, Kathryn M.
    Publication type:
    Article
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    Circulating Amino Acids and Risk of Peripheral Artery Disease in the PREDIMED Trial.

    Published in:
    International Journal of Molecular Sciences, 2023, v. 24, n. 1, p. 270, doi. 10.3390/ijms24010270
    By:
    • Razquin, Cristina;
    • Ruiz-Canela, Miguel;
    • Toledo, Estefania;
    • Clish, Clary B.;
    • Guasch-Ferré, Marta;
    • García-Gavilán, Jesús F.;
    • Wittenbecher, Clemens;
    • Alonso-Gómez, Angel;
    • Fitó, Montse;
    • Liang, Liming;
    • Corella, Dolores;
    • Gómez-Gracia, Enrique;
    • Estruch, Ramon;
    • Fiol, Miquel;
    • Santos-Lozano, Jose M.;
    • Serra-Majem, Luis;
    • Ros, Emilio;
    • Aros, Fernando;
    • Salas-Salvadó, Jordi;
    • Hu, Frank B.
    Publication type:
    Article
    42

    Comparison of Proteomic Assessment Methods in Multiple Cohort Studies.

    Published in:
    Proteomics, 2020, v. 20, n. 12, p. 1, doi. 10.1002/pmic.201900278
    By:
    • Raffield, Laura M.;
    • Dang, Hong;
    • Pratte, Katherine A.;
    • Jacobson, Sean;
    • Gillenwater, Lucas A.;
    • Ampleford, Elizabeth;
    • Barjaktarevic, Igor;
    • Basta, Patricia;
    • Clish, Clary B.;
    • Comellas, Alejandro P.;
    • Cornell, Elaine;
    • Curtis, Jeffrey L.;
    • Doerschuk, Claire;
    • Durda, Peter;
    • Emson, Claire;
    • Freeman, Christine M.;
    • Guo, Xiuqing;
    • Hastie, Annette T.;
    • Hawkins, Gregory A.;
    • Herrera, Julio
    Publication type:
    Article
    43

    Lymphocyte activation gene-3-associated protein networks are associated with HDL-cholesterol and mortality in the Trans-omics for Precision Medicine program.

    Published in:
    Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03304-0
    By:
    • Manichaikul, Ani;
    • Lin, Honghuang;
    • Kang, Chansuk;
    • Yang, Chaojie;
    • Rich, Stephen S.;
    • Taylor, Kent D.;
    • Guo, Xiuqing;
    • Rotter, Jerome I.;
    • Craig Johnson, W.;
    • Cornell, Elaine;
    • Tracy, Russell P.;
    • Peter Durda, J.;
    • Liu, Yongmei;
    • Vasan, Ramachandran S.;
    • Adrienne Cupples, L.;
    • Gerszten, Robert E.;
    • Clish, Clary B.;
    • Jain, Deepti;
    • Conomos, Matthew P.;
    • Blackwell, Thomas
    Publication type:
    Article
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    Lipid metabolic networks, Mediterranean diet and cardiovascular disease in the PREDIMED trial.

    Published in:
    2018
    By:
    • Wang, Dong D;
    • Zheng, Yan;
    • Toledo, Estefanía;
    • Razquin, Cristina;
    • Ruiz-Canela, Miguel;
    • Guasch-Ferré, Marta;
    • Yu, Edward;
    • Corella, Dolores;
    • Gómez-Gracia, Enrique;
    • Fiol, Miquel;
    • Estruch, Ramón;
    • Ros, Emilio;
    • Lapetra, José;
    • Fito, Montserrat;
    • Aros, Fernando;
    • Serra-Majem, Lluis;
    • Clish, Clary B;
    • Salas-Salvadó, Jordi;
    • Liang, Liming;
    • Martínez-González, Miguel A
    Publication type:
    journal article
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    A role for bacterial urease in gut dysbiosis and Crohn's disease.

    Published in:
    Science Translational Medicine, 2017, v. 9, n. 416, p. 1, doi. 10.1126/scitranslmed.aah6888
    By:
    • Ni, Josephine;
    • David Shen, Ting-Chin;
    • Chen, Eric Z.;
    • Bittinger, Kyle;
    • Bailey, Aubrey;
    • Roggiani, Manuela;
    • Sirota-Madi, Alexandra;
    • Friedman, Elliot S.;
    • Chau, Lillian;
    • Lin, Andrew;
    • Nissim, Ilana;
    • Scott, Justin;
    • Lauder, Abigail;
    • Hoffmann, Christopher;
    • Rivas, Gloriany;
    • Albenberg, Lindsey;
    • Baldassano, Robert N.;
    • Braun, Jonathan;
    • Xavier, Ramnik J.;
    • Clish, Clary B.
    Publication type:
    Article
    49

    The cytoplasmic prolyl-tRNA synthetase of the malaria parasite is a dual-stage target of febrifugine and its analogs.

    Published in:
    Science Translational Medicine, 2015, v. 7, n. 288, p. 1, doi. 10.1126/scitranslmed.aaa3575
    By:
    • Herman, Jonathan D.;
    • Pepper, Lauren R.;
    • Cortese, Joseph F.;
    • Estiu, Guillermina;
    • Galinsky, Kevin;
    • Zuzarte-Luis, Vanessa;
    • Derbyshire, Emily R.;
    • Ribacke, Ulf;
    • Lukens, Amanda K.;
    • Santos, Sofia A.;
    • Patel, Vishal;
    • Clish, Clary B.;
    • Sullivan Jr., William J.;
    • Huihao Zhou;
    • Bopp, Selina E.;
    • Schimmel, Paul;
    • Lindquist, Susan;
    • Clardy, Jon;
    • Mota, Maria M.;
    • Keller, Tracy L.
    Publication type:
    Article
    50

    Metabolic and inflammatory perturbation of diabetes associated gut dysbiosis in people living with and without HIV infection.

    Published in:
    Genome Medicine, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13073-024-01336-1
    By:
    • Luo, Kai;
    • Peters, Brandilyn A.;
    • Moon, Jee-Young;
    • Xue, Xiaonan;
    • Wang, Zheng;
    • Usyk, Mykhaylo;
    • Hanna, David B.;
    • Landay, Alan L.;
    • Schneider, Michael F.;
    • Gustafson, Deborah;
    • Weber, Kathleen M.;
    • French, Audrey;
    • Sharma, Anjali;
    • Anastos, Kathryn;
    • Wang, Tao;
    • Brown, Todd;
    • Clish, Clary B.;
    • Kaplan, Robert C.;
    • Knight, Rob;
    • Burk, Robert D.
    Publication type:
    Article