Works matching Molecular structure of enzymes

Results: 450

Microbial Exo-xylanases: A Mini Review.

Published in:

Applied Biochemistry & Biotechnology, 2014, v. 174, n. 1, p. 81, doi. 10.1007/s12010-014-1042-8

By:

Juturu, Veeresh;
Wu, Jin

Publication type:

Article

Gene Expression and Characterization of a Third Type of Dye-Linked L-Proline Dehydrogenase from the Aerobic Hyperthermophilic Archaeon, Aeropyrum pernix.

Published in:

Bioscience, Biotechnology & Biochemistry, 2012, v. 76, n. 3, p. 589, doi. 10.1271/bbb.110775

By:

Satomura, Takenori;
Hara, Yusuke;
Suye, Shin-Ichiro;
Sakuraba, Haruhiko;
Ohshima, Toshihisa

Publication type:

Article

The Role of Oxidative Stress in Diabetic Neuropathy: Generation of Free Radical Species in the Glycation Reaction and Gene Polymorphisms Encoding Antioxidant Enzymes to Genetic Susceptibility to Diabetic Neuropathy in Population of Type I Diabetic Patients

Published in:

Cell Biochemistry & Biophysics, 2015, v. 71, n. 3, p. 1425, doi. 10.1007/s12013-014-0365-y

By:

Babizhayev, Mark;
Strokov, Igor;
Nosikov, Valery;
Savel'yeva, Ekaterina;
Sitnikov, Vladimir;
Yegor E. Yegorov;
Lankin, Vadim

Publication type:

Article

Plant Xyloglucan Xyloglucosyl Transferases and the Cell Wall Structure: Subtle but Significant.

Published in:

Molecules, 2020, v. 25, n. 23, p. 5619, doi. 10.3390/molecules25235619

By:

Stratilová, Barbora;
Kozmon, Stanislav;
Stratilová, Eva;
Hrmova, Maria;
Somsák, László

Publication type:

Article

Structural Dynamics of DPP-4 and Its Influence on the Projection of Bioactive Ligands.

Published in:

Molecules, 2018, v. 23, n. 2, p. 490, doi. 10.3390/molecules23020490

By:

Pantaleão, Simone Queiroz;
Philot, Eric Allison;
de Resende-Lara, Pedro Túlio;
Lima, Angélica Nakagawa;
Perahia, David;
Miteva, Maria Atanassova;
Scott, Ana Ligia;
Honorio, Kathia Maria

Publication type:

Article

Activity, Stability, and Structure of Native and Modified by Woodward Reagent K Mushroom Tyrosinase.

Published in:

Journal of Applied Spectroscopy, 2018, v. 84, n. 6, p. 1044, doi. 10.1007/s10812-018-0584-x

By:

Emami, S.;
Piri, H.;
Gheibi, N.

Publication type:

Article

An R-Selective Hydroxynitrile Lyase from Arabidopsis thaliana with an α/β-Hydrolase Fold.

Published in:

Asian Journal of Control, 2013, v. 15, n. 6, p. 8679, doi. 10.1002/anie.200701455

By:

Andexer, Jennifer;
von Langermann, Jan;
Mell, Annett;
Bocola, Marco;
Kragl, Udo;
Eggert, Thorsten;
Pohl, Martina

Publication type:

Article

Modifications to glucose-6-phosphate dehydrogenase for industrial applications: predictions and tests.

Published in:

Journal of Cheminformatics, 2013, v. 5, n. S1, p. 1, doi. 10.1186/1758-2946-5-S1-O19

By:

Mosisch, Martin;
Simons, Jan;
Hilterhaus, Lutz;
Torda, Andrew

Publication type:

Article

Identification, structure-activity relationship and in silico molecular docking analyses of five novel angiotensin I-converting enzyme (ACE)-inhibitory peptides from stone fish (Actinopyga lecanora) hydrolysates.

Published in:

PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0197644

By:

Auwal, Shehu Muhammad;
Zainal Abidin, Najib;
Zarei, Mohammad;
Tan, Chin Ping;
Saari, Nazamid

Publication type:

Article

A new benchmark illustrates that integration of geometric constraints inferred from enzyme reaction chemistry can increase enzyme active site modeling accuracy.

Published in:

PLoS ONE, 2019, v. 14, n. 4, p. 1, doi. 10.1371/journal.pone.0214126

By:

Bertolani, Steve J.;
Siegel, Justin B.

Publication type:

Article

Structural classification and properties of ketoacyl reductases, hydroxyacyl dehydratases and enoyl reductases.

Published in:

PEDS: Protein Engineering, Design & Selection, 2012, v. 25, n. 12, p. 803, doi. 10.1093/protein/gzs050

By:

Cantu, David C.;
Dai, Tingsong;
Beversdorf, Zachary S.;
Reilly, Peter J.

Publication type:

Article

Extraction, characterization and molecular structure of bovine skin gelatin extracted with plant enzymes bromelain and zingibain.

Published in:

Journal of Food Science & Technology, 2020, v. 57, n. 10, p. 3772, doi. 10.1007/s13197-020-04409-2

By:

Ahmad, Tanbir;
Ismail, Amin;
Ahmad, Siti Aqlima;
Khalil, Khalilah Abdul;
Kee, Leo Teik;
Awad, Elmutaz Atta;
Sazili, Awis Qurni

Publication type:

Article

Elucidation of morphological characteristics, crystallinity, and molecular structures of native and enzyme modified cereal brans.

Published in:

Journal of Food Biochemistry, 2021, v. 45, n. 7, p. 1, doi. 10.1111/jfbc.13768

By:

Pasha, Imran;
Ahmad, Farah;
Usman, Muhammad

Publication type:

Article

The aerobic CO dehydrogenase from Oligotropha carboxidovorans.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2015, v. 20, n. 2, p. 243, doi. 10.1007/s00775-014-1188-4

By:

Hille, Russ;
Dingwall, Stephanie;
Wilcoxen, Jarett

Publication type:

Article

Theoretical studies on mechanisms of some Mo enzymes.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2015, v. 20, n. 2, p. 323, doi. 10.1007/s00775-015-1237-7

By:

Cerqueira, Nuno;
Pakhira, Bholanath;
Sarkar, Sabyasachi

Publication type:

Article

Rational design of esterase BioH with enhanced enantioselectivity towards methyl ( S)- o-chloromandelate.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 4, p. 1709, doi. 10.1007/s00253-014-5995-x

By:

Gu, Jiali;
Ye, Lidan;
Guo, Fei;
Lv, Xiaomei;
Lu, Wenqiang;
Yu, Hongwei

Publication type:

Article

pH-induced conformational changes in human ABO(H) blood group glycosyltransferases confirm the importance of electrostatic interactions in the formation of the semi-closed state *.

Published in:

Glycobiology, 2014, v. 24, n. 3, p. 237, doi. 10.1093/glycob/cwt098

By:

Johal, Asha R;
Blackler, Ryan J;
Alfaro, Javier A;
Schuman, Brock;
Borisova, Svetlana;
Evans, Stephen V

Publication type:

Article

Post-Proline Cleaving Enzymes (PPCEs): Classification, Structure, Molecular Properties, and Applications.

Published in:

Plants (2223-7747), 2022, v. 11, n. 10, p. 1330, doi. 10.3390/plants11101330

By:

Baharin, Anis;
Ting, Tiew-Yik;
Goh, Hoe-Han

Publication type:

Article

Enzyme encapsulation in magnetic chitosan-Fe<sub>3</sub>O<sub>4</sub> microparticles.

Published in:

Journal of Microencapsulation, 2015, v. 32, n. 1, p. 16, doi. 10.3109/02652048.2014.940013

By:

Costa-Silva, Tales Alexandre;
Marques, Polyana Samorano;
Souza, Cláudia Regina Fernandes;
Said, Suraia;
Oliveira, Wanderley Pereira

Publication type:

Article

Transmission of the effect of Mercurius corrosivus 30 CH on α-amylase in cell free medium through water.

Published in:

International Journal of High Dilution Resarch, 2014, v. 13, n. 47, p. 117

By:

Sarkar, Tandra;
Konar, Atheni;
Chakraborty, Indrani;
Sukul, Nirmal Chandra;
Sukul, Anirban;
Chakravarty, Rathin

Publication type:

Article

Structural and biochemical analysis of a thermostable membrane-bound stomatin-specific protease.

Published in:

Journal of Synchrotron Radiation, 2013, v. 20, n. 6, p. 933, doi. 10.1107/S0909049513021328

By:

Yokoyama, Hideshi;
Kobayashi, Daisuke;
Takizawa, Naoto;
Fujii, Satoshi;
Matsui, Ikuo

Publication type:

Article

X-ray structure determination and deuteration of nattokinase.

Published in:

Journal of Synchrotron Radiation, 2013, v. 20, n. 6, p. 875, doi. 10.1107/S0909049513020700

By:

Yanagisawa, Yasuhide;
Chatake, Toshiyuki;
Naito, Sawa;
Ohsugi, Tadanori;
Yatagai, Chieko;
Sumi, Hiroyuki;
Kawaguchi, Akio;
Chiba-Kamosida, Kaori;
Ogawa, Megumi;
Adachi, Tatsumi;
Morimoto, Yukio

Publication type:

Article

Structural basis of L-glucose oxidation by scyllo-inositol dehydrogenase: Implications for a novel enzyme subfamily classification.

Published in:

PLoS ONE, 2018, v. 13, n. 5, p. 1, doi. 10.1371/journal.pone.0198010

By:

Fukano, Kazuhiro;
Ozawa, Kunio;
Kokubu, Masaya;
Shimizu, Tetsu;
Ito, Shinsaku;
Sasaki, Yasuyuki;
Nakamura, Akira;
Yajima, Shunsuke

Publication type:

Article

Probing the Structural and Conformational Stability of the Wb-iPGM Enzyme and Role of Mn Ions in Their Catalytic Site.

Published in:

International Journal of Peptide Research & Therapeutics, 2015, v. 21, n. 4, p. 393, doi. 10.1007/s10989-015-9464-x

By:

Sharma, Om;
Hari Krishna, Kapa;
Suresh Kumar, Muthuvel

Publication type:

Article

Molecular Structure, Localization, and Possible Functions of the Myelin-Associated Enzyme 2′,3′-Cyclic Nucleotide 3′-Phosphodiesterase.

Published in:

Journal of Neurochemistry, 1988, v. 50, n. 6, p. 1667, doi. 10.1111/j.1471-4159.1988.tb02461.x

By:

Vogel, U. S.;
Thompson, R. J.

Publication type:

Article

Genome-wide analysis of purple acid phosphatase structure and expression in ten vegetable species.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5022-1

By:

Xie, Lulu;
Shang, Qingmao

Publication type:

Article

Structure and substrate fingerprint of aminopeptidase P from Plasmodium falciparum.

Published in:

Biochemical Journal, 2016, v. 473, n. 19, p. 3189, doi. 10.1042/BCJ20160550

By:

Drinkwater, Nyssa;
Sivaraman, Komagal Kannan;
Bamert, Rebecca S.;
Rut, Wioletta;
Mohamed, Khadija;
Vinh, Natalie B.;
Scammells, Peter J.;
Drag, Marcin;
McGowan, Sheena

Publication type:

Article

The mechanistic study of Leishmania major dihydro-orotate dehydrogenase based on steady- and pre-steady-state kinetic analysis.

Published in:

Biochemical Journal, 2016, v. 473, n. 5, p. 651, doi. 10.1042/BJ20150921

By:

Reis, Renata A. G.;
Ferreira, Patricia;
Medina, Milagros;
Nonato, M. Cristina

Publication type:

Article

Pseudoproteases: mechanisms and function.

Published in:

Biochemical Journal, 2015, v. 468, n. 1, p. 17, doi. 10.1042/BJ20141506

By:

Reynolds, Simone L.;
Fischer, Katja

Publication type:

Article

Solution structures of the Bacillus cereus metallo-β-lactamase BcII and its complex with the broad spectrum inhibitor R-thiomandelic acid.

Published in:

Biochemical Journal, 2013, v. 456, n. 3, p. 397, doi. 10.1042/BJ20131003

By:

KARSISIOTIS, Andreas Ioannis;
DAMBLON, Christian F.;
ROBERTS, Gordon C. K.

Publication type:

Article

Structure-function relationships in calpains.

Published in:

Biochemical Journal, 2012, v. 447, n. 3, p. 335, doi. 10.1042/BJ20120921

By:

CAMPBELL, Robert L.;
DAVIES, Peter L.

Publication type:

Article

Thermostabilization of Bacillus subtilis lipase A by minimizing the structural deformation caused by packing enhancement.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2013, v. 40, n. 11, p. 1223, doi. 10.1007/s10295-013-1330-2

By:

Yun, Hong;
Park, Hyun;
Joo, Jeong;
Yoo, Young

Publication type:

Article

On DNA Motions under Action of Enzymes of Different Types. II.

Published in:

Crystallography Reports, 2019, v. 64, n. 1, p. 80, doi. 10.1134/S106377451901019X

By:

Pikin, S. A.;
Pikina, E. S.

Publication type:

Article

In silico analysis of heme oxygenase structural homologues identifies group-specific conservations.

Published in:

FEBS Open Bio, 2017, v. 7, n. 10, p. 1480, doi. 10.1002/2211-5463.12275

By:

Irvin, Joseph;
Ropelewski, Alexander J.;
Perozich, John

Publication type:

Article

Diffuse binding of Zn2+ to the denatured ensemble of Cu/Zn superoxide dismutase 1.

Published in:

FEBS Open Bio, 2015, v. 5, p. 56, doi. 10.1016/j.fob.2014.12.003

By:

Szpryngiel, Scarlett;
Oliveberg, Mikael;
Mäler, Lena

Publication type:

Article

Structure-based identification of functional residues in the nucleoside-2′-O-methylase domain of Bluetongue virus VP4 capping enzyme.

Published in:

FEBS Open Bio, 2015, v. 5, p. 138, doi. 10.1016/j.fob.2015.02.001

By:

Stewart, Meredith E.;
Roy, Polly

Publication type:

Article

Structure of l‐rhamnose isomerase in complex with l‐rhamnopyranose demonstrates the sugar‐ring opening mechanism and the role of a substrate sub‐binding site.

Published in:

FEBS Open Bio, 2013, v. 3, n. 1, p. 35, doi. 10.1016/j.fob.2012.11.008

By:

Yoshida, Hiromi;
Yoshihara, Akihide;
Teraoka, Misa;
Yamashita, Satoshi;
Izumori, Ken;
Kamitori, Shigehiro

Publication type:

Article

Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium spp. Reveal the Molecular Basis for Their Recognition of 'Bulky-Bulky' Ketones.

Published in:

Topics in Catalysis, 2014, v. 57, n. 5, p. 356, doi. 10.1007/s11244-013-0191-2

By:

Man, Henry;
Kędziora, Kinga;
Kulig, Justyna;
Frank, Annika;
Lavandera, Iván;
Gotor-Fernández, Vicente;
Rother, Dörte;
Hart, Sam;
Turkenburg, Johan;
Grogan, Gideon

Publication type:

Article

Structure of NADH-Dependent Carbonyl Reductase (CPCR2) from Candida parapsilosis Provides Insight into Mutations that Improve Catalytic Properties.

Published in:

ChemCatChem, 2014, v. 6, n. 4, p. 1103, doi. 10.1002/cctc.201300788

By:

Man, Henry;
Loderer, Christoph;
Ansorge‐Schumacher, Marion B.;
Grogan, Gideon

Publication type:

Article

Specialization versus conservation: How Pol I and Pol III use the conserved architecture of the pre-initiation complex for specialized transcription.

Published in:

Transcription (2154-1264), 2016, v. 7, n. 4, p. 127, doi. 10.1080/21541264.2016.1203628

By:

Hoffmann, Niklas A.;
Sadian, Yashar;
Tafur, Lucas;
Kosinski, Jan;
Müller, Christoph W.

Publication type:

Article

Zinc'ing down RNA Polymerase I.

Published in:

Transcription (2154-1264), 2013, v. 4, n. 5, p. 1, doi. 10.4161/trns.26594

By:

Chanfreau, Guillaume F.

Publication type:

Article

Benzimidazolium Salts Containing Trifluoromethoxybenzyl: Synthesis, Characterization, Crystal Structure, Molecular Docking Studies and Enzymes Inhibitory Properties.

Published in:

Chemistry & Biodiversity, 2022, v. 19, n. 12, p. 1, doi. 10.1002/cbdv.202200257

By:

Hamide, Mahmut;
Gök, Yetkin;
Demir, Yeliz;
Sevinçek, Resul;
Taskin‐Tok, Tugba;
Tezcan, Burcu;
Aktaş, Aydın;
Gülçin, İlhami;
Aygün, Muhittin;
Güzel, Bilgehan

Publication type:

Article

New Clues to Sleeping Sickness.

Published in:: JAMA: Journal of the American Medical Association, 2013, v. 309, n. 1, p. 20, doi. 10.1001/jama.2012.131057
Publication type:: Article

Influence of Subunit Interface Mutations on Kinetic and Dynamic Properties of Alkaline Phosphatase from E. coli.

Published in:

Croatica Chemica Acta, 2013, v. 86, n. 2, p. 165, doi. 10.5562/cca2168

By:

Šprung, Matilda;
Bučević-Popović, Viljemka;
Soldo, Barbara;
Pavela-Vrančić, Maja;
Orhanović, Stjepan

Publication type:

Article

Discovery of a nanomolar inhibitor of the human glyoxalase-I enzyme using structure-based poly-pharmacophore modelling and molecular docking.

Published in:

Journal of Computer-Aided Molecular Design, 2019, v. 33, n. 9, p. 799, doi. 10.1007/s10822-019-00226-8

By:

Al-Shar'i, Nizar A.;
Al-Balas, Qosay A.;
Al-Waqfi, Rand A.;
Hassan, Mohammad A.;
Alkhalifa, Amer E.;
Ayoub, Nehad M.

Publication type:

Article

Effects of point mutations on the thermostability of B. subtilis lipase: investigating nonadditivity.

Published in:

Journal of Computer-Aided Molecular Design, 2016, v. 30, n. 10, p. 899, doi. 10.1007/s10822-016-9978-0

By:

Singh, Bipin;
Bulusu, Gopalakrishnan;
Mitra, Abhijit

Publication type:

Article

The Interaction of Beta-Lactam Compounds with Chromosomally Mediated Enzymes: Relations to the Molecular Structure.

Published in:

Chemotherapy (0009-3157), 1985, v. 31, n. 4, p. 272, doi. 10.1159/000238347

By:

Cullmann, Wolfgang

Publication type:

Article

A Comprehensive Analysis of Human CYP3A4 Crystal Structures as a Potential Tool for Molecular Docking-Based Site of Metabolism and Enzyme Inhibition Studies.

Published in:

Journal of Computational Biophysics & Chemistry, 2022, v. 21, n. 3, p. 259, doi. 10.1142/S2737416522300012

By:

Ridhwan, Mohamad Jemain Mohamad;
Bakar, Syahrul Imran Abu;
Latip, Normala Abd;
Ghani, Nurunajah Ab;
Ismail, Nor Hadiani

Publication type:

Article

Artificial multi-enzyme cascades and whole-cell transformation for bioconversion of C1 compounds: Advances, challenge and perspectives.

Published in:

Synthetic & Systems Biotechnology, 2023, v. 8, n. 4, p. 578, doi. 10.1016/j.synbio.2023.08.008

By:

Yangyi Qiao;
Wenyue Ma;
Shangjie Zhang;
Feng Guo;
Kang Liu;
Yujia Jiang;
Yanxia Wang;
Fengxue Xin;
Wenming Zhang;
Min Jiang

Publication type:

Article

Purification and X-ray crystallographic analysis of 7-keto-8-aminopelargonic acid (KAPA) synthase from Mycobacterium smegmatis.

Published in:

Acta Crystallographica: Section F, Structural Biology Communications, 2014, v. 70, n. 10, p. 1372, doi. 10.1107/S2053230X14018317

By:

Fan, Shanghua;
Li, Defeng;
Fleming, Joy;
Hong, Yuan;
Chen, Tao;
Zhou, Lin;
Bi, Lijun;
Wang, Dacheng;
Zhang, Xianen;
Chen, Guanjun

Publication type:

Article