Works matching Molecular structure of enzymes

Results: 441

Microbial Exo-xylanases: A Mini Review.

Published in:

Applied Biochemistry & Biotechnology, 2014, v. 174, n. 1, p. 81, doi. 10.1007/s12010-014-1042-8

By:

Juturu, Veeresh;
Wu, Jin

Publication type:

Article

Gene Expression and Characterization of a Third Type of Dye-Linked L-Proline Dehydrogenase from the Aerobic Hyperthermophilic Archaeon, Aeropyrum pernix.

Published in:

Bioscience, Biotechnology & Biochemistry, 2012, v. 76, n. 3, p. 589, doi. 10.1271/bbb.110775

By:

Satomura, Takenori;
Hara, Yusuke;
Suye, Shin-Ichiro;
Sakuraba, Haruhiko;
Ohshima, Toshihisa

Publication type:

Article

Innovative Pivaloyl Fixed 1,3‐Thiazole‐2‐imines as Multitarget Inhibitors: Synthesis, Enzyme Inhibition, Molecular Docking and Structure Activity Relationship (SAR) Studies.

Published in:

ChemistrySelect, 2025, v. 10, n. 15, p. 1, doi. 10.1002/slct.202501366

By:

Ahmed, Atteeque;
Manan, Abdul;
Saeed, Aamer;
Ismail, Hammad;
Babar, Anees;
Shabir, Ghulam;
Farag, Basant;
El‐Seedi, Hesham R

Publication type:

Article

Discovery of a nanomolar inhibitor of the human glyoxalase-I enzyme using structure-based poly-pharmacophore modelling and molecular docking.

Published in:

Journal of Computer-Aided Molecular Design, 2019, v. 33, n. 9, p. 799, doi. 10.1007/s10822-019-00226-8

By:

Al-Shar'i, Nizar A.;
Al-Balas, Qosay A.;
Al-Waqfi, Rand A.;
Hassan, Mohammad A.;
Alkhalifa, Amer E.;
Ayoub, Nehad M.

Publication type:

Article

Effects of point mutations on the thermostability of B. subtilis lipase: investigating nonadditivity.

Published in:

Journal of Computer-Aided Molecular Design, 2016, v. 30, n. 10, p. 899, doi. 10.1007/s10822-016-9978-0

By:

Singh, Bipin;
Bulusu, Gopalakrishnan;
Mitra, Abhijit

Publication type:

Article

Novel Aspects of Polynucleotide Phosphorylase Function in Streptomyces.

Published in:

Antibiotics (2079-6382), 2018, v. 7, n. 1, p. 25, doi. 10.3390/antibiotics7010025

By:

Jones, George H.

Publication type:

Article

Chondroitin Sulfate-Degrading Enzymes as Tools for the Development of New Pharmaceuticals.

Published in:

Catalysts (2073-4344), 2019, v. 9, n. 4, p. 322, doi. 10.3390/catal9040322

By:

Benito-Arenas, Raúl;
Zárate, Sandra G.;
Revuelta, Julia;
Bastida, Agatha

Publication type:

Article

Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium spp. Reveal the Molecular Basis for Their Recognition of 'Bulky-Bulky' Ketones.

Published in:

Topics in Catalysis, 2014, v. 57, n. 5, p. 356, doi. 10.1007/s11244-013-0191-2

By:

Man, Henry;
Kędziora, Kinga;
Kulig, Justyna;
Frank, Annika;
Lavandera, Iván;
Gotor-Fernández, Vicente;
Rother, Dörte;
Hart, Sam;
Turkenburg, Johan;
Grogan, Gideon

Publication type:

Article

MOLECULAR DYNAMICS SIMULATIONS PROVIDE INSIGHTS INTO STRUCTURE AND FUNCTION OF AMADORIASE ENZYMES.

Published in:

Naukovi visti NTUU - KPI, 2017, v. 112, n. 2, p. 45, doi. 10.20535/1810-0546.2017.2.98306

By:

Rigoldi, F.;
Spero, L.;
Vedove, A. D.;
Redaelli, A.;
Parisini, E.;
Gautieri, A.

Publication type:

Article

Molecular Structure of Paraoxonase-1 and Its Modifications in Relation to Enzyme Activity and Biological Functions—A Comprehensive Review.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 23, p. 13129, doi. 10.3390/ijms252313129

By:

Lewoń-Mrozek, Dominika;
Kurzynoga, Julia;
Jędrzejewski, Piotr;
Kędzierska, Karolina;
Partyka, Alicja;
Kuriata-Kordek, Magdalena;
Ściskalska, Milena

Publication type:

Article

Molecular Cloning and 3D Structure Modeling of APEX1, DNA Base Excision Repair Enzyme from the Camel, Camelus dromedarius.

Published in:

International Journal of Molecular Sciences, 2012, v. 13, n. 7, p. 8578, doi. 10.3390/ijms13078578

By:

Ataya, Farid Shokry;
Fouad, Dalia;
Malik, Ajamaluddin;
Saeed, Hesham Mahmoud

Publication type:

Article

Glutamine Synthetase in Legumes: Recent Advances in Enzyme Structure and Functional Genomics.

Published in:

International Journal of Molecular Sciences, 2012, v. 13, n. 7, p. 7994, doi. 10.3390/ijms13077994

By:

Betti, Marco;
García-Calderón, Margarita;
Pérez-Delgado, Carmen M.;
Credali, Alfredo;
Estivill, Guillermo;
Galván, Francisco;
Vega, José M.;
Márquez, Antonio J.

Publication type:

Article

Keys to Lipid Selection in Fatty Acid Amide Hydrolase Catalysis: Structural Flexibility, Gating Residues and Multiple Binding Pockets.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 6, p. 1, doi. 10.1371/journal.pcbi.1004231

By:

Palermo, Giulia;
Bauer, Inga;
Campomanes, Pablo;
Cavalli, Andrea;
Armirotti, Andrea;
Girotto, Stefania;
Rothlisberger, Ursula;
De Vivo, Marco

Publication type:

Article

The Natural History of Biocatalytic Mechanisms.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.pcbi.1003642

By:

Nath, Neetika;
Mitchell, John B. O.;
Caetano-Anollés, Gustavo

Publication type:

Article

Adaptation Dynamics in Densely Clustered Chemoreceptors.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.pcbi.1003230

By:

Pontius, William;
Sneddon, Michael W.;
Emonet, Thierry

Publication type:

Article

Modification of Lysine Residues of Horseradish Peroxidase and Its Effect on Stability and Structure of the Enzyme.

Published in:

Applied Biochemistry & Biotechnology, 2014, v. 172, n. 7, p. 3558, doi. 10.1007/s12010-014-0756-y

By:

Hassani, Leila;
Nourozi, Rasool

Publication type:

Article

Highly Efficient Phase Boundary Biocatalysis with Enzymogel Nanoparticles.

Published in:

Angewandte Chemie, 2014, v. 126, n. 2, p. 493, doi. 10.1002/ange.201306831

By:

Kudina, Olena;
Zakharchenko, Andrey;
Trotsenko, Oleksandr;
Tokarev, Alexander;
Ionov, Leonid;
Stoychev, Georgi;
Puretskiy, Nikolay;
Pryor, Scott W.;
Voronov, Andriy;
Minko, Sergiy

Publication type:

Article

Extensive site-directed mutagenesis reveals interconnected functional units in the Alkaline Phosphatase active site.

Published in:

eLife, 2015, p. 1, doi. 10.7554/eLife.06181

By:

Sunden, Fanny;
Peck, Ariana;
Salzman, Julia;
Herschlag, Daniel;
Ressl, Susanne

Publication type:

Article

Molecular characterization of the enzymes involved in the degradation of a brominated aromatic herbicide.

Published in:

Molecular Microbiology, 2013, v. 89, n. 6, p. 1121, doi. 10.1111/mmi.12332

By:

Chen, Kai;
Huang, Linglong;
Xu, Changfeng;
Liu, Xiaomei;
He, Jian;
Zinder, Stephen H.;
Li, Shunpeng;
Jiang, Jiandong

Publication type:

Article

THREE-DIMENSIONAL QUANTITATIVE STRUCTURE-ACTIVITY RELATIONSHIP AND COMPARATIVE MOLECULAR FIELD ANALYSIS OF CYP450 ENZYME SYSTEM INHIBITORS.

Published in:

Pharma Science Monitor, 2013, v. 4, n. 2, p. 3890

By:

Ananthula, Ravi Shekar;
Gade, Swetha;
Mahmood, S. K.

Publication type:

Article

Benzimidazolium Salts Containing Trifluoromethoxybenzyl: Synthesis, Characterization, Crystal Structure, Molecular Docking Studies and Enzymes Inhibitory Properties.

Published in:

Chemistry & Biodiversity, 2022, v. 19, n. 12, p. 1, doi. 10.1002/cbdv.202200257

By:

Hamide, Mahmut;
Gök, Yetkin;
Demir, Yeliz;
Sevinçek, Resul;
Taskin‐Tok, Tugba;
Tezcan, Burcu;
Aktaş, Aydın;
Gülçin, İlhami;
Aygün, Muhittin;
Güzel, Bilgehan

Publication type:

Article

Efficiency of Carbohydrate Additives on the Stability of Horseradish Peroxidase (HRP): HRP-Catalyzed Removal of Phenol and Malachite Green Decolorization from Wastewater.

Published in:

CLEAN: Soil, Air, Water, 2015, v. 43, n. 6, p. 846, doi. 10.1002/clen.201300858

By:

Kalaiarasan, Ellappan;
Palvannan, Thayumanavan

Publication type:

Article

Probing the Structural and Conformational Stability of the Wb-iPGM Enzyme and Role of Mn Ions in Their Catalytic Site.

Published in:

International Journal of Peptide Research & Therapeutics, 2015, v. 21, n. 4, p. 393, doi. 10.1007/s10989-015-9464-x

By:

Sharma, Om;
Hari Krishna, Kapa;
Suresh Kumar, Muthuvel

Publication type:

Article

Recombinant expression, molecular characterization and crystal structure of antitumor enzyme, L-lysine α-oxidase from Trichoderma viride.

Published in:

Journal of Biochemistry, 2015, v. 157, n. 6, p. 549, doi. 10.1093/jb/mvv012

By:

Marie Amano;
Haruka Mizuguchi;
Tadahisa Sano;
Hiroki Kondo;
Kengo Shinyashiki;
Junko Inagaki;
Takashi Tamura;
Tatsuya Kawaguchi;
Hitoshi Kusakabe;
Katsumi Imada;
Kenji Inagaki

Publication type:

Article

Structures and reaction mechanisms of the two related enzymes, PurN and PurU.

Published in:

Journal of Biochemistry, 2013, v. 154, n. 6, p. 569, doi. 10.1093/jb/mvt090

By:

Sampei, Gen-ichi;
Kanagawa, Mayumi;
Baba, Seiki;
Shimasaki, Toshiaki;
Taka, Hiroyuki;
Mitsui, Shohei;
Fujiwara, Shinji;
Yanagida, Yuki;
Kusano, Mayumi;
Suzuki, Sakiko;
Terao, Kayoko;
Kawai, Hiroya;
Fukai, Yoko;
Nakagawa, Noriko;
Ebihara, Akio;
Kuramitsu, Seiki;
Yokoyama, Shigeyuki;
Kawai, Gota

Publication type:

Article

Influence of Subunit Interface Mutations on Kinetic and Dynamic Properties of Alkaline Phosphatase from E. coli.

Published in:

Croatica Chemica Acta, 2013, v. 86, n. 2, p. 165, doi. 10.5562/cca2168

By:

Šprung, Matilda;
Bučević-Popović, Viljemka;
Soldo, Barbara;
Pavela-Vrančić, Maja;
Orhanović, Stjepan

Publication type:

Article

Evolutionary history of versatile-lipases from Agaricales through reconstruction of ancestral structures.

Published in:

BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-016-3419-2

By:

Barriuso, Jorge;
Martínez, María Jesús

Publication type:

Article

Soil bacterial community structure and extracellular enzyme activities under different land use types in a long-term reclaimed wetland.

Published in:

Journal of Soils & Sediments: Protection, Risk Assessment, & Remediation, 2019, v. 19, n. 5, p. 2543, doi. 10.1007/s11368-019-02262-1

By:

Huang, Lingling;
Hu, Wanjin;
Tao, Jin;
Liu, Yizhen;
Kong, Zhaoyu;
Wu, Lan

Publication type:

Article

α- L-Rhamnosyl-β- D-glucosidase (Rutinosidase) from Aspergillus niger: Characterization and Synthetic Potential of a Novel Diglycosidase.

Published in:

Advanced Synthesis & Catalysis, 2015, v. 357, n. 1, p. 107, doi. 10.1002/adsc.201400566

By:

Šimčíková, Daniela;
Kotik, Michael;
Weignerová, Lenka;
Halada, Petr;
Pelantová, Helena;
Adamcová, Kateřina;
Křen, Vladimír

Publication type:

Article

Genetic background of enhanced radioresistance in an anhydrobiotic insect: transcriptional response to ionizing radiations and desiccation.

Published in:

Extremophiles, 2017, v. 21, n. 1, p. 109, doi. 10.1007/s00792-016-0888-9

By:

Ryabova, Alina;
Mukae, Kyosuke;
Cherkasov, Alexander;
Cornette, Richard;
Shagimardanova, Elena;
Sakashita, Tetsuya;
Okuda, Takashi;
Kikawada, Takahiro;
Gusev, Oleg

Publication type:

Article

A novel thermostable and organic solvent-tolerant lipase from Xanthomonas oryzae pv. oryzae YB103: screening, purification and characterization.

Published in:

Extremophiles, 2016, v. 20, n. 2, p. 157, doi. 10.1007/s00792-016-0809-y

By:

Li, Mu;
Mo, Qiurun;
Liu, Aili;
Guo, Hailun;
Zhang, Yan

Publication type:

Article

Thermal adaptation of α-amylases: a review.

Published in:

Extremophiles, 2014, v. 18, n. 6, p. 937, doi. 10.1007/s00792-014-0674-5

By:

Hiteshi, Kalpana;
Gupta, Reena

Publication type:

Article

On DNA Motions under Action of Enzymes of Different Types. II.

Published in:

Crystallography Reports, 2019, v. 64, n. 1, p. 80, doi. 10.1134/S106377451901019X

By:

Pikin, S. A.;
Pikina, E. S.

Publication type:

Article

An R-Selective Hydroxynitrile Lyase from Arabidopsis thaliana with an α/β-Hydrolase Fold.

Published in:

Asian Journal of Control, 2013, v. 15, n. 6, p. 8679, doi. 10.1002/anie.200701455

By:

Andexer, Jennifer;
von Langermann, Jan;
Mell, Annett;
Bocola, Marco;
Kragl, Udo;
Eggert, Thorsten;
Pohl, Martina

Publication type:

Article

Enzyme encapsulation in magnetic chitosan-Fe3O4 microparticles.

Published in:

Journal of Microencapsulation, 2015, v. 32, n. 1, p. 16, doi. 10.3109/02652048.2014.940013

By:

Costa-Silva, Tales Alexandre;
Marques, Polyana Samorano;
Souza, Cláudia Regina Fernandes;
Said, Suraia;
Oliveira, Wanderley Pereira

Publication type:

Article

Extraction, characterization and molecular structure of bovine skin gelatin extracted with plant enzymes bromelain and zingibain.

Published in:

Journal of Food Science & Technology, 2020, v. 57, n. 10, p. 3772, doi. 10.1007/s13197-020-04409-2

By:

Ahmad, Tanbir;
Ismail, Amin;
Ahmad, Siti Aqlima;
Khalil, Khalilah Abdul;
Kee, Leo Teik;
Awad, Elmutaz Atta;
Sazili, Awis Qurni

Publication type:

Article

Functional Sites Induce Long-Range Evolutionary Constraints in Enzymes.

Published in:

PLoS Biology, 2016, v. 14, n. 5, p. 1, doi. 10.1371/journal.pbio.1002452

By:

Jack, Benjamin R.;
Meyer, Austin G.;
Echave, Julian;
Wilke, Claus O.

Publication type:

Article

The Landscape of Recombination Events That Create Nonribosomal Peptide Diversity.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 5, p. 2116, doi. 10.1093/molbev/msab015

By:

Baunach, Martin;
Chowdhury, Somak;
Stallforth, Pierre;
Dittmann, Elke

Publication type:

Article

The structure of allozyme variation in Silene nutans (Caryophyllaceae) in Denmark and in north-western Europe.

Published in:

Plant Systematics & Evolution, 2016, v. 302, n. 1, p. 23, doi. 10.1007/s00606-015-1240-z

By:

Van Rossum, Fabienne;
Weidema, Inger;
Martin, Hélène;
Cadre, Solenn;
Touzet, Pascal;
Prentice, Honor;
Philipp, Marianne

Publication type:

Article

Activity, Stability, and Structure of Native and Modified by Woodward Reagent K Mushroom Tyrosinase.

Published in:

Journal of Applied Spectroscopy, 2018, v. 84, n. 6, p. 1044, doi. 10.1007/s10812-018-0584-x

By:

Emami, S.;
Piri, H.;
Gheibi, N.

Publication type:

Article

A Comprehensive Analysis of Human CYP3A4 Crystal Structures as a Potential Tool for Molecular Docking-Based Site of Metabolism and Enzyme Inhibition Studies.

Published in:

Journal of Computational Biophysics & Chemistry, 2022, v. 21, n. 3, p. 259, doi. 10.1142/S2737416522300012

By:

Ridhwan, Mohamad Jemain Mohamad;
Bakar, Syahrul Imran Abu;
Latip, Normala Abd;
Ghani, Nurunajah Ab;
Ismail, Nor Hadiani

Publication type:

Article

Preparative and Structural Studies on [NiII(L)(N(CH2CH2S)2(CH2CH2SH))]0/1−1 (L = PEt3, SePh): A Thiol in the Secondary Coordination Sphere.

Published in:

Journal of the Chinese Chemical Society, 2013, v. 60, n. 7, p. 762, doi. 10.1002/jccs.201200558

By:

Chen, Chien-Hong;
Yen, Shih-Ying;
Huang, Tzu-Ting;
Lee, Gene-Hsiang;
Kuo, Ting-Shen;
Lee, Chien-Ming

Publication type:

Article

New Clues to Sleeping Sickness.

Published in:: JAMA: Journal of the American Medical Association, 2013, v. 309, n. 1, p. 20, doi. 10.1001/jama.2012.131057
Publication type:: Article

Structures of the inactive and active states of RIP2 kinase inform on the mechanism of activation.

Published in:

PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0177161

By:

Pellegrini, Erika;
Signor, Luca;
Singh, Saurabh;
Boeri Erba, Elisabetta;
Cusack, Stephen

Publication type:

Article

Utility of a Phylogenetic Perspective in Structural Analysis of CYP72A Enzymes from Flowering Plants.

Published in:

PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0163024

By:

Prall, Wil;
Hendy, Oliver;
Thornton, Leeann E.

Publication type:

Article

Large-Scale Recombinant Expression and Purification of Human Tyrosinase Suitable for Structural Studies.

Published in:

PLoS ONE, 2016, v. 11, n. 8, p. 1, doi. 10.1371/journal.pone.0161697

By:

Lai, Xuelei;
Soler-Lopez, Montserrat;
Wichers, Harry J.;
Dijkstra, Bauke W.

Publication type:

Article

Identification of novel small molecule inhibitors for endoplasmic reticulum oxidoreductase 1α (ERO1α) enzyme: structure-based molecular docking and molecular dynamic simulation studies.

Published in:

Journal of Biomolecular Structure & Dynamics, 2022, v. 40, n. 23, p. 13218, doi. 10.1080/07391102.2021.1984308

By:

Albassam, Hussam;
Mehta, Chetan H.;
Nayak, Usha Y.

Publication type:

Article

Structure and function of [NiFe] hydrogenases.

Published in:

Journal of Biochemistry, 2016, v. 160, n. 5, p. 251, doi. 10.1093/jb/mvw048

By:

Ogata, Hideaki;
Lubitz, Wolfgang;
Yoshiki Higuchi

Publication type:

Article

Crystal structures of bacterial FabH suggest a molecular basis for the substrate specificity of the enzyme

Published in:

FEBS Letters, 2009, v. 583, n. 17, p. 2939, doi. 10.1016/j.febslet.2009.08.001

By:

Gajiwala, Ketan S.;
Margosiak, Stephen;
Lu, Jia;
Cortez, Joseph;
Su, Ying;
Nie, Zhe;
Appelt, Krzysztof

Publication type:

Article

Genome-wide analysis of purple acid phosphatase structure and expression in ten vegetable species.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5022-1

By:

Xie, Lulu;
Shang, Qingmao

Publication type:

Article