Works matching Matthew Vaughn

Results: 49

"The Fairy Tale That Won't Behave"?: Ageing and Gender in Neil Gaiman's Stardust and Matthew Vaughn's Film Adaptation.

Published in:

Femspec, 2016, v. 16, n. 1, p. 19

By:

Crofts, Matthew;
Hatter, Janine

Publication type:

Article

Genomic Analysis of the DNA Replication Timing Program during Mitotic S Phase in Maize (Zea mays) Root Tips.

Published in:

Plant Cell, 2017, v. 29, n. 9, p. 2126, doi. 10.1105/tpc.17.00037

By:

Wear, Emily E.;
Song, Jawon;
Zynda, Gregory J.;
LeBlanc, Chantal;
Lee, Tae-Jin;
Mickelson-Young, Leigh;
Concia, Lorenzo;
Mulvaney, Patrick;
Szymanski, Eric S.;
Allen, George C.;
Martienssen, Robert A.;
Vaughn, Matthew W.;
Hanley-Bowdoin, Linda;
Thompson, William F.

Publication type:

Article

Genetic Perturbation of the Maize Methylome.

Published in:

Plant Cell, 2014, v. 26, n. 12, p. 4602, doi. 10.1105/tpc.114.133140

By:

Li, Qing;
Eichten, Steven R.;
Hermanson, Peter J.;
Zaunbrecher, Virginia M.;
Song, Jawon;
Wendt, Jennifer;
Rosenbaum, Heidi;
Madzima, Thelma F.;
Sloan, Amy E.;
Huang, Ji;
Burgess, Daniel L.;
Richmond, Todd A.;
McGinnis, Karen M.;
Meeley, Robert B.;
Danilevskaya, Olga N.;
Vaughn, Matthew W.;
Kaeppler, Shawn M.;
Jeddeloh, Jeffrey A.;
Springer, Nathan M.

Publication type:

Article

In Vivo Mapping of Arabidopsis Scaffold/Matrix Attachment Regions Reveals Link to Nucleosome-Disfavoring Poly(dA:dT) Tracts.

Published in:

Plant Cell, 2014, v. 26, n. 1, p. 102, doi. 10.1105/tpc.113.121194

By:

Pascuzzi, Pete E.;
Flores-Vergara, Miguel A.;
Lee, Tae-Jin;
Sosinski, Bryon;
Vaughn, Matthew W.;
Hanley-Bowdoin, Linda;
Thompson, William F.;
Allen, George C.

Publication type:

Article

Epigenetic and Genetic Influences on DNA Methylation Variation in Maize Populations.

Published in:

Plant Cell, 2013, v. 25, n. 8, p. 2783, doi. 10.1105/tpc.113.114793

By:

Eichten, Steven R.;
Briskine, Roman;
Song, Jawon;
Li, Qing;
Swanson-Wagner, Ruth;
Hermanson, Peter J.;
Waters, Amanda J.;
Starr, Evan;
West, Patrick T.;
Tiffin, Peter;
Myers, Chad L.;
Vaughn, Matthew W.;
Springer, Nathan M.

Publication type:

Article

Genomic Distribution of Maize Facultative Heterochromatin Marked by Trimethylation of H3K27.

Published in:

Plant Cell, 2013, v. 25, n. 3, p. 780, doi. 10.1105/tpc.112.106427

By:

Makarevitch, Irina;
Eichten, Steven R.;
Briskine, Roman;
Waters, Amanda J.;
Danilevskaya, Olga N.;
Meeley, Robert B.;
Myers, Chad L.;
Vaughn, Matthew W.;
Springer, Nathan M.

Publication type:

Article

Parent-of-Origin Effects on Gene Expression and DNA Methylation in the Maize Endosperm.

Published in:

Plant Cell, 2011, v. 23, n. 12, p. 4221, doi. 10.1105/tpc.111.092668

By:

Waters, Amanda J.;
Makarevitch, Irina;
Eichten, Steve R.;
Swanson-Wagner, Ruth A.;
Yeh, Cheng-Ting;
Xu, Wayne;
Schnable, Patrick S.;
Vaughn, Matthew W.;
Gehring, Mary;
Springer, Nathan M.

Publication type:

Article

An 'eFP‐Seq Browser' for visualizing and exploring RNA sequencing data.

Published in:

Plant Journal, 2019, v. 100, n. 3, p. 641, doi. 10.1111/tpj.14468

By:

Sullivan, Alexander;
Purohit, Priyank K.;
Freese, Nowlan H.;
Pasha, Asher;
Esteban, Eddi;
Waese, Jamie;
Wu, Alison;
Chen, Michelle;
Chin, Chih Y.;
Song, Richard;
Watharkar, Sneha R.;
Chan, Agnes P.;
Krishnakumar, Vivek;
Vaughn, Matthew W.;
Town, Chris;
Loraine, Ann E.;
Provart, Nicholas J.

Publication type:

Article

Differentiating Causes of Pediatric Madarosis: A Teaching Case Report.

Published in:

Optometric Education, 2025, v. 50, n. 1, p. 1

By:

Vaughn, Matthew T.

Publication type:

Article

Robustness and reproducibility of simple and complex synthetic logic circuit designs using a DBTL loop.

Published in:

Synthetic Biology (23977000), 2023, v. 8, n. 1, p. 1, doi. 10.1093/synbio/ysad005

By:

Cummins, Breschine;
Vrana, Justin;
Moseley, Robert C;
Eramian, Hamed;
Deckard, Anastasia;
Fontanarrosa, Pedro;
Bryce, Daniel;
Weston, Mark;
Zheng, George;
Nowak, Joshua;
Motta, Francis C;
Eslami, Mohammed;
Johnson, Kara Layne;
Goldman, Robert P;
Myers, Chris J;
Johnson, Tessa;
Vaughn, Matthew W;
Gaffney, Niall;
Urrutia, Joshua;
Gopaulakrishnan, Shweta

Publication type:

Article

toolkit for enhanced reproducibility of RNASeq analysis for synthetic biologists.

Published in:

Synthetic Biology (23977000), 2022, v. 7, n. 1, p. 1, doi. 10.1093/synbio/ysac012

By:

Garcia, Benjamin J;
Urrutia, Joshua;
Zheng, George;
Becker, Diveena;
Corbet, Carolyn;
Maschhoff, Paul;
Cristofaro, Alexander;
Gaffney, Niall;
Vaughn, Matthew;
Saxena, Uma;
Chen, Yi-Pei;
Gordon, D Benjamin;
Eslami, Mohammed

Publication type:

Article

The relationships between misinformation and outrage trolling tactics on two Yahoo! Answers categories.

Published in:

Journal of the Association for Information Science & Technology, 2021, v. 72, n. 12, p. 1498, doi. 10.1002/asi.24497

By:

Fichman, Pnina;
Vaughn, Matthew

Publication type:

Article

Genomic Distribution of H3K9me2 and DNA Methylation in a Maize Genome.

Published in:

PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0105267

By:

West, Patrick T.;
Li, Qing;
Ji, Lexiang;
Eichten, Steven R.;
Song, Jawon;
Vaughn, Matthew W.;
Schmitz, Robert J.;
Springer, Nathan M.

Publication type:

Article

Humanizing π-Class Glutathione S-Transferase Regulation in a Mouse Model Alters Liver Toxicity in Response to Acetaminophen Overdose.

Published in:

PLoS ONE, 2011, v. 6, n. 10, p. 1, doi. 10.1371/journal.pone.0025707

By:

Vaughn, Matthew P.;
Shinohara, Debika Biswal;
Castagna, Nicole;
Hicks, Jessica L.;
Netto, George;
De Marzo, Angelo M.;
Speed, Traci J.;
Reichert, Zachery R.;
Kwabi-Addo, Bernard;
Henderson, Colin J.;
Wolf, C. Roland;
Yegnasubramanian, Srinivasan;
Nelson, William G.

Publication type:

Article

Comparing DNA replication programs reveals large timing shifts at centromeres of endocycling cells in maize roots.

Published in:

PLoS Genetics, 2020, p. 1, doi. 10.1371/journal.pgen.1008623

By:

Wear, Emily E.;
Song, Jawon;
Zynda, Gregory J.;
Mickelson-Young, Leigh;
LeBlanc, Chantal;
Lee, Tae-Jin;
Deppong, David O.;
Allen, George C.;
Martienssen, Robert A.;
Vaughn, Matthew W.;
Hanley-Bowdoin, Linda;
Thompson, William F.

Publication type:

Article

ThaleMine: A Warehouse for Arabidopsis Data Integration and Discovery.

Published in:

Plant & Cell Physiology, 2017, v. 58, n. 1, p. 1, doi. 10.1093/pcp/pcw200

By:

Krishnakumar, Vivek;
Contrino, Sergio;
Chia-Yi Cheng;
Belyaeva, Irina;
Ferlanti, Erik S.;
Miller, Jason R.;
Vaughn, Matthew W.;
Micklem, Gos;
Town, Christopher D.;
Chan, Agnes P.

Publication type:

Article

Leveraging the national cyberinfrastructure for biomedical research.

Published in:

2014

By:

Leduc, Richard;
Vaughn, Matthew;
Fonner, John M;
Sullivan, Michael;
Williams, James G;
Blood, Philip D;
Taylor, James;
Barnett, William

Publication type:

journal article

Leveraging the national cyberinfrastructure for biomedical research.

Published in:

Journal of the American Medical Informatics Association, 2014, v. 21, n. 2, p. 195, doi. 10.1136/amiajnl-2013-002059

By:

LeDuc, Richard;
Vaughn, Matthew;
Fonner, John M.;
Sullivan, Michael;
Williams, James G.;
Blood, Philip D.;
Taylor, James;
Barnett, William

Publication type:

Article

The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences.

Published in:

PLoS Biology, 2016, v. 14, n. 1, p. 1, doi. 10.1371/journal.pbio.1002342

By:

Merchant, Nirav;
Lyons, Eric;
Goff, Stephen;
Vaughn, Matthew;
Ware, Doreen;
Micklos, David;
Antin, Parker

Publication type:

Article

Genome-wide transposon tagging reveals location-dependent effects on transcription and chromatin organization in Arabidopsis.

Published in:

Plant Journal, 2008, v. 55, n. 3, p. 514, doi. 10.1111/j.1365-313X.2008.03517.x

By:

Rosin, Faye M.;
Watanabe, Naohide;
Cacas, Jean-Luc;
Kato, Naohiro;
Arroyo, Juana M.;
Yuda Fang;
May, Bruce;
Vaughn, Matthew;
Simorowski, Joseph;
Ramu, Umamaheswari;
McCombie, Richard W.;
Spector, David L.;
Martienssen, Robert A.;
Lam, Eric

Publication type:

Article

Epigenomic Consequences of Immortalized Plant Cell Suspension Culture.

Published in:

PLoS Biology, 2008, v. 6, n. 12, p. e302, doi. 10.1371/journal.pbio.0060302

By:

Tanurdzic, Milos;
Vaughn, Matthew W.;
Hongmei Jiang;
Tae-Jin Lee;
Slotkin, R. Keith;
Sosinski, Bryon;
Thompson, William F.;
Doerge, R. W.;
Martienssen, Robert A.

Publication type:

Article

Repliscan: a tool for classifying replication timing regions.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1774-x

By:

Zynda, Gregory J.;
Jawon Song;
Concia, Lorenzo;
Wear, Emily E.;
Hanley-Bowdoin, Linda;
Thompson, William F.;
Vaughn, Matthew W.

Publication type:

Article

Protein phosphorylation plays a key role in sucrose-mediated transcriptional regulation of a phloem-specific proton-sucrose symporter.

Published in:

Planta: An International Journal of Plant Biology, 2003, v. 217, n. 3, p. 483, doi. 10.1007/s00425-003-1011-x

By:

Wendy D. Ransom-Hodgkins;
Matthew W. Vaughn;
Daniel R. Bush

Publication type:

Article

Role of transposable elements in heterochromatin and epigenetic control.

Published in:

Nature, 2004, v. 430, n. 6998, p. 471, doi. 10.1038/nature02651

By:

Lippman, Zachary;
Anne-Valérie Gendrel;
Black, Michael;
Vaughn, Matthew W.;
Dedhia, Neilay;
Mccombie, W. Richard;
Lavine, Kimberly;
Mittal, Vivek;
May, Bruce;
Kasschau, Kristin D.;
Carrington, James C.;
Doerge, Rebecca W.;
Colot, Vincent;
Martienssen, Rob

Publication type:

Article

"Other Souths": The Expression of Gay Identity in Absalom, Absalom!

Published in:

2007

By:

VAUGHN, MATTHEW R.

Publication type:

Editorial

Implementing Value-Based Payment Reform: A Conceptual Framework and Case Examples.

Published in:

2016

By:

Conrad, Douglas A.;
Vaughn, Matthew;
Grembowski, David;
Marcus-Smith, Miriam

Publication type:

journal article

Have Welsh agri‐environment schemes delivered for focal species? Results from a comprehensive monitoring programme.

Published in:

Journal of Applied Ecology, 2019, v. 56, n. 4, p. 812, doi. 10.1111/1365-2664.13329

By:

MacDonald, Michael A.;
Angell, Ruth;
Dines, Trevor D.;
Dodd, Stephen;
Haysom, Karen A.;
Hobson, Russel;
Johnstone, Ian G.;
Matthews, Vaughn;
Morris, Antony J.;
Parry, Rob;
Shellswell, Catharine H.;
Skates, James;
Tordoff, George M.;
Wilberforce, Elizabeth M.;
Manning, Peter

Publication type:

Article

Premeditation and Sensation Seeking Moderate the Reasoned Action and Social Reaction Pathways in the Prototype/Willingness Model of Alcohol Use.

Published in:

Substance Use & Misuse, 2016, v. 51, n. 6, p. 711, doi. 10.3109/10826084.2016.1152500

By:

Vaughn, Matthew Gregory;
King, Kevin M.

Publication type:

Article

Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs.

Published in:

BMC Bioinformatics, 2010, v. 11, p. 560, doi. 10.1186/1471-2105-11-560

By:

Kundeti, Vamsi K.;
Rajasekaran, Sanguthevar;
Hieu Dinh;
Vaughn, Matthew;
Thapar, Vishal

Publication type:

Article

Prediction of whole-cell transcriptional response with machine learning.

Published in:

Bioinformatics, 2022, v. 38, n. 2, p. 404, doi. 10.1093/bioinformatics/btab676

By:

Eslami, Mohammed;
Borujeni, Amin Espah;
Eramian, Hamed;
Weston, Mark;
Zheng, George;
Urrutia, Joshua;
Corbet, Carolyn;
Becker, Diveena;
Maschhoff, Paul;
Clowers, Katie;
Cristofaro, Alexander;
Hosseini, Hamid Doost;
Gordon, D Benjamin;
Dorfan, Yuval;
Singer, Jedediah;
Vaughn, Matthew;
Gaffney, Niall;
Fonner, John;
Stubbs, Joe;
Voigt, Christopher A

Publication type:

Article

Jetstream—Early operations performance, adoption, and impacts.

Published in:

Concurrency & Computation: Practice & Experience, 2019, v. 31, n. 16, p. N.PAG, doi. 10.1002/cpe.4683

By:

Hancock, David Y.;
Stewart, Craig A.;
Vaughn, Matthew;
Fischer, Jeremy;
Lowe, John Michael;
Turner, George;
Swetnam, Tyson L.;
Chafin, Tyler K.;
Afgan, Enis;
Pierce, Marlon E.;
Snapp‐Childs, Winona

Publication type:

Article

Araport: an application platform for data discovery.

Published in:

Concurrency & Computation: Practice & Experience, 2015, v. 27, n. 16, p. 4412, doi. 10.1002/cpe.3542

By:

Hanlon, Matthew R.;
Vaughn, Matthew;
Mock, Stephen;
Dooley, Rion;
Moreira, Walter;
Stubbs, Joe;
Town, Chris;
Miller, Jason;
Krishnakumar, Vivek;
Ferlanti, Erik;
Pence, Eleanor

Publication type:

Article

Discovery of biological networks using an optimized partial correlation coefficient with information theory algorithm on Stampede's Xeon and Xeon Phi processors.

Published in:

Concurrency & Computation: Practice & Experience, 2014, v. 26, n. 13, p. 2178, doi. 10.1002/cpe.3252

By:

Koesterke, Lars;
Koltes, James E.;
Weeks, Nathan T.;
Milfeld, Kent;
Vaughn, Matthew W.;
Reecy, James M.;
Stanzione, Dan

Publication type:

Article

CENP-B preserves genome integrity at replication forks paused by retrotransposon LTR.

Published in:

Nature, 2011, v. 469, n. 7328, p. 112, doi. 10.1038/nature09608

By:

Zaratiegui, Mikel;
Vaughn, Matthew W.;
Irvine, Danielle V.;
Goto, Derek;
Watt, Stephen;
Bähler, Jürg;
Arcangioli, Benoit;
Martienssen, Robert A.

Publication type:

Article

Feeding Neonates by Cup: A Systematic Review of the Literature.

Published in:

Maternal & Child Health Journal, 2016, v. 20, n. 8, p. 1620, doi. 10.1007/s10995-016-1961-9

By:

McKinney, Christy;
Glass, Robin;
Coffey, Patricia;
Rue, Tessa;
Vaughn, Matthew;
Cunningham, Michael

Publication type:

Article

Araport: the Arabidopsis Information Portal.

Published in:

Nucleic Acids Research, 2015, v. 43, n. D1, p. D1003, doi. 10.1093/nar/gku1200

By:

Krishnakumar, Vivek;
Hanlon, Matthew R.;
Contrino, Sergio;
Ferlanti, Erik S.;
Karamycheva, Svetlana;
Kim, Maria;
Rosen, Benjamin D.;
Cheng, Chia-Yi;
Moreira, Walter;
Mock, Stephen A.;
Stubbs, Joseph;
Sullivan, Julie M.;
Krampis, Konstantinos;
Miller, Jason R.;
Micklem, Gos;
Vaughn, Matthew;
Town, Christopher D.

Publication type:

Article

Subtle Perturbations of the Maize Methylome Reveal Genes and Transposons Silenced by Chromomethylase or RNA-Directed DNA Methylation Pathways.

Published in:

G3: Genes | Genomes | Genetics, 2018, v. 8, n. 6, p. 1921, doi. 10.1534/g3.118.200284

By:

Anderson, Sarah N.;
Zynda, Gregory J.;
Jawon Song;
Zhaoxue Han;
Vaughn, Matthew W.;
Qing Li;
Springer, Nathan M.

Publication type:

Article

Arabidopsis DNA Replication Initiates in Intergenic, AT-Rich Open Chromatin.

Published in:

Plant Physiology, 2020, v. 183, n. 1, p. 206, doi. 10.1104/pp.19.01520

By:

Wheeler, Emily;
Brooks, Ashley M.;
Concia, Lorenzo;
Vera, Daniel L.;
Wear, Emily E.;
LeBlanc, Chantal;
Ramu, Umamaheswari;
Vaughn, Matthew W.;
Bass, Hank W.;
Martienssen, Robert A.;
Thompson, William F.;
Hanley-Bowdoin, Linda

Publication type:

Article

Genome-Wide Analysis of the Arabidopsis Replication Timing Program.

Published in:

Plant Physiology, 2018, v. 176, n. 3, p. 2166, doi. 10.1104/pp.17.01537

By:

Concia, Lorenzo;
Brooks, Ashley M.;
Wheeler, Emily;
Zynda, Gregory J.;
Wear, Emily E.;
LeBlanc, Chantal;
Song, Jawon;
Tae-Jin Lee;
Pascuzzi, Pete E.;
Martienssen, Robert A.;
Vaughn, Matthew W.;
Thompson, William F.;
Hanley-Bowdoin, Linda

Publication type:

Article

Examining the Causes and Consequences of Context-Specific Differential DNA Methylation in Maize.

Published in:

Plant Physiology, 2015, v. 168, n. 4, p. 1262, doi. 10.1104/pp.15.00052

By:

Qing Li;
Jawon Song;
West, Patrick T.;
Zynda, Greg;
Eichten, Steven R.;
Vaughn, Matthew W.;
Springer, Nathan M.

Publication type:

Article

Spreading of Heterochromatin Is Limited to Specific Families of Maize Retrotransposons.

Published in:

PLoS Genetics, 2012, v. 8, n. 12, p. 1, doi. 10.1371/journal.pgen.1003127

By:

Eichten, Steven R.;
Ellis, Nathanael A.;
Makarevitch, Irina;
Cheng-Ting Yeh;
Gent, Jonathan I.;
Lin Guo;
McGinnis, Karen M.;
Xiaoyu Zhang;
Schnable, Patrick S.;
Vaughn, Matthew W.;
Dawe, R. Kelly;
Springer, Nathan M.

Publication type:

Article

Heritable Epigenetic Variation among Maize Inbreds.

Published in:

PLoS Genetics, 2011, v. 7, n. 11, p. 1, doi. 10.1371/journal.pgen.1002372

By:

Eichten, Steve R.;
Swanson-Wagner, Ruth A.;
Schnable, James C.;
Waters, Amanda J.;
Hermanson, Peter J.;
Liu, Sanzhen;
Yeh, Cheng-Ting;
Yi Jia;
Gendler, Karla;
Freeling, Michael;
Schnable, Patrick S.;
Vaughn, Matthew W.;
Springer, Nathan M.

Publication type:

Article

Arabidopsis thaliana Chromosome 4 Replicates in Two Phases That Correlate with Chromatin State.

Published in:

PLoS Genetics, 2010, v. 6, n. 6, p. 1, doi. 10.1371/journal.pgen.1000982

By:

Tae-Jin Lee;
Pascuzzi, Pete E.;
Settlage, Sharon B.;
Shultz, Randall W.;
Tanurdzic, Milos;
Rabinowicz, Pablo D.;
Menges, Margit;
Ping Zheng;
Main, Dorrie;
Murray, James A. H.;
Sosinski, Bryon;
Allen, George C.;
Martienssen, Robert A.;
Hanley-Bowdoin, Linda;
Vaughn, Matthew W.;
Thompson, William F.

Publication type:

Article

Reviews.

Published in:

Comedy Studies, 2010, v. 1, n. 2, p. 219, doi. 10.1386/cost.1.2.219_4

By:

Friedman, Sam;
Jenness, Joe;
Ritchie, Chris;
Jenness, Joseph;
Cox, Amy;
Harris, James

Publication type:

Article

Ageing All Over Again.

Published in:

Femspec, 2016, v. 16, n. 1, p. 10

By:

Allmand-Zeman, Jana;
Hatter, Janine;
Weinbaum, Batya

Publication type:

Article

JUDICIAL LAW.

Published in:

Bench & Bar of Minnesota, 2017, v. 74, n. 3, p. 29

By:

BRUNO, FREDERIC;
FOERTSCH, SAMANTHA

Publication type:

Article

The Essentials of CoreSinging: A Joyful Approach to Singing and Voice Pedagogy.

Published in:

2024

By:

Librach, Lily

Publication type:

Book Review

FALLING DOWN IN ORDER TO GROW UP: TWO WOMEN'S JOURNEYS FROM UN-DOMESTICATION TO DOMESTICATION IN FANTASY FICTION.

Published in:

Mousaion, 2015, v. 33, n. 2, p. 73

By:

Potter, Mary-Anne;
Byrne, Deirdre

Publication type:

Article

Kingsman: The Secret Service.

Published in:

2016

By:

Canavan, Gerry

Publication type:

Film/TV Criticism and Review