Found: 62
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Rvisdiff: An R package for interactive visualization of differential expression.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1349205
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Rhizobium etli CFN42 and Sinorhizobium meliloti 1021 bioinformatic transcriptional regulatory networks from culture and symbiosis.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1419274
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Design principles for molecular animation.
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- Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1353807
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Supplementary Material.
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- Frontiers in Bioinformatics, 2024, p. 1
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Editorial: Big data and artificial intelligence for genomics and therapeutics - Proceedings of the 19th Annual Meeting of the MidSouth Computational Biology and Bioinformatics Society (MCBIOS).
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- Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1470107
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Editorial: Machine learning approaches to antimicrobials: discovery and resistance.
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- Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1458237
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RIPS (rapid intuitive pathogen surveillance): a tool for surveillance of genome sequence data from foodborne bacterial pathogens.
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- Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1415078
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A hybrid approach for predicting transcription factors.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1425419
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In silico studies of benzothiazole derivatives as potential inhibitors of Anopheles funestus and Anopheles gambiae trehalase.
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- Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1428539
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Predictive identification and design of potent inhibitors targeting resistance-inducing candidate genes from E. coli whole-genome sequences.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1411935
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AUTO-TUNE: selecting the distance threshold for inferring HIV transmission clusters.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1400003
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The evolution of mammalian Rem2: unraveling the impact of purifying selection and coevolution on protein function, and implications for human disorders.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1381540
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A systematic overview of single-cell transcriptomics databases, their use cases, and limitations.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1417428
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Network analysis of driver genes in human cancers.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1365200
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DNA structural features and variability of complete MHC locus sequences.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1392613
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Maximum-scoring path sets on pangenome graphs of constant treewidth.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1391086
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CAEM-GBDT: a cancer subtype identifying method using multi-omics data and convolutional autoencoder network.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1403826
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The evolution of mammalian Rem2: unraveling the impact of purifying selection and coevolution on protein function, and implications for human disorders.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1381540
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- Publication type:
- Article
A comprehensive multi-omics analysis reveals unique signatures to predict Alzheimer's disease.
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- Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1390607
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Effects of highly active antiretroviral therapy initiation on epigenomic DNA methylation in persons living with HIV.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1357889
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Decreased but persistent epigenetic age acceleration is associated with changes in T-cell subsets after initiation of highly active antiretroviral therapy in persons living with HIV.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1356509
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Human cytokine and coronavirus nucleocapsid protein interactivity using large-scale virtual screens.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1397968
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BayesAge: A maximum likelihood algorithm to predict epigenetic age.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1329144
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Editorial: Computational methods for analysis of DNA methylation data, volume II.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1415791
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PAGER-scFGA: unveiling cell functions and molecular mechanisms in cell trajectories through single-cell functional genomics analysis.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1336135
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From complex data to clear insights: visualizing molecular dynamics trajectories.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1356659
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Prediction of polyspecificity from antibody sequence data by machine learning.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2023.1286883
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Pathway-based analyses of gene expression profiles at low doses of ionizing radiation.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1280971
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ursaPGx: a new R package to annotate pharmacogenetic star alleles using phased whole-genome sequencing data.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1351620
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A systematic evaluation of state-of-the-art deconvolution methods in spatial transcriptomics: insights from cardiovascular disease and chronic kidney disease.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1352594
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Sequencing technologies and hardware-accelerated parallel computing transform computational genomics research.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1384497
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Detecting subtle transcriptomic perturbations induced by lncRNAs knock-down in single-cell CRISPRi screening using a new sparse supervised autoencoder neural network.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1340339
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Ten common issues with reference sequence databases and how to mitigate them.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1278228
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bootGSEA: a bootstrap and rank aggregation pipeline for multi-study and multi-omics enrichment analyses.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1380928
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Computational identification of antibody-binding epitopes from mimotope datasets.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1295972
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Predicting cell population-specific gene expression from genomic sequence.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1347276
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An interactive visualization tool for educational outreach in protein contact map overlap analysis.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1358550
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Where are we in the implementation of tissue-specific epigenetic clocks?
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1306244
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MARTin--an open-source platform for microarray analysis.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1329062
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A network-based method for associating genes with autism spectrum disorder.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1295600
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Posterior inference of Hi-C contact frequency through sampling.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2023.1285828
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A perspective on FAIR quality control in multiplexed imaging data processing.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1336257
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Limits of experimental evidence in RNA secondary structure prediction.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1346779
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MetaWin 3: open-source software for meta-analysis.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1305969
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AlignScape, displaying sequence similarity using self-organizing maps.
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- Frontiers in Bioinformatics, 2024, p. 1
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MRSLpred--a hybrid approach for predicting multi-label subcellular localization of mRNA at the genome scale.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1341479
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Snowflake: visualizing microbiome abundance tables as multivariate bipartite graphs.
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- Frontiers in Bioinformatics, 2024, p. 01, doi. 10.3389/fbinf.2024.1331043
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Making bioinformatics training FAIR: the EMBL-EBI training portal.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1347168
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Systematic computational hunting for small RNAs derived from ncRNAs during dengue virus infection in endothelial HMEC-1 cells.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1293412
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Editorial: Phasor analysis for fluorescence lifetime data.
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- Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1375480
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