Works in Environmental Microbiome, 2020, Vol 15, Issue 1

Results: 21

Microbial mats in the Turks and Caicos Islands reveal diversity and evolution of phototrophy in the Chloroflexota order Aggregatilineales.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00357-8

By:

Ward, Lewis M.;
Lingappa, Usha F.;
Grotzinger, John P.;
Fischer, Woodward W.

Publication type:

Article

Genome-centric resolution of novel microbial lineages in an excavated Centrosaurus dinosaur fossil bone from the Late Cretaceous of North America.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00355-w

By:

Liang, Renxing;
Lau, Maggie C. Y.;
Saitta, Evan T.;
Garvin, Zachary K.;
Onstott, Tullis C.

Publication type:

Article

Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00354-x

By:

Maus, Irena;
Klocke, Michael;
Derenkó, Jaqueline;
Stolze, Yvonne;
Beckstette, Michael;
Jost, Carsten;
Wibberg, Daniel;
Blom, Jochen;
Henke, Christian;
Willenbücher, Katharina;
Rumming, Madis;
Rademacher, Antje;
Pühler, Alfred;
Sczyrba, Alexander;
Schlüter, Andreas

Publication type:

Article

Unravelling the effects of tropical land use conversion on the soil microbiome.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-0353-3

By:

Berkelmann, Dirk;
Schneider, Dominik;
Meryandini, Anja;
Daniel, Rolf

Publication type:

Article

Falling bacterial communities from the atmosphere.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00369-4

By:

Woo, Cheolwoon;
Yamamoto, Naomichi

Publication type:

Article

The distribution of microbiomes and resistomes across farm environments in conventional and organic dairy herds in Pennsylvania.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00368-5

By:

Pitta, Dipti W.;
Indugu, Nagaraju;
Toth, John D.;
Bender, Joseph S.;
Baker, Linda D.;
Hennessy, Meagan L.;
Vecchiarelli, Bonnie;
Aceto, Helen;
Dou, Zhengxia

Publication type:

Article

A rather dry subject; investigating the study of arid-associated microbial communities.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. N.PAG, doi. 10.1186/s40793-020-00367-6

By:

Osborne, Peter;
Hall, Lindsay J.;
Kronfeld-Schor, Noga;
Thybert, David;
Haerty, Wilfried

Publication type:

Article

Correction to: Reducing the arbitrary: fuzzy detection of microbial ecotones and ecosystems – focus on the pelagic environment.

Published in:

2020

By:

Bagnaro, Antoine;
Baltar, Federico;
Brownstein, Gretchen;
Lee, William G.;
Morales, Sergio E.;
Pritchard, Daniel W.;
Hepburn, Christopher D.

Publication type:

Correction Notice

Seasonal dynamics in taxonomy and function within bacterial and viral metagenomic assemblages recovered from a freshwater agricultural pond.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. N.PAG, doi. 10.1186/s40793-020-00365-8

By:

Chopyk, Jessica;
Nasko, Daniel J.;
Allard, Sarah;
Bui, Anthony;
Pop, Mihai;
Mongodin, Emmanuel F.;
Sapkota, Amy R.

Publication type:

Article

Trichomes form genotype-specific microbial hotspots in the phyllosphere of tomato.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. N.PAG, doi. 10.1186/s40793-020-00364-9

By:

Kusstatscher, Peter;
Wicaksono, Wisnu Adi;
Bergna, Alessandro;
Cernava, Tomislav;
Bergau, Nick;
Tissier, Alain;
Hause, Bettina;
Berg, Gabriele

Publication type:

Article

Reducing the arbitrary: fuzzy detection of microbial ecotones and ecosystems – focus on the pelagic environment.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00363-w

By:

Bagnaro, Antoine;
Baltar, Federico;
Brownstein, Gretchen;
Lee, William G.;
Morales, Sergio E.;
Pritchard, Daniel W.;
Hepburn, Christopher D.

Publication type:

Article

BLAST-QC: automated analysis of BLAST results.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00361-y

By:

Torkian, Behzad;
Hann, Spencer;
Preisner, Eva;
Norman, R. Sean

Publication type:

Article

Performance evaluation of high-volume electret filter air samplers in aerosol microbiome research.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00362-x

By:

Bøifot, Kari Oline;
Gohli, Jostein;
Skogan, Gunnar;
Dybwad, Marius

Publication type:

Article

Correction to: Contrast diversity patterns and processes of microbial community assembly in a river-lake continuum across a catchment scale in northwestern China.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00360-z

By:

Tang, Xiangming;
Xie, Guijuan;
Shao, Keqiang;
Hu, Yang;
Cai, Jian;
Bai, Chengrong;
Gong, Yi;
Gao, Guang

Publication type:

Article

Meeting report of the third annual Tri-Service Microbiome Consortium symposium.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00359-6

By:

Karl, J. Philip;
Barbato, Robyn A.;
Doherty, Laurel A.;
Gautam, Aarti;
Glaven, Sarah M.;
Kokoska, Robert J.;
Leary, Dagmar;
Mickol, Rebecca L.;
Perisin, Matthew A.;
Hoisington, Andrew J.;
Van Opstal, Edward J.;
Varaljay, Vanessa;
Kelley-Loughnane, Nancy;
Mauzy, Camilla A.;
Goodson, Michael S.;
Soares, Jason W.

Publication type:

Article

Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00358-7

By:

Wemheuer, Franziska;
Taylor, Jessica A.;
Daniel, Rolf;
Johnston, Emma;
Meinicke, Peter;
Thomas, Torsten;
Wemheuer, Bernd

Publication type:

Article

Contrast diversity patterns and processes of microbial community assembly in a river-lake continuum across a catchment scale in northwestern China.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00356-9

By:

Tang, Xiangming;
Xie, Guijuan;
Shao, Keqiang;
Hu, Yang;
Cai, Jian;
Bai, Chengrong;
Gong, Yi;
Gao, Guang

Publication type:

Article

Characterization of the microbiome associated with in situ earthen materials.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-019-0350-6

By:

Simons, Alexis;
Bertron, Alexandra;
Aubert, Jean-Emmanuel;
Roux, Christophe;
Roques, Christine

Publication type:

Article

Microbial community dynamics and coexistence in a sulfide-driven phototrophic bloom.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-019-0348-0

By:

Bhatnagar, Srijak;
Cowley, Elise S.;
Kopf, Sebastian H.;
Pérez Castro, Sherlynette;
Kearney, Sean;
Dawson, Scott C.;
Hanselmann, Kurt;
Ruff, S. Emil

Publication type:

Article

Performance evaluation of a new custom, multi-component DNA isolation method optimized for use in shotgun metagenomic sequencing-based aerosol microbiome research.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-019-0349-z

By:

Bøifot, Kari Oline;
Gohli, Jostein;
Moen, Line Victoria;
Dybwad, Marius

Publication type:

Article

Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-019-0352-4

By:

Abraham, Briana S.;
Caglayan, Deniz;
Carrillo, Natalie V.;
Chapman, Matthew C.;
Hagan, Claire T.;
Hansen, Skye T.;
Jeanty, Ralph O.;
Klimczak, Alexander A.;
Klingler, Marcos J.;
Kutcher, Thomas P.;
Levy, Sydney H.;
Millard-Bruzos, Angel A.;
Moore, Thomas B.;
Prentice, David J.;
Prescott, Matthew E.;
Roehm, Richard;
Rose, Jordan A.;
Yin, Mulan;
Hyodo, Ayumi;
Lail, Kathleen

Publication type:

Article