Works matching IS 2399-3642 AND VI 6 AND IP 1 AND DT 2023

Results: 1249

RENGE infers gene regulatory networks using time-series single-cell RNA-seq data with CRISPR perturbations.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05594-4

By:

Ishikawa, Masato;
Sugino, Seiichi;
Masuda, Yoshie;
Tarumoto, Yusuke;
Seto, Yusuke;
Taniyama, Nobuko;
Wagai, Fumi;
Yamauchi, Yuhei;
Kojima, Yasuhiro;
Kiryu, Hisanori;
Yusa, Kosuke;
Eiraku, Mototsugu;
Mochizuki, Atsushi

Publication type:

Article

ppGpp accumulation reduces the expression of the global nitrogen homeostasis-modulating NtcA regulon by affecting 2-oxoglutarate levels.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05632-1

By:

Hidese, Ryota;
Ohbayashi, Ryudo;
Kato, Yuichi;
Matsuda, Mami;
Tanaka, Kan;
Imamura, Sousuke;
Ashida, Hiroki;
Kondo, Akihiko;
Hasunuma, Tomohisa

Publication type:

Article

Publisher Correction: Novel WYL domain-containing transcriptional activator acts in response to genotoxic stress in rapidly growing mycobacteria.

Published in:

2023

By:

Keller, Lena Maria Leone;
Flattich, Kim;
Weber-Ban, Eilika

Publication type:

Correction Notice

Optimal tagging strategies for illuminating expression profiles of genes with different abundance in zebrafish.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05686-1

By:

Liu, Jiannan;
Li, Wenyuan;
Jin, Xuepu;
Lin, Fanjia;
Han, Jiahuai;
Zhang, Yingying

Publication type:

Article

Impaired FADD/BID signaling mediates cross-resistance to immunotherapy in Multiple Myeloma.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05683-4

By:

Munawar, Umair;
Zhou, Xiang;
Prommersberger, Sabrina;
Nerreter, Silvia;
Vogt, Cornelia;
Steinhardt, Maximilian J.;
Truger, Marietta;
Mersi, Julia;
Teufel, Eva;
Han, Seungbin;
Haertle, Larissa;
Banholzer, Nicole;
Eiring, Patrick;
Danhof, Sophia;
Navarro-Aguadero, Miguel Angel;
Fernandez-Martin, Adrian;
Ortiz-Ruiz, Alejandra;
Barrio, Santiago;
Gallardo, Miguel;
Valeri, Antonio

Publication type:

Article

Atomistic ensemble of active SHP2 phosphatase.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05682-5

By:

Anselmi, Massimiliano;
Hub, Jochen S.

Publication type:

Article

FTO-mediated m<sup>6</sup>A demethylation regulates GnRH expression in the hypothalamus via the PLCβ3/Ca<sup>2+</sup>/CAMK signalling pathway.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05677-2

By:

Zang, Shaolian;
Yin, Xiaoqin;
Li, Pin

Publication type:

Article

Single-cell morphological and transcriptome analysis unveil inhibitors of polyploid giant breast cancer cells in vitro.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05674-5

By:

Zhou, Mengli;
Ma, Yushu;
Chiang, Chun-Cheng;
Rock, Edwin C.;
Butler, Samuel Charles;
Anne, Rajiv;
Yatsenko, Svetlana;
Gong, Yinan;
Chen, Yu-Chih

Publication type:

Article

Cerebellar vermis joins the brain's social network.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05673-6

By:

Saito, Viviane M.

Publication type:

Article

Transcriptional state dynamics lead to heterogeneity and adaptive tumor evolution in urothelial bladder carcinoma.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05668-3

By:

Biswas, Antara;
Sahoo, Sarthak;
Riedlinger, Gregory M.;
Ghodoussipour, Saum;
Jolly, Mohit K.;
De, Subhajyoti

Publication type:

Article

Chromatin regulator SMARCAL1 modulates cellular lipid metabolism.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05665-6

By:

Nagai, Taylor Hanta;
Hartigan, Chrissy;
Mizoguchi, Taiji;
Yu, Haojie;
Deik, Amy;
Bullock, Kevin;
Wang, Yanyan;
Cromley, Debra;
Schenone, Monica;
Cowan, Chad A.;
Rader, Daniel J.;
Clish, Clary B.;
Carr, Steven A.;
Xu, Yu-Xin

Publication type:

Article

Genetic differentiation at probe SNPs leads to spurious results in meQTL discovery.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05658-5

By:

Meeks, Gillian L.;
Henn, Brenna M.;
Gopalan, Shyamalika

Publication type:

Article

Reply to: Genetic differentiation at probe SNPs leads to spurious results in meQTL discovery.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05646-9

By:

Cheng, Youshu;
Li, Boyang;
Zhang, Xinyu;
Aouizerat, Bradley E.;
Zhao, Hongyu;
Xu, Ke

Publication type:

Article

Hyperactive Natural Killer cells in Rag2 knockout mice inhibit the development of acute myeloid leukemia.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05606-3

By:

Sugimoto, Emi;
Li, Jingmei;
Hayashi, Yasutaka;
Iida, Kohei;
Asada, Shuhei;
Fukushima, Tsuyoshi;
Tamura, Moe;
Shikata, Shiori;
Zhang, Wenyu;
Yamamoto, Keita;
Kawabata, Kimihito Cojin;
Kawase, Tatsuya;
Saito, Takeshi;
Yoshida, Taku;
Yamazaki, Satoshi;
Kaito, Yuta;
Imai, Yoichi;
Denda, Tamami;
Ota, Yasunori;
Fukuyama, Tomofusa

Publication type:

Article

Microbes control Drosophila germline stem cell increase and egg maturation through hormonal pathways.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05660-x

By:

Suyama, Ritsuko;
Cetraro, Nicolas;
Yew, Joanne Y.;
Kai, Toshie

Publication type:

Article

Divisively normalized neuronal processing of uncertain visual feedback for visuomotor learning.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05578-4

By:

Makino, Yuto;
Hayashi, Takuji;
Nozaki, Daichi

Publication type:

Article

Discovery and characterization of genes conferring natural resistance to the antituberculosis antibiotic capreomycin.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05681-6

By:

Toh, Shu-Ing;
Elaine Keisha, Johan;
Wang, Yung-Lin;
Pan, Yi-Chi;
Jhu, Yu-Heng;
Hsiao, Po-Yun;
Liao, Wen-Ting;
Chen, Po-Yuan;
Ko, Tai-Ming;
Chang, Chin-Yuan

Publication type:

Article

Psychedelic concentrations of nitrous oxide reduce functional differentiation in frontoparietal and somatomotor cortical networks.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05678-1

By:

Dai, Rui;
Huang, Zirui;
Larkin, Tony E.;
Tarnal, Vijay;
Picton, Paul;
Vlisides, Phillip E.;
Janke, Ellen;
McKinney, Amy;
Hudetz, Anthony G.;
Harris, Richard E.;
Mashour, George A.

Publication type:

Article

Modulation of memory reconsolidation by adjacent novel tasks: timing defines the nature of change.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05666-5

By:

Schroeder, Matías Nicolás;
Fullio, Camila L.;
Ballarini, Fabricio;
Moncada, Diego

Publication type:

Article

Author Correction: Activated cofilin exacerbates tau pathology by impairing tau-mediated microtubule dynamics.

Published in:

2023

By:

Woo, Jung-A. A.;
Liu, Tian;
Fang, Cenxiao C.;
Cazzaro, Sara;
Kee, Teresa;
LePochat, Patrick;
Yrigoin, Ksenia;
Penn, Courtney;
Zhao, Xingyu;
Wang, Xinming;
Liggett, Stephen B.;
Kang, David E.

Publication type:

Correction Notice

Acid phosphatase-like proteins, a biogenic amine and leukotriene-binding salivary protein family from the flea Xenopsylla cheopis.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05679-0

By:

Lu, Stephen;
Andersen, John F.;
Bosio, Christopher F.;
Hinnebusch, B. Joseph;
Ribeiro, José M.

Publication type:

Article

Neuronal gene expression in two generations of the marine parasitic worm, Cryptocotyle lingua.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05675-4

By:

Tolstenkov, Oleg;
Chatzigeorgiou, Marios;
Gorbushin, Alexander

Publication type:

Article

Locked and loaded: targeting extracellular vesicles to preserve sight.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05672-7

By:

Wooff, Yvette

Publication type:

Article

Tumor microenvironment remodeling plus immunotherapy could be used in mesenchymal-like tumor with high tumor residual and drug resistant rate.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05667-4

By:

Shen, Shuai;
Liu, Xing;
Guo, Qing;
Liang, Qingyu;
Wu, Jianqi;
Guan, Gefei;
Zou, Cunyi;
Zhu, Chen;
Yan, Zihao;
Liu, Tianqi;
Chen, Ling;
Cheng, Peng;
Cheng, Wen;
Wu, Anhua

Publication type:

Article

Time-dependent homeostatic mechanisms underlie brain-derived neurotrophic factor action on neural circuitry.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05638-9

By:

O'Neill, Kate M.;
Anderson, Erin D.;
Mukherjee, Shoutik;
Gandu, Srinivasa;
McEwan, Sara A.;
Omelchenko, Anton;
Rodriguez, Ana R.;
Losert, Wolfgang;
Meaney, David F.;
Babadi, Behtash;
Firestein, Bonnie L.

Publication type:

Article

Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05579-3

By:

Vasquez, Sheena;
Marquez, Melissa D.;
Brignole, Edward J.;
Vo, Amanda;
Kong, Sunnie;
Park, Christopher;
Perlstein, Deborah L.;
Drennan, Catherine L.

Publication type:

Article

The rocky relationship between global warming and ocean biodiversity: an interview with Rui Seabra.

Published in:: 2023
Publication type:: Proceeding

NLRP1- A CINDERELLA STORY: a perspective of recent advances in NLRP1 and the questions they raise.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05684-3

By:

Barry, Kristian;
Murphy, Christopher;
Mansell, Ashley

Publication type:

Article

Arsenic is a potent co-mutagen of ultraviolet light.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05659-4

By:

Speer, Rachel M.;
Nandi, Shuvro P.;
Cooper, Karen L.;
Zhou, Xixi;
Yu, Hui;
Guo, Yan;
Hudson, Laurie G.;
Alexandrov, Ludmil B.;
Liu, Ke Jian

Publication type:

Article

The co-crystal structure of Cbl-b and a small-molecule inhibitor reveals the mechanism of Cbl-b inhibition.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05655-8

By:

Kimani, Serah W.;
Perveen, Sumera;
Szewezyk, Magdalena;
Zeng, Hong;
Dong, Aiping;
Li, Fengling;
Ghiabi, Pegah;
Li, Yanjun;
Chau, Irene;
Arrowsmith, Cheryl H.;
Barsyte-Lovejoy, Dalia;
Santhakumar, Vijayaratnam;
Vedadi, Masoud;
Halabelian, Levon

Publication type:

Article

The centrosomal protein 131 participates in the regulation of mitochondrial apoptosis.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05676-3

By:

Renaud, Clotilde C. N.;
Trillet, Kilian;
Jardine, Jane;
Merlet, Laura;
Renoult, Ophélie;
Laurent—Blond, Mélanie;
Catinaud, Zoé;
Pecqueur, Claire;
Gavard, Julie;
Bidère, Nicolas

Publication type:

Article

Evolution of lysine-specific demethylase 1 and REST corepressor gene families and their molecular interaction.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05652-x

By:

Olivares-Costa, Montserrat;
Oyarzún, Gianluca Merello;
Verbel-Vergara, Daniel;
González, Marcela P.;
Arancibia, Duxan;
Andrés, María E.;
Opazo, Juan C.

Publication type:

Article

scPML: pathway-based multi-view learning for cell type annotation from single-cell RNA-seq data.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05634-z

By:

Du, Zhi-Hua;
Hu, Wei-Lin;
Li, Jian-Qiang;
Shang, Xuequn;
You, Zhu-Hong;
Chen, Zhuang-zhuang;
Huang, Yu-An

Publication type:

Article

Akaluc/AkaLumine bioluminescence system enables highly sensitive, non-invasive and temporal monitoring of gene expression in Drosophila.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05628-x

By:

Ito, Akira;
Matsuda, Nagisa;
Ukita, Yumiko;
Okumura, Misako;
Chihara, Takahiro

Publication type:

Article

Neuronal Gtf2i deletion alters mitochondrial and autophagic properties.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05612-5

By:

Nir Sade, Ariel;
Levy, Gilad;
Schokoroy Trangle, Sari;
Elad Sfadia, Galit;
Bar, Ela;
Ophir, Omer;
Fischer, Inbar;
Rokach, May;
Atzmon, Andrea;
Parnas, Hadar;
Rosenberg, Tali;
Marco, Asaf;
Elroy Stein, Orna;
Barak, Boaz

Publication type:

Article

Parkin-mediated ubiquitination inhibits BAK apoptotic activity by blocking its canonical hydrophobic groove.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05650-z

By:

Cheng, Peng;
Hou, Yuzhu;
Bian, Mingxing;
Fang, Xueru;
Liu, Yan;
Rao, Yuanfang;
Cao, Shuo;
Liu, Yanjun;
Zhang, Shuai;
Chen, Yanke;
Dong, Xu;
Liu, Zhu

Publication type:

Article

Longitudinal development of the human white matter structural connectome and its association with brain transcriptomic and cellular architecture.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05647-8

By:

Feng, Guozheng;
Chen, Rui;
Zhao, Rui;
Li, Yuanyuan;
Ma, Leilei;
Wang, Yanpei;
Men, Weiwei;
Gao, Jiahong;
Tan, Shuping;
Cheng, Jian;
He, Yong;
Qin, Shaozheng;
Dong, Qi;
Tao, Sha;
Shu, Ni

Publication type:

Article

Acute irradiation induces a senescence-like chromatin structure in mammalian oocytes.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05641-0

By:

Baumann, Claudia;
Zhang, Xiangyu;
Kandasamy, Muthugapatti K.;
Mei, Xiaohan;
Chen, Shiyou;
Tehrani, Kayvan F.;
Mortensen, Luke J.;
Watford, Wendy;
Lall, Ashley;
De La Fuente, Rabindranath

Publication type:

Article

Hypothalamic supramammillary neurons that project to the medial septum modulate wakefulness in mice.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05637-w

By:

Liang, Mengru;
Jian, Tingliang;
Tao, Jie;
Wang, Xia;
Wang, Rui;
Jin, Wenjun;
Chen, Qianwei;
Yao, Jiwei;
Zhao, Zhikai;
Yang, Xinyu;
Xiao, Jingyu;
Yang, Zhiqi;
Liao, Xiang;
Chen, Xiaowei;
Wang, Liecheng;
Qin, Han

Publication type:

Article

Video-rate 3D imaging of living cells using Fourier view-channel-depth light field microscopy.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05636-x

By:

Yi, Chengqiang;
Zhu, Lanxin;
Sun, Jiahao;
Wang, Zhaofei;
Zhang, Meng;
Zhong, Fenghe;
Yan, Luxin;
Tang, Jiang;
Huang, Liang;
Zhang, Yu-Hui;
Li, Dongyu;
Fei, Peng

Publication type:

Article

Network-based restoration strategies maximize ecosystem recovery.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05622-3

By:

Bhatia, Udit;
Dubey, Sarth;
Gouhier, Tarik C.;
Ganguly, Auroop R.

Publication type:

Article

Linking microbiome and stress hormone responses in wild tropical treefrogs across continuous and fragmented forests.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05600-9

By:

Neely, Wesley J.;
Martins, Renato A.;
Mendonça da Silva, Camila M.;
Ferreira da Silva, Tainá;
Fleck, Lucas E.;
Whetstone, Ross D.;
Woodhams, Douglas C.;
Cook, W. Harrison;
Prist, Paula R.;
Valiati, Victor H.;
Greenspan, Sasha E.;
Tozetti, Alexandro M.;
Earley, Ryan L.;
Becker, C. Guilherme

Publication type:

Article

Thoracic and abdominal outgrowths in early pterygotes: a clue to the common ancestor of winged insects?

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05568-6

By:

Prokop, Jakub;
Rosová, Kateřina;
Leipner, Angelika;
Sroka, Pavel

Publication type:

Article

A Maastrichtian insect assemblage from Patagonia sheds light on arthropod diversity previous to the K/Pg event.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05596-2

By:

Vera, Ezequiel I.;
Monferran, Mateo D.;
Massaferro, Julieta;
Sabater, Lara M.;
Gallego, Oscar F.;
Perez Loinaze, Valeria S.;
Moyano-Paz, Damián;
Agnolín, Federico L.;
Manabe, Makoto;
Tsuhiji, Takanobu;
Novas, Fernando E.

Publication type:

Article

Post-crotonylation oxidation by a monooxygenase promotes acetyl-CoA synthetase degradation in Streptomyces roseosporus.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05633-0

By:

Ma, Bing-Bing;
Sun, Chen-Fan;
Zhou, Jing-Yi;
Gu, Shuai-Lei;
Dai, Xin-Yi;
Chen, Yan-Zhen;
Zhao, Qing-Wei;
Mao, Xu-Ming

Publication type:

Article

Transcranial photobiomodulation improves insulin therapy in diabetic microglial reactivity and the brain drainage system.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05630-3

By:

Liu, Shaojun;
Li, Dongyu;
Yu, Tingting;
Zhu, Jingtan;
Semyachkina-Glushkovskaya, Oxana;
Zhu, Dan

Publication type:

Article

The MetaInvert soil invertebrate genome resource provides insights into below-ground biodiversity and evolution.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05621-4

By:

Collins, Gemma;
Schneider, Clément;
Boštjančić, Ljudevit Luka;
Burkhardt, Ulrich;
Christian, Axel;
Decker, Peter;
Ebersberger, Ingo;
Hohberg, Karin;
Lecompte, Odile;
Merges, Dominik;
Muelbaier, Hannah;
Romahn, Juliane;
Römbke, Jörg;
Rutz, Christelle;
Schmelz, Rüdiger;
Schmidt, Alexandra;
Theissinger, Kathrin;
Veres, Robert;
Lehmitz, Ricarda;
Pfenninger, Markus

Publication type:

Article

CRISPRi gene modulation and all-optical electrophysiology in post-differentiated human iPSC-cardiomyocytes.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05627-y

By:

Han, Julie L.;
Heinson, Yuli W.;
Chua, Christianne J.;
Liu, Wei;
Entcheva, Emilia

Publication type:

Article

Cortical time-course of evidence accumulation during semantic processing.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05611-6

By:

Ghazaryan, Gayane;
van Vliet, Marijn;
Lammi, Lotta;
Lindh-Knuutila, Tiina;
Kivisaari, Sasa;
Hultén, Annika;
Salmelin, Riitta

Publication type:

Article

Downregulation of mitochondrial metabolism is a driver for fast skeletal muscle loss during mouse aging.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05595-3

By:

Fernando, Raquel;
Shindyapina, Anastasia V.;
Ost, Mario;
Santesmasses, Didac;
Hu, Yan;
Tyshkovskiy, Alexander;
Yim, Sun Hee;
Weiss, Jürgen;
Gladyshev, Vadim N.;
Grune, Tilman;
Castro, José Pedro

Publication type:

Article