Works matching IS 23968923 AND DT 2024 AND VI 9 AND IP 1

Results: 94

An efficient injection protocol for Drosophila larvae.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae093

By:

Soltani, Sattar;
Huynh, Nhan;
King-Jones, Kirst

Publication type:

Article

A cognitive and sensory approach based on workshops using the zebrafish model promotes the discovery of life sciences in the classroom.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae092

By:

Bourcier, Laure M;
Babin, Patrick J

Publication type:

Article

Protocol for obtaining doubled haploids in isolated microspore culture in vitro for poorly responsive genotypes of brassicaceae family.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae091

By:

Kozar, Elena V;
Domblides, Elena A

Publication type:

Article

Development of a large-scale rapid LAMP diagnostic testing platform for pandemic preparedness and outbreak response.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae090

By:

Beuningen, Rinie van;
Jim, Kin Ki;
Boot, Maikel;
Ossendrijver, Michel;
Keijser, Bart J F;
Bovenkamp, Jeroen H B van de;
Melchers, Willem J G;
Kievits, Tim

Publication type:

Article

iHDSel software: The price equation and the population stability index to detect genomic patterns compatible with selective sweeps. An example with SARS-CoV-2.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae089

By:

Carvajal-Rodríguez, Antonio

Publication type:

Article

Development of a new breath collection method for analyzing volatile organic compounds from intubated mouse models.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae087

By:

Taylor, Alastair;
Blum, Sylvia;
Ball, Madeleine;
Birch, Owen;
Chou, Hsuan;
Greenwood, Julia;
Swann, Shane;
Pocock, Lara;
Allsworth, Max;
Boyle, Billy;
Geillinger-Kaestle, Kerstin

Publication type:

Article

Correction to: Heterozygous KCNH2 variant phenotyping using Flp-In HEK293 and high-throughput automated patch clamp electrophysiology.

Published in:: 2024
Publication type:: Correction Notice

Spontaneous breaking of symmetry in overlapping cell instance segmentation using diffusion models.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae084

By:

Kirkegaard, Julius B

Publication type:

Article

Enhancing negative control selection: A comparative analysis of random and targeted sampling techniques for obtaining High-Quality RNA from normal breast tissue.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae083

By:

Mehta, Komal;
Sharma, Archana;
Mehta, Anurag;
Tayal, Juhi

Publication type:

Article

Efficient protocol for isolating human fibroblast from primary skin cell cultures: application to keloid, hypertrophic scar, and normal skin biopsies.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae082

By:

Ningsih, Sri Suciati;
Jusman, Sri Widia A;
Syaidah, Rahimi;
Nauli, Raisa;
Fadilah, Fadilah

Publication type:

Article

Practical application of PMA–qPCR assay for determination of viable cells of inter-species biofilm of Candida albicans–Staphylococcus aureus.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae081

By:

Kendra, Samuel;
Varga, Jarmila Czucz;
Gaálová-Radochová, Barbora;
Bujdáková, Helena

Publication type:

Article

Deep learning and transfer learning for brain tumor detection and classification.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae080

By:

Rustom, Faris;
Moroze, Ezekiel;
Parva, Pedram;
Ogmen, Haluk;
Yazdanbakhsh, Arash

Publication type:

Article

A rapid and inexpensive 96-well DNA-extraction method from blood using silicon dioxide powder (Glassmilk).

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae079

By:

Bonilla, Maria Mercedes Vásquez;
Guerrero-Freire, Mónica Salome;
Ledesma, Yanua;
Laglaguano, Juan Carlos;
Waard, Jacobus H de

Publication type:

Article

Modified throughput ninhydrin method for the qualitative assessment of dietary protein absorption in pig plasma.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae078

By:

Pierzynowska, Kateryna;
Zaworski, Kamil;
Wychowański, Piotr;
Donaldson, Janine;
Woliński, Jarosław;
Borowitz, Drucy;
Gallotto, Robert;
Pierzynowski, Stefan

Publication type:

Article

Optimizing Western blotting immunodetection: Streamlining antibody cocktails for reduced protocol time and enhanced multiplexing applications.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae077

By:

Yamani, L Z;
Alsamman, Khaldoon;
El-Masry, Omar S

Publication type:

Article

Cluster analysis identifies long COVID subtypes in Belgian patients.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae076

By:

Kemajou, Pamela Mfouth;
Besse-Hammer, Tatiana;
Lebouc, Claire;
Coppieters, Yves

Publication type:

Article

Live cell fluorescence microscopy—an end-to-end workflow for high-throughput image and data analysis.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae075

By:

Zahumensky, Jakub;
Malinsky, Jan

Publication type:

Article

SMaRT M-Seq: an optimized step-by-step protocol for M protein sequencing in monoclonal gammopathies.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae074

By:

Nevone, Alice;
Lattarulo, Francesca;
Russo, Monica;
Cascino, Pasquale;
Merlini, Giampaolo;
Palladini, Giovanni;
Nuvolone, Mario

Publication type:

Article

A reproducible method to study traumatic injury-induced zebrafish brain regeneration.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae073

By:

Srivastava, Priyanka P;
Bhasin, Sidharth;
Shankaran, Sunita S;
Roger, Catherine;
Ramachandran, Rajesh;
Minocha, Shilpi

Publication type:

Article

Unpacking unstructured data: A pilot study on extracting insights from neuropathological reports of Parkinson's Disease patients using large language models.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae072

By:

Stroganov, Oleg;
Schedlbauer, Amber;
Lorenzen, Emily;
Kadhim, Alex;
Lobanova, Anna;
Lewis, David A;
Glausier, Jill R

Publication type:

Article

Oligoribonucleotide interference-PCR-based methods for the sensitive and accurate detection of KRAS mutations.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae071

By:

Fujita, Hiroaki;
Fujita, Toshitsugu;
Ishido, Keinosuke;
Hakamada, Kenichi;
Fujii, Hodaka

Publication type:

Article

Digital approaches in post-COVID healthcare: a systematic review of technological innovations in disease management.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae070

By:

Kemajou, Pamela Mfouth;
Mbanya, Armand;
Coppieters, Yves

Publication type:

Article

A new method for quantifying glyoxalase II activity in biological samples.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae069

By:

Kadhum, Mohammed Alaa;
Hadwan, Mahmoud Hussein

Publication type:

Article

Optimization and application of digital droplet PCR for the detection of SARS-CoV-2 in saliva specimen using commercially available kit.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae068

By:

Kaisar, Maria M M;
Kristin, Helen;
Wijaya, Fajar A;
Rachel, Clarissa;
Anggraini, Felicia;
Ali, Soegianto

Publication type:

Article

An efficient protocol for the extraction of pigment-free active polyphenol oxidase and soluble proteins from plant cells.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae067

By:

Yuzuak, Seyit;
Xie, De-Yu

Publication type:

Article

A modified dual preparatory method for improved isolation of nucleic acids from laser microdissected fresh-frozen human cancer tissue specimens.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae066

By:

Kimble, Danielle C;
Litzi, Tracy J;
Snyder, Gabrielle;
Olowu, Victoria;
TaQee, Sakiyah;
Conrads, Kelly A;
Loffredo, Jeremy;
Bateman, Nicholas W;
Alba, Camille;
Rice, Elizabeth;
Shriver, Craig D;
Maxwell, George L;
Dalgard, Clifton;
Conrads, Thomas P

Publication type:

Article

Graph neural networks are promising for phenotypic virtual screening on cancer cell lines.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae065

By:

Vishwakarma, Sachin;
Hernandez-Hernandez, Saiveth;
Ballester, Pedro J

Publication type:

Article

Development and characterization of human T-cell receptor (TCR) alpha and beta clones' library as biological standards and resources for TCR sequencing and engineering.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae064

By:

Wei, Yu-Chun;
Pospiech, Mateusz;
Meng, Yiting;
Alachkar, Houda

Publication type:

Article

Deep learning image analysis for filamentous fungi taxonomic classification: Dealing with small datasets with class imbalance and hierarchical grouping.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae063

By:

Stiller, Stefan;
Dueñas, Juan F;
Hempel, Stefan;
Rillig, Matthias C;
Ryo, Masahiro

Publication type:

Article

Advanced image generation for cancer using diffusion models.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae062

By:

Kidder, Benjamin L

Publication type:

Article

DLKcat cannot predict meaningful kcat values for mutants and unfamiliar enzymes.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae061

By:

Kroll, Alexander;
Lercher, Martin J

Publication type:

Article

Methods in cancer research: Assessing therapy response of spheroid cultures by life cell imaging using a cost-effective live-dead staining protocol.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae060

By:

Phour, Jaison;
Vassella, Erik

Publication type:

Article

Generating CRISPR-edited clonal lines of cultured Drosophila S2 cells.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae059

By:

Ryniawec, John M;
Amoiroglou, Anastasia;
Rogers, Gregory C

Publication type:

Article

Advancing age grading techniques for Glossina morsitans morsitans, vectors of African trypanosomiasis, through mid-infrared spectroscopy and machine learning.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae058

By:

Pazmiño-Betancourth, Mauro;
Gómez-Uribarri, Ivan Casas;
Mondragon-Shem, Karina;
Babayan, Simon A;
Baldini, Francesco;
Haines, Lee Rafuse

Publication type:

Article

NanoMGT: Marker gene typing of low complexity mono-species metagenomic samples using noisy long reads.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae057

By:

Hallgren, Malte B;
Clausen, Philip T L C;
Aarestrup, Frank M

Publication type:

Article

Automatic detection of fish scale circuli using deep learning.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae056

By:

Hanson, Nora N;
Ounsley, James P;
Henry, Jason;
Terzić, Kasim;
Caneco, Bruno

Publication type:

Article

Harmonizing immune cell sequences for computational analysis with large language models.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae055

By:

Alsaafin, Areej;
Tizhoosh, Hamid R

Publication type:

Article

Simple protocol for combined extraction of exocrine secretions and RNA in small arthropods.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae054

By:

Fröhlich, David;
Bodner, Michaela;
Raspotnig, Günther;
Hahn, Christoph

Publication type:

Article

Assessing RNA integrity by digital RT-PCR: Influence of extraction, storage, and matrices.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae053

By:

Wurtzer, Sebastien;
Duvivier, Mathilde;
Accrombessi, Heberte;
Levert, Morgane;
Richard, Elise;
Moulin, Laurent

Publication type:

Article

Deep learning pipeline reveals key moments in human embryonic development predictive of live birth after in vitro fertilization.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae052

By:

Mapstone, Camilla;
Hunter, Helen;
Brison, Daniel;
Handl, Julia;
Plusa, Berenika

Publication type:

Article

Circular PCR as an efficient and precise umbrella of methods for the generation of circular dsDNA with staggered nicks: Mechanism and types.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae051

By:

Ferro-Gallego, Pedro;
Vila-Sanjurjo, Antón;
Pereira, Andrea Katherine Valderrama;
Pérez, Gonzalo Porres;
Domínguez-Gerpe, Lourdes

Publication type:

Article

Molecular identification of polymorphic transposable elements in populations of the invasive ant Cardiocondyla obscurior.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae050

By:

van den Bos, Esther;
Gadau, Jürgen;
Schrader, Lukas

Publication type:

Article

The use of droplet-based microfluidic technologies for accelerated selection of Yarrowia lipolytica and Phaffia rhodozyma yeast mutants.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae049

By:

Mika, Taras;
Kalnins, Martins;
Spalvins, Kriss

Publication type:

Article

Machine learning of cellular metabolic rewiring.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae048

By:

Xavier, Joao B

Publication type:

Article

The landscape of RNA 3D structure modeling with transformer networks.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae047

By:

Tarafder, Sumit;
Roche, Rahmatullah;
Bhattacharya, Debswapna

Publication type:

Article

KCL TEST: an open-source inspired asymptomatic SARS-CoV-2 surveillance programme in an academic institution.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae046

By:

Andrade, Joana Reis de;
Scourfield, Edward;
Peswani-Sajnani, Shilpa Lekhraj;
Poulton, Kate;
Rees, Thomas ap;
Khooshemehri, Paniz;
Doherty, George;
Ong, Stephanie;
Ivan, Iustina-Francisca;
Goudarzi, Negin;
Gardiner, Isaac;
Caine, Estelle;
Maguire, Thomas J A;
Leightley, Daniel;
Torrico, Luis;
Gasulla, Alex;
Menendez-Vazquez, Angel;
Ortega-Prieto, Ana Maria;
Pickering, Suzanne;
Jimenez-Guardeño, Jose M

Publication type:

Article

A protocol to isolate, identify, and verify glucose- or carbohydrate-binding receptors.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae045

By:

Rashid, Nadia;
Chhabra, Kavaljit H

Publication type:

Article

High-throughput evaluation of hemolytic activity through precise measurement of colony and hemolytic zone sizes of engineered Bacillus subtilis on blood agar.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae044

By:

Bamba, Takahiro;
Aoki, Rina;
Hori, Yoshimi;
Ishikawa, Shu;
Yoshida, Ken-ichi;
Taoka, Naoaki;
Kobayashi, Shingo;
Yasueda, Hisashi;
Kondo, Akihiko;
Hasunuma, Tomohisa

Publication type:

Article

Multimodal pretraining for unsupervised protein representation learning.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae043

By:

Nguyen, Viet Thanh Duy;
Hy, Truong Son

Publication type:

Article

Implementation of plate reader-based indooxine and Nessler protocols for monitoring L-asparaginase serum activity in childhood acute lymphoblastic leukaemia.

Published in:

Biology Methods & Protocols, 2024, v. 9, n. 1, p. 1, doi. 10.1093/biomethods/bpae042

By:

Vergov, Bozhidar;
Sbirkov, Yordan;
Minchev, Danail;
Todorova, Tatyana;
Baldzhieva, Alexandra;
Burnusuzov, Hasan;
Spasova, Мariya I;
Sarafian, Victoria

Publication type:

Article