Works matching IS 21601836 AND DT 2023 AND VI 13 AND IP 10

Results: 41

Correction to: Identification of the Teopod1, Teopod2, and Early Phase Change genes in maize.

Published in:: G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad213
Publication type:: Article

Retraction and replacement: Stripes and loss of color in ball pythons (Python regius) are associated with variants affecting endothelin signaling.

Published in:: G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad211
Publication type:: Article

Detection of locally adapted genomic regions in wild rice (Oryza rufipogon) using environmental association analysis.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad194

By:

Bedford, James A.;
Carine, Mark;
Chapman, Mark A.

Publication type:

Article

Genome assembly of the foot-flagging frog, Staurois parvus: a resource for understanding mechanisms of behavior.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad193

By:

Holtz, Mika A.;
Racicot, Riccardo;
Preininger, Doris;
Stuckert, Adam M. M.;
Mangiamele, Lisa A.

Publication type:

Article

Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae).

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad192

By:

Steffen, Karin;
Proux-Wéra, Estelle;
Soler, Lucile;
Churcher, Allison;
Sundh, John;
Cárdenas, Paco

Publication type:

Article

Long-read genome assemblies for the study of chromosome expansion: Drosophila kikkawai, Drosophila takahashii, Drosophila bipectinata, and Drosophila ananassae.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad191

By:

Leung, Wilson;
Torosin, Nicole;
Weihuan Cao;
Reed, Laura K.;
Arrigo, Cindy;
Elgin, Sarah C. R.;
Ellison, Christopher E.

Publication type:

Article

Reference genomes for BALB/c Nude and NOD/SCID mouse models.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad188

By:

Schmid-Siegert, Emanuel;
Mengting Qin;
Huan Tian;
Arpat, Bulak;
Chen, Bonnie;
Xenarios, Ioannis

Publication type:

Article

Probing the physiological role of the plastid outer-envelope membrane using the oemiR plasmid collection.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad187

By:

Schwenkert, Serena;
Wing Tung Lo;
Szulc, Beata;
Chun Kwan Yip;
Pratt, Anna I.;
Cusack, Siobhan A.;
Brandt, Benjamin;
Leister, Dario;
Kunz, Hans-Henning

Publication type:

Article

Identification of a spontaneously arising variant affecting thermotaxis behavior in a recombinant inbred Caenorhabditis elegans line.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad186

By:

Jihye Yeon;
Porwal, Charmi;
McGrath, Patrick T.;
Sengupta, Piali

Publication type:

Article

Near chromosome-level genome assembly of the microsporidium Hamiltosporidium tvaerminnensis.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad185

By:

Angst, Pascal;
Pombert, Jean-François;
Ebert, Dieter;
Fields, Peter D.

Publication type:

Article

An expanded GCaMP reporter toolkit for functional imaging in Caenorhabditis elegans.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad183

By:

Ding, Jimmy;
Peng, Lucinda;
Sihoon Moon;
Hyun Jee Lee;
Patel, Dhaval S.;
Hang Lu

Publication type:

Article

Expression of Concern: Stripes and loss of color in ball pythons (Python regius) are associated with variants affecting endothelin signaling.

Published in:: G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad182
Publication type:: Article

De novo genome assembly and comparative genomics for the colonial ascidian Botrylloides violaceus.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad181

By:

Sumner, Jack T.;
Andrasz, Cassidy L.;
Johnson, Christine A.;
Wax, Sarah;
Anderson, Paul;
Keeling, Elena L.;
Davidson, Jean M.

Publication type:

Article

Phenotypic defects from the expression of wild-type and pathogenic TATA-binding proteins in new Drosophila models of Spinocerebellar Ataxia Type 17.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad180

By:

Patel, Nikhil;
Alam, Nadir;
Libohova, Kozeta;
Dulay, Ryan;
Todi, Sokol V.;
Sujkowski, Alyson

Publication type:

Article

Identification of the Teopod1, Teopod2, and Early Phase Change genes in maize.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad179

By:

Sauer, Matt;
Jianfei Zhao;
Meeyeon Park;
Khangura, Rajdeep S.;
Dilkes, Brian P.;
Poethig, R. Scott

Publication type:

Article

Cellular heterogeneity of the developing worker honey bee (Apis mellifera) pupa: a single cell transcriptomics analysis.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad178

By:

Patir, Anirudh;
Raper, Anna;
Fleming, Robert;
Henderson, Beth E. P.;
Murphy, Lee;
Henderson, Neil C.;
Clark, Emily L.;
Freeman, Tom C.;
Barnett, Mark W.

Publication type:

Article

Genome Report: chromosome-scale genome assembly of the African spiny mouse (Acomys cahirinus).

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad177

By:

Nguyen, Elizabeth Dong;
Fard, Vahid Nikoonejad;
Kim, Bernard Y.;
Collins, Sarah;
Galey, Miranda;
Nelson, Branden R.;
Wakenight, Paul;
Gable, Simone M.;
McKenna, Aaron;
Bammler, Theo K.;
MacDonald, Jim;
Okamura, Daryl M.;
Shendure, Jay;
Beier, David R.;
Ramirez, Jan Marino;
Majesky, Mark W.;
Millen, Kathleen J.;
Tollis, Marc;
Miller, Danny E.

Publication type:

Article

VExD: a curated resource for human gene expression alterations following viral infection.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad176

By:

Dexheimer, Phillip J.;
Pujato, Mario;
Roskin, Krishna M.;
Weirauch, Matthew T.

Publication type:

Article

A GFP splicing reporter in a coilin mutant background reveals links between alternative splicing, siRNAs, and coilin function in Arabidopsis thaliana.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad175

By:

Tatsuo Kanno;
Chiou, Phebe;
Ming-Tsung Wu;
Wen-Dar Lin;
Matzke, Antonius;
Matzke, Marjori

Publication type:

Article

Genome-wide association analysis identifies natural allelic variants associated with panicle architecture variation in African rice, Oryza glaberrima Steud.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad174

By:

Ntakirutimana, Fabrice;
Tranchant-Dubreuil, Christine;
Cubry, Philippe;
Chougule, Kapeel;
Zhang, Jianwei;
Wing, Rod A.;
Adam, Hélène;
Lorieux, Mathias;
Jouannic, Stefan

Publication type:

Article

Interactions between the transcription factors FfmA and AtrR are required to properly regulate gene expression in the fungus Aspergillus fumigatus.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad173

By:

Paul, Sanjoy;
Stamnes, Mark A.;
Moye-Rowley, W. Scott

Publication type:

Article

Transcriptional regulation of the synthesis and secretion of farnesol in the fungus Candida albicans: examination of the Homann transcription regulator knockout collection.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad172

By:

Gutzmann, Daniel J.;
Kramer, Jaxon J.;
Toomey, Brigid M.;
Boone, Cory H. T.;
Atkin, Audrey L.;
Nickerson, Kenneth W.

Publication type:

Article

Chromosomal-level reference genome of a wild North American mallard (Anas platyrhynchos).

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad171

By:

Lavretsky, Philip;
Hernández, Flor;
Swale, Thomas;
Mohl, Jonathon E.

Publication type:

Article

A multiplexed plant-animal SNP array for selective breeding and species conservation applications.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad170

By:

Montanari, Sara;
Deng, Cecilia;
Koot, Emily;
Bassil, Nahla V.;
Zurn, Jason D.;
Morrison-Whittle, Peter;
Worthington, Margaret L.;
Aryal, Rishi;
Ashrafi, Hamid;
Pradelles, Julien;
Wellenreuther, Maren;
Chagné, David

Publication type:

Article

Concerning the eXclusion in human genomics: the choice of sex chromosome representation in the human genome drastically affects the number of identified variants.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad169

By:

Pinto, Brendan J.;
O'Connor, Brian;
Schatz, Michael C.;
Zarate, Samantha;
Wilson, Melissa A.

Publication type:

Article

Genetic variants in melanogenesis proteins TYRP1 and TYR are associated with the golden rhesus macaque phenotype.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad168

By:

Peterson, Samuel M.;
Watowich, Marina M.;
Renner, Lauren M.;
Martin, Samantha;
Offenberg, Emma;
Lea, Amanda;
Montague, Michael J.;
Higham, James P.;
Snyder-Mackler, Noah;
Neuringer, Martha;
Ferguson, Betsy

Publication type:

Article

RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad167

By:

Vijayraghavan, Sriram;
Kozmin, Stanislav G.;
Strope, Pooja K.;
Skelly, Daniel A.;
Magwene, Paul M.;
Dietrich, Fred S.;
McCusker, John H.

Publication type:

Article

Characterization of integration sites and transfer DNA structures in Agrobacterium-mediated transgenic events of maize inbred B104.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad166

By:

Neelakandan, Anjanasree K.;
Kabahuma, Mercy;
Qin Yang;
Lopez, Miriam;
Wisser, Randall J.;
Balint-Kurti, Peter;
Lauter, Nick

Publication type:

Article

Identity-by-descent-based estimation of the X chromosome effective population size with application to sex-specific demographic history.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad165

By:

Ruoyi Cai;
Browning, Brian L.;
Browning, Sharon R.

Publication type:

Article

A simulation study comparing advanced marker-assisted selection with genomic selection in tree breeding programs.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad164

By:

Degen, Bernd;
Müller, Niels A.

Publication type:

Article

FREQ-Seq²: a method for precise high-throughput combinatorial quantification of allele frequencies.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad162

By:

Roy Zhao;
Lukacsovich, Tamas;
Gaut, Rebecca;
Emerson, J. J.

Publication type:

Article

Power of neutrality tests for detecting natural selection.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad161

By:

Tomotaka Tanaka;
Toshiyuki Hayakawa;
Teshima, Kosuke M.

Publication type:

Article

Glyoxal as an alternative fixative for single-cell RNA sequencing.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad160

By:

Bageritz, Josephine;
Krausse, Niklas;
Yousefian, Schayan;
Leible, Svenja;
Valentini, Erica;
Boutros, Michael

Publication type:

Article

Gene-by-environment interactions influence the fitness cost of gene copy-number variation in yeast.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad159

By:

Robinson, DeElegant;
Vanacloig-Pedros, Elena;
Ruoyi Cai;
Place, Michael;
Hose, James;
Gasch, Audrey P.

Publication type:

Article

Comparative transcriptomics and gene expression divergence associated with homoploid hybrid speciation in Argyranthemum.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad158

By:

White, Oliver W.;
Reyes-Betancort, Alfredo;
Carine, Mark A.;
Chapman, Mark A.

Publication type:

Article

Chromosome-level reference genomes of two imperiled desert fishes: spikedace (Meda fulgida) and loach minnow (Tiaroga cobitis).

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad157

By:

Alexandre, Nicolas M.;
Cameron, Alexander C.;
Tian, David;
Chatla, Kamalakar;
Kolora, Sree R. R.;
Whiteman, Noah K.;
Turner, Thomas F.;
Reinthal, Peter N.

Publication type:

Article

Chromosome-level reference genome for North American bison (Bison bison) and variant database aids in identifying albino mutation.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad156

By:

Stroupe, Sam;
Martone, Carly;
McCann, Blake;
Juras, Rytis;
Kjöllerström, Helena Josefina;
Raudsepp, Terje;
Beard, Donald;
Davis, Brian W.;
Derr, James N.

Publication type:

Article

Demonstration of in vivo engineered tandem duplications of varying sizes using CRISPR and recombinases in Drosophila melanogaster.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad155

By:

Loehlin, David W.;
McClain, Georgia L.;
Manting Xu;
Kedia, Ria;
Root, Elise

Publication type:

Article

Systematic profiling of subtelomeric silencing factors in budding yeast.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad153

By:

Juárez-Reyes, Alejandro;
Avelar-Rivas, J. Abraham;
Hernandez-Valdes, Jhonatan A.;
Bo Hua;
Campos, Sergio E.;
González, James;
González, Alicia;
Springer, Michael;
Mancera, Eugenio;
DeLuna, Alexander

Publication type:

Article

An approach for prioritizing candidate genes from RNA-seq using preclinical cocaine self-administration datasets as a test case.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad143

By:

Vannan, Annika;
Dell'Orco, Michela;
Perrone-Bizzozero, Nora I.;
Neisewander, Janet L.;
Wilson, Melissa A.

Publication type:

Article

A chromosome scale assembly of the parasitoid wasp Venturia canescens provides insight into the process of virus domestication.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad137

By:

Meng Mao;
Simmonds, Tyler J.;
Stouthamer, Corinne M.;
Kehoe, Tara M.;
Geib, Scott M.;
Burke, Gaelen R.

Publication type:

Article