Works matching IS 20571577 AND DT 2020 AND VI 6 AND IP 1

Results: 42

A new lineage of segmented RNA viruses infecting animals.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/vez061

By:

Obbard, Darren J;
Shi, Mang;
Roberts, Katherine E;
Longdon, Ben;
Dennis, Alice B

Publication type:

Article

Wide spectrum and high frequency of genomic structural variation, including transposable elements, in large double-stranded DNA viruses.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/vez060

By:

Loiseau, Vincent;
Herniou, Elisabeth A;
Moreau, Yannis;
Lévêque, Nicolas;
Meignin, Carine;
Daeffler, Laurent;
Federici, Brian;
Cordaux, Richard;
Gilbert, Clément

Publication type:

Article

Frequent cross-species transmissions of foamy virus between domestic and wild felids.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/vez058

By:

Kraberger, Simona;
Fountain-Jones, Nicholas M;
Gagne, Roderick B;
Malmberg, Jennifer;
Dannemiller, Nicholas G;
Logan, Ken;
Alldredge, Mat;
Varsani, Arvind;
Crooks, Kevin R;
Craft, Meggan;
Carver, Scott;
VandeWoude, Sue

Publication type:

Article

Intragenic recombination influences rotavirus diversity and evolution.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/vez059

By:

Hoxie, Irene;
Dennehy, John J

Publication type:

Article

Avian and serpentine endogenous foamy viruses, and new insights into the macroevolutionary history of foamy viruses.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/vez057

By:

Aiewsakun, Pakorn

Publication type:

Article

Papillomaviruses infecting cetaceans exhibit signs of genome adaptation following a recombination event.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa038

By:

Borvető, Fanni;
Bravo, Ignacio G;
Willemsen, Anouk

Publication type:

Article

Co-circulation of both low and highly pathogenic avian influenza H5 viruses in current poultry epidemics in Taiwan.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa037

By:

Li, Yao-Tsun;
Chen, Chen-Chih;
Chang, Ai-Mei;
Chao, Day-Yu;
Smith, Gavin J D

Publication type:

Article

The characterization of two novel neotropical primate papillomaviruses supports the ancient within-species diversity model.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa036

By:

D'arc, Mirela;
Moreira, Filipe R R;
Dias, Cecilia A;
Souza, Antonizete R;
Seuánez, Héctor N;
Soares, Marcelo A;
Tavares, Maria C H;
Santos, André F A

Publication type:

Article

Evolutionary analysis of exogenous and integrated HHV-6A/HHV-6B populations.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa035

By:

Forni, Diego;
Cagliani, Rachele;
Clerici, Mario;
Pozzoli, Uberto;
Sironi, Manuela

Publication type:

Article

No evidence for distinct types in the evolution of SARS-CoV-2.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa034

By:

MacLean, Oscar A;
Orton, Richard J;
Singer, Joshua B;
Robertson, David L

Publication type:

Article

Multivariate analyses of codon usage of SARS-CoV-2 and other betacoronaviruses.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa032

By:

Gu, Haogao;
Chu, Daniel K W;
Peiris, Malik;
Poon, Leo L M

Publication type:

Article

Transmission and evolutionary dynamics of human coronavirus OC43 strains in coastal Kenya investigated by partial spike sequence analysis, 2015–16.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa031

By:

Abidha, Carol A;
Nyiro, Joyce;
Kamau, Everlyn;
Abdullahi, Osman;
Nokes, David James;
Agoti, Charles N

Publication type:

Article

UPΦ phages, a new group of filamentous phages found in several members of Enterobacteriales.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa030

By:

Shapiro, Jason W;
Putonti, Catherine

Publication type:

Article

Tracking echovirus eleven outbreaks in Guangdong, China: a metatranscriptomic, phylogenetic, and epidemiological study.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa029

By:

Lu, Jing;
Kang, Min;
Zeng, Hanri;
Zhong, Yuwen;
Fang, Ling;
Zheng, Xiaoling;
Liu, Leng;
Yi, Lina;
Lin, Huifang;
Peng, Jingju;
Li, Caixia;
Zhang, Yingtao;
Sun, Limei;
Luo, Shuhua;
Xiao, Jianpeng;
Munnink, Bas B Oude;
Koopmans, Marion P G;
Wu, Jie;
Zhang, Yong;
Zhang, Yonghui

Publication type:

Article

Intrinsically disordered regions are abundant in simplexvirus proteomes and display signatures of positive selection.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa028

By:

Mozzi, Alessandra;
Forni, Diego;
Cagliani, Rachele;
Clerici, Mario;
Pozzoli, Uberto;
Sironi, Manuela

Publication type:

Article

An emergent clade of SARS-CoV-2 linked to returned travellers from Iran.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa027

By:

Eden, John-Sebastian;
Rockett, Rebecca;
Carter, Ian;
Rahman, Hossinur;
Ligt, Joep de;
Hadfield, James;
Storey, Matthew;
Ren, Xiaoyun;
Tulloch, Rachel;
Basile, Kerri;
Wells, Jessica;
Byun, Roy;
Gilroy, Nicky;
O'Sullivan, Matthew V;
Sintchenko, Vitali;
Chen, Sharon C;
Maddocks, Susan;
Sorrell, Tania C;
Holmes, Edward C;
Dwyer, Dominic E

Publication type:

Article

Origin and evolution of dengue virus type 2 causing outbreaks in Kenya: Evidence of circulation of two cosmopolitan genotype lineages.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa026

By:

Langat, Solomon K;
Eyase, Fredrick Lunyagi;
Berry, Irina Maljkovic;
Nyunja, Albert;
Bulimo, Wallace;
Owaka, Samuel;
Ofula, Victor;
Limbaso, Samson;
Lutomiah, Joel;
Jarman, Richard;
Distelhorst, John;
Sang, Rosemary C

Publication type:

Article

The dynamics of molecular evolution of emerging avian reoviruses through accumulation of point mutations and genetic re-assortment.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa025

By:

Ayalew, Lisanework E;
Ahmed, Khawaja Ashfaque;
Mekuria, Zelalem H;
Lockerbie, Betty;
Popowich, Shelly;
Tikoo, Suresh K;
Ojkic, Davor;
Gomis, Susantha

Publication type:

Article

Opportunistic sampling of wild native and invasive birds reveals a rich diversity of adenoviruses in Australia.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa024

By:

Vaz, Frederico F;
Raso, Tânia F;
Agius, Jessica E;
Hunt, Tony;
Leishman, Alan;
Eden, John-Sebastian;
Phalen, David N

Publication type:

Article

Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa023

By:

Wang, Fengbin;
Baquero, Diana P;
Su, Zhangli;
Osinski, Tomasz;
Prangishvili, David;
Egelman, Edward H;
Krupovic, Mart

Publication type:

Article

Modeling multipartite virus evolution: the genome formula facilitates rapid adaptation to heterogeneous environments<sup>†</sup>.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa022

By:

Zwart, Mark P;
Elena, Santiago F

Publication type:

Article

New hemagglutinin dual-receptor-binding pattern of a human-infecting influenza A (H7N9) virus isolated after fifth epidemic wave.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa021

By:

Guo, Lei;
Li, Nan;
Li, Wenlong;
Zhou, Jienan;
Ning, Ruotong;
Hou, Min;
Liu, Longding

Publication type:

Article

Newly identified viral genomes in pangolins with fatal disease.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa020

By:

Gao, Wen-Hua;
Lin, Xian-Dan;
Chen, Yan-Mei;
Xie, Chun-Gang;
Tan, Zhi-Zhou;
Zhou, Jia-Jun;
Chen, Shuai;
Holmes, Edward C;
Zhang, Yong-Zhen

Publication type:

Article

Novel genome sequences of cell-fusing agent virus allow comparison of virus phylogeny with the genetic structure of Aedes aegypti populations.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa018

By:

Baidaliuk, Artem;
Lequime, Sébastian;
Moltini-Conclois, Isabelle;
Dabo, Stéphanie;
Dickson, Laura B;
Prot, Matthieu;
Duong, Veasna;
Dussart, Philippe;
Boyer, Sébastien;
Shi, Chenyan;
Matthijnssens, Jelle;
Guglielmini, Julien;
Gloria‐Soria, Andrea;
Simon-Lorière, Etienne;
Lambrechts, Louis

Publication type:

Article

The temporal RNA virome patterns of a lesser dawn bat (Eonycteris spelaea) colony revealed by deep sequencing.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa017

By:

Paskey, Adrian C;
Ng, Justin H J;
Rice, Gregory K;
Chia, Wan Ni;
Philipson, Casandra W;
Foo, Randy J H;
Cer, Regina Z;
Long, Kyle A;
Lueder, Matthew R;
Frey, Kenneth G;
Hamilton, Theron;
Mendenhall, Ian H;
Smith, Gavin J;
Wang, Lin-Fa;
Bishop-Lilly, Kimberly A

Publication type:

Article

Trade-offs between host tolerances to different pathogens in plant–virus interactions.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa019

By:

Montes, Nuria;
Vijayan, Viji;
Pagán, Israel

Publication type:

Article

Detection of H3N8 influenza A virus with multiple mammalian-adaptive mutations in a rescued Grey seal (Halichoerus grypus) pup.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa016

By:

Venkatesh, Divya;
Bianco, Carlo;
Núñez, Alejandro;
Collins, Rachael;
Thorpe, Darryl;
Reid, Scott M;
Brookes, Sharon M;
Essen, Steve;
McGinn, Natalie;
Seekings, James;
Cooper, Jayne;
Brown, Ian H;
Lewis, Nicola S

Publication type:

Article

Avian and serpentine endogenous foamy viruses, and new insights into the macroevolutionary history of foamy viruses.

Published in:

2020

By:

Aiewsakun, Pakorn

Publication type:

Correction Notice

Mutations in the coat protein of a begomovirus result in altered transmission by different species of whitefly vectors.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa014

By:

Pan, Li-Long;
Chi, Yao;
Liu, Chao;
Fan, Yun-Yun;
Liu, Shu-Sheng

Publication type:

Article

In vitro evolution of herpes simplex virus 1 (HSV-1) reveals selection for syncytia and other minor variants in cell culture.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa013

By:

Kuny, Chad V;
Bowen, Christopher D;
Renner, Daniel W;
Johnston, Christine M;
Szpara, Moriah L

Publication type:

Article

Whole genome sequencing of Herpes Simplex Virus 1 directly from human cerebrospinal fluid reveals selective constraints in neurotropic viruses.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa012

By:

Lassalle, Florent;
Beale, Mathew A;
Bharucha, Tehmina;
Williams, Charlotte A;
Williams, Rachel J;
Cudini, Juliana;
Goldstein, Richard;
Haque, Tanzina;
Depledge, Daniel P;
Breuer, Judith

Publication type:

Article

Public health in genetic spaces: a statistical framework to optimize cluster-based outbreak detection.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa011

By:

Chato, Connor;
Kalish, Marcia L;
Poon, Art F Y

Publication type:

Article

Linking influenza virus evolution within and between human hosts.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa010

By:

Xue, Katherine S;
Bloom, Jesse D

Publication type:

Article

Properties and abundance of overlapping genes in viruses.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa009

By:

Schlub, Timothy E;
Holmes, Edward C

Publication type:

Article

Molecular fossils reveal ancient associations of dsDNA viruses with several phyla of fungi.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa008

By:

Gong, Zhen;
Zhang, Yu;
Han, Guan-Zhu

Publication type:

Article

A case for a negative-strand coding sequence in a group of positive-sense RNA viruses.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa007

By:

Dinan, Adam M;
Lukhovitskaya, Nina I;
Olendraite, Ingrida;
Firth, Andrew E

Publication type:

Article

Coevolution analysis of amino-acids reveals diversified drug-resistance solutions in viral sequences: a case study of hepatitis B virus.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa006

By:

Teppa, Elin;
Nadalin, Francesca;
Combet, Christophe;
Zea, Diego Javier;
David, Laurent;
Carbone, Alessandra

Publication type:

Article

Phyloanatomic characterization of the distinct T cell and monocyte contributions to the peripheral blood HIV population within the host.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa005

By:

RifeMagalis, Brittany;
Strickland, Samantha L;
Shank, Stephen D;
Autissier, Patrick;
Schuetz, Alexandra;
Sithinamsuwan, Pasiri;
Lerdlum, Sukalaya;
Fletcher, James L K;
Souza, Mark de;
Ananworanich, Jintanat;
Valcour, Victor;
Group, The Search007 Study;
Williams, Kenneth C;
Pond, Sergei L Kosakovsky;
RattoKim, Silvia;
Salemi, Marco

Publication type:

Article

Pervasive and non-random recombination in near full-length HIV genomes from Uganda.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa004

By:

Grant, Heather E;
Hodcroft, Emma B;
Ssemwanga, Deogratius;
Kitayimbwa, John M;
Yebra, Gonzalo;
Gomez, Luis Roger Esquivel;
Frampton, Dan;
Gall, Astrid;
Kellam, Paul;
Oliveira, Tulio de;
Bbosa, Nicholas;
Nsubuga, Rebecca N;
Kibengo, Freddie;
Kwan, Tsz Ho;
Lycett, Samantha;
Kao, Rowland;
Robertson, David L;
Ratmann, Oliver;
Fraser, Christophe;
Pillay, Deenan

Publication type:

Article

Unraveling virus relationships by structure-based phylogenetic classification.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa003

By:

Ng, Weng M;
Stelfox, Alice J;
Bowden, Thomas A

Publication type:

Article

On the stability of sequences inserted into viral genomes.

Published in:

2020

By:

Willemsen, Anouk;
Zwart, Mark P

Publication type:

Correction Notice

The evolution of protein domain repertoires: Shedding light on the origins of the Herpesviridae family.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa001

By:

Brito, Anderson F;
Pinney, John W

Publication type:

Article