Works matching IS 20571577 AND DT 2018 AND VI 4 AND IP 2

Results: 18

Tracking external introductions of HIV using phylodynamics reveals a major source of infections in rural KwaZulu-Natal, South Africa.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey037

By:

Rasmussen, David A;
Wilkinson, Eduan;
Vandormael, Alain;
Tanser, Frank;
Pillay, Deenan;
Stadler, Tanja;
Oliveira, Tulio de

Publication type:

Article

Identification and characterization of Coronaviridae genomes from Vietnamese bats and rats based on conserved protein domains.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey035

By:

Phan, My V T;
Tri, Tue Ngo;
Anh, Pham Hong;
Baker, Stephen;
Kellam, Paul;
Cotten, Matthew

Publication type:

Article

Ebola virus, but not Marburg virus, replicates efficiently and without required adaptation in snake cells.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey034

By:

Fedewa, Greg;
Radoshitzky, Sheli R;
Chī, Xiǎolì;
Dǒng, Lián;
Zeng, Xiankun;
Spear, Melissa;
Strauli, Nicolas;
Ng, Melinda;
Chandran, Kartik;
Stenglein, Mark D;
Hernandez, Ryan D;
Jahrling, Peter B;
Kuhn, Jens H;
DeRisi, Joseph L

Publication type:

Article

Modeling site-specific amino-acid preferences deepens phylogenetic estimates of viral sequence divergence.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey033

By:

Hilton, Sarah K;
Bloom, Jesse D

Publication type:

Article

Relational concurrency, stages of infection, and the evolution of HIV set point viral load.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey032

By:

Goodreau, Steven M;
Stansfield, Sarah E;
Murphy, James T;
Peebles, Kathryn C;
Gottlieb, Geoffrey S;
Abernethy, Neil F;
Herbeck, Joshua T;
Mittler, John E

Publication type:

Article

Hidden diversity and evolution of viruses in market fish.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey031

By:

Geoghegan, Jemma L;
Giallonardo, Francesca Di;
Cousins, Kate;
Shi, Mang;
Williamson, Jane E;
Holmes, Edward C

Publication type:

Article

Maintenance and reappearance of extremely divergent intra-host HIV-1 variants.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey030

By:

Wertheim, Joel O;
Oster, Alexandra M;
Murrell, Ben;
Saduvala, Neeraja;
Heneine, Walid;
Switzer, William M;
Johnson, Jeffrey A

Publication type:

Article

Estimating the mutational fitness effects distribution during early HIV infection.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey029

By:

Bons, Eva;
Bertels, Frederic;
Regoes, Roland R

Publication type:

Article

Beneficial coinfection can promote within-host viral diversity.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey028

By:

Leeks, Asher;
Segredo-Otero, Ernesto A;
Sanjuán, Rafael;
West, Stuart A

Publication type:

Article

Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey027

By:

Otieno, J R;
Kamau, E M;
Oketch, J W;
Ngoi, J M;
Gichuki, A M;
Binter, Š;
Otieno, G P;
Ngama, M;
Agoti, C N;
Cane, P A;
Kellam, P;
Cotten, M;
Lemey, P;
Nokes, D J

Publication type:

Article

Endogenous amdoparvovirus-related elements reveal insights into the biology and evolution of vertebrate parvoviruses.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey026

By:

Pénzes, Judit J;
Marsile-Medun, Soledad;
Agbandje-McKenna, Mavis;
Gifford, Robert James

Publication type:

Article

Where do all the subtypes go? Temporal dynamics of H8-H12 influenza A viruses in waterfowl.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey025

By:

Wille, Michelle;
Latorre-Margalef, Neus;
Tolf, Conny;
Halpin, Rebecca;
Wentworth, David;
Fouchier, Ron A M;
Raghwani, Jayna;
Pybus, Oliver G;
Olsen, Björn;
Waldenström, Jonas

Publication type:

Article

Low evolutionary rate of infectious pancreatic necrosis virus (IPNV) in Italy is associated with reduced virulence in trout.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey019

By:

Panzarin, Valentina;
Holmes, Edward C;
Abbadi, Miriam;
Zamperin, Gianpiero;
Quartesan, Rosita;
Milani, Adelaide;
Schivo, Alessia;
Bille, Laura;
Pozza, Manuela Dalla;
Monne, Isabella;
Toffan, Anna

Publication type:

Article

On the importance of negative controls in viral landscape phylogeography.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey023

By:

Dellicour, Simon;
Vrancken, Bram;
Trovão, Nídia S;
Fargette, Denis;
Lemey, Philippe

Publication type:

Article

Comparative genetic and genomic analysis of the novel fusellovirus Sulfolobus spindle-shaped virus 10.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey022

By:

Goodman, David A;
Stedman, Kenneth M

Publication type:

Article

Exploratory re-encoding of yellow fever virus genome: new insights for the design of live-attenuated viruses.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey021

By:

Klitting, R;
Riziki, T;
Moureau, G;
Piorkowski, G;
Gould, E A;
Lamballerie, X de

Publication type:

Article

A complex mosaic of enteroviruses shapes community-acquired hand, foot and mouth disease transmission and evolution within a single hospital.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey020

By:

Cobbin, Joanna C A;
Britton, Philip N;
Burrell, Rebecca;
Thosar, Deepali;
Selvakumar, Kierrtana;
Eden, John-Sebastian;
Jones, Cheryl A;
Holmes, Edward C

Publication type:

Article

Inferring the age difference in HIV transmission pairs by applying phylogenetic methods on the HIV transmission network of the Swiss HIV Cohort Study.

Published in:

Virus Evolution, 2018, v. 4, n. 2, p. 1, doi. 10.1093/ve/vey024

By:

Kusejko, Katharina;
Kadelka, Claus;
Marzel, Alex;
Battegay, Manuel;
Bernasconi, Enos;
Calmy, Alexandra;
Cavassini, Matthias;
Hoffmann, Matthias;
Böni, Jürg;
Yerly, Sabine;
Klimkait, Thomas;
Perreau, Matthieu;
Rauch, Andri;
Günthard, Huldrych F;
Kouyos, Roger D;
Study, Swiss HIV Cohort

Publication type:

Article