Works in eLife, 2024

Results: 1521

Ih block reveals separation of timescales in pyloric rhythm response to temperature changes in Cancer borealis.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.98844

By:

Schapiro, Kyra;
Rittenberg, J. D.;
Kenngott, Max;
Marder, Eve

Publication type:

Article

Light-driven synchronization of optogenetic clocks.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.97754

By:

Cristina Cannarsa, Maria;
Liguori, Filippo;
Pellicciotta, Nicola;
Frangipane, Giacomo;
Di Leonardo, Roberto

Publication type:

Article

A new potential strategy for cutaneous squamous cell carcinoma treatment by generating serum-based antibodies from tumor-exposed mice.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95678

By:

Zheng Liu

Publication type:

Article

Early steps of protein disaggregation by Hsp70 chaperone and class B J-domain proteins are shaped by Hsp110.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.94795

By:

Sztangierska, Wiktoria;
Wyszkowski, Hubert;
Pokornowska, Maria;
Kochanowicz, Klaudia;
Rychłowski, Michal;
Liberek, Krzysztof;
Kłosowska, Agnieszka

Publication type:

Article

Contrasting responses to aridity by different-sized decomposers cause similar decomposition rates across a precipitation gradient.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.93656

By:

Torsekar, Viraj R.;
Sagi, Nevo;
Daniel, J. Alfred;
Hawlena, Yael;
Gavish-Regev, Efrat;
Hawlena, Dror

Publication type:

Article

Heat Shock Factor 1 forms nuclear condensates and restructures the yeast genome before activating target genes.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.92464

By:

Rubio, Linda S.;
Mohajan, Suman;
Gross, David S.

Publication type:

Article

TRPML1 gating modulation by allosteric mutations and lipids.

Published in:

eLife, 2024, p. 1

By:

Ninghai Gan;
Yan Han;
Weizhong Zeng;
Youxing Jiang

Publication type:

Article

A comparative study of the cryo-EM structures of Saccharomyces cerevisiae and human anaphase-promoting complex/cyclosome (APC/C).

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.100821

By:

Vazquez Fernandez, Ester;
Yang, Jing;
Zhang, Ziguo;
Andreeva, Antonina E.;
Emsley, Paul;
Barford, David

Publication type:

Article

Operation regimes of spinal circuits controlling locomotion and the role of supraspinal drives and sensory feedback.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.98841

By:

Rybak, Ilya A.;
Shevtsova, Natalia A.;
Markin, Sergey N.;
Prilutsky, Boris I.;
Frigon, Alain

Publication type:

Article

Root-specific theanine metabolism and regulation at the single-cell level in tea plants (Camellia sinensis).

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95891

By:

Shijia Lin;
Yiwen Zhang;
Shupei Zhang;
Yijie Wei;
Mengxue Han;
Yamei Deng;
Jiayi Guo;
Biying Zhu;
Tianyuan Yang;
Enhua Xia;
Xiaochun Wan;
Lucas, William J.;
Zhaoliang Zhang

Publication type:

Article

Delivery of a Jagged1-PEG-MAL hydrogel with pediatric human bone cells regenerates critically sized craniofacial bone defects.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.92925

By:

Kamalakar, Archana;
Tobin, Brendan;
Kaimari, Sundus;
Robinson, M. Hope;
Toma, Afra I.;
Cha, Timothy;
Chihab, Samir;
Moriarity, Irica;
Gautam, Surabhi;
Bhattaram, Pallavi;
Abramowicz, Shelly;
Drissi, Hicham;
Garcia, Andres;
Wood, Levi;
Goudy, Steven L.

Publication type:

Article

Robust optogenetic inhibition with red-light-sensitive anion-conducting channelrhodopsins.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.90100

By:

Oppermann, Johannes;
Rozenberg, Andrey;
Fabrin, Thomaz;
González-Cabrera, Cristian;
Parker, Rafael;
Béjà, Oded;
Prigge, Matthias;
Hegemann, Peter

Publication type:

Article

Multi-level processing of emotions in life motion signals revealed through pupil responses.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.89873

By:

Tian Yuan;
Li Wang;
Yi Jiang

Publication type:

Article

Systems analysis of miR-199a/b-5p and multiple miR-199a/b-5p targets during chondrogenesis.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.89701

By:

Patel, Krutik;
Barter, Matt;
Soul, Jamie;
Clark, Peter;
Proctor, Carole;
Clark, Ian;
Young, David;
Shanley, Daryl P.

Publication type:

Article

Genome-wide mapping of native co-localized G4s and R-loops in living cells.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.99026

By:

Ting Liu;
Xing Shen;
Yijia Ren;
Hongyu Lu;
Yu Liu;
Chong Chen;
Lin Yu;
Zhihong Xue

Publication type:

Article

Cell class-specific long-range axonal projections of neurons in mouse whisker-related somatosensory cortices.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.97602

By:

Yanqi Liu;
Bech, Pol;
Tamura, Keita;
Délez, Lucas T.;
Crochet, Sylvain;
Petersen, Carl C. H.

Publication type:

Article

Regulatory genome annotation of 33 insect species.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.96738

By:

Asma, Hasiba;
Tieke, Ellen;
Deem, Kevin D.;
Rahmat, Jabale;
Dong, Tiffany;
Xinbo Huang;
Yoshinori Tomoyasu;
Halfon, Marc S.

Publication type:

Article

Systematic evaluation of multifactorial causal associations for Alzheimer's disease and an interactive platform MRAD developed based on Mendelian randomization analysis.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.96224

By:

Tianyu Zhao;
Hui Li;
Meishuang Zhang;
Yang Xu;
Ming Zhang;
Li Chen

Publication type:

Article

Transcriptional inhibition after irradiation occurs preferentially at highly expressed genes in a manner dependent on cell cycle progression.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.94001

By:

Zulong Chen;
Xin Wang;
Xinlei Gao;
Arslanovic, Nina;
Kaifu Chen;
Tyler, Jessica K.

Publication type:

Article

Cell-cell interaction determines cell fate of mesoderm-derived cell in tongue development through Hh signaling.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.85042

By:

Maiko Kawasaki;
Katsushige Kawasaki;
Finsa Tisna Sari;
Takehisa Kudo;
Jun Nihara;
Madoka Kitamura;
Takahiro Nagai;
Vanessa Utama;
Yoko Ishida;
Fumiya Meguro;
Kesuma, Alex;
Akira Fujita;
Takayuki Nishimura;
Yuan Kogure;
Satoshi Maruyama;
Jun-ichi Tanuma;
Yoshito Kakihara;
Takeyasu Maeda;
Ghafoor, Sarah;
Khonsari, Roman H.

Publication type:

Article

Being a PhD student in Morocco today.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.104070

By:

BEDRAOUI, ANAS

Publication type:

Article

Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.98300

By:

Hall, Michael B.;
Wick, Ryan R.;
Judd, Louise M.;
Nguyen, An N.;
Steinig, Eike J.;
Ouli Xie;
Davies, Mark;
Seemann, Torsten;
Stinear, Timothy P.;
Coin, Lachlan

Publication type:

Article

Resting natural killer cells promote the progress of colon cancer liver metastasis by elevating tumor- derived stem cell factor.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.97201

By:

Chenchen Mao;
Yanyu Chen;
Dong Xing;
Teming Zhang;
Yangxuan Lin;
Cong Long;
Jiaye Yu;
Yunhui Luo;
Tao Ming;
Wangkai Xie;
Zheng Han;
Dianfeng Mei;
Dan Xiang;
Mingdong Lu;
Xian Shen;
Xiangyang Xue

Publication type:

Article

Astrogliosis and neuroinflammation underlie scoliosis upon cilia dysfunction.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.96831

By:

Djebar, Morgane;
Anselme, Isabelle;
Pezeron, Guillaume;
Bardet, Pierre-Luc;
Cantaut-Belarif, Yasmine;
Eschstruth, Alexis;
López-Santos, Diego;
Le Ribeuz, Hélène;
Jenett, Arnim;
Khoury, Hanane;
Veziers, Joelle;
Parmentier, Caroline;
Hirschler, Aurélie;
Carapito, Christine;
Bachmann-Gagescu, Ruxandra;
Schneider-Maunoury, Sylvie;
Vesque, Christine

Publication type:

Article

The conserved genetic program of male germ cells uncovers ancient regulators of human spermatogenesis.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95774

By:

Brattig-Correia, Rion;
Almeida, Joana M.;
Wyrwoll, Margot Julia;
Julca, Irene;
Sobral, Daniel;
Shekhar Misra, Chandra;
Di Persio, Sara;
Gastón Guilgur, Leonardo;
Schuppe, Hans-Christian;
Silva, Neide;
Prudêncio, Pedro;
Nóvoa, Ana;
Leocádio, Ana S.;
Bom, Joana;
Laurentino, Sandra;
Mallo, Moises;
Kliesch, Sabine;
Mutwi, Marek;
Rocha, Luis M.;
Tüttelmann, Frank

Publication type:

Article

Sensory- memory interactions via modular structure explain errors in visual working memory.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95160

By:

Jun Yang;
Hanqi Zhang;
Sukbin Lim

Publication type:

Article

Topological stress triggers persistent DNA lesions in ribosomal DNA with ensuing formation of PML-nucleolar compartment.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.91304

By:

Urbancokova, Alexandra;
Hornofova, Terezie;
Novak, Josef;
Salajkova, Sarka Andrs;
Stemberkova Hubackova, Sona;
Uvizl, Alena;
Buchtova, Tereza;
Mistrik, Martin;
McStay, Brian;
Hodny, Zdenek;
Bartek, Jiri;
Vasicova, Pavla

Publication type:

Article

Transcriptional responses in a mouse model of silicone wire embolization induced acute retinal artery ischemia and reperfusion.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.98949

By:

Yuedan Wang;
Ying Li;
Jiaqing Feng;
Chuansen Wang;
Yuwei Wan;
Bingyang Lv;
Yinming Li;
Hao Xie;
Ting Chen;
Faxi Wang;
Ziyue Li;
Anhuai Yang;
Xuan Xiao

Publication type:

Article

Robust estimation of cancer and immune cell-type proportions from bulk tumor ATAC-Seq data.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.94833

By:

Gabriel, Aurélie Anne-Gaëlle;
Racle, Julien;
Falquet, Maryline;
Jandus, Camilla;
Gfeller, David

Publication type:

Article

Negative cell cycle regulation by calcineurin is necessary for proper beta cell regeneration in zebrafish.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.88813

By:

Massoz, Laura;
Bergemann, David;
Lavergne, Arnaud;
Reynders, Célia;
Désiront, Caroline;
Goossens, Chiara;
Flasse, Lydie;
Peers, Bernard;
Voz, Marianne M.;
Manfroid, Isabelle

Publication type:

Article

A modified BPaL regimen for tuberculosis treatment replaces linezolid with inhaled spectinamides.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.96190

By:

Ali, Malik Zohaib;
Dutt, Taru S.;
MacNeill, Amy;
Walz, Amanda;
Pearce, Camron;
Ha Lam;
Philp, Jamie S.;
Patterson, Johnathan;
Henao-Tamayo, Marcela;
Lee, Richard;
Jiuyu Liu;
Robertson, Gregory T.;
Hickey, Anthony J.;
Meibohm, Bernd;
Gonzalez Juarrero, Mercedes

Publication type:

Article

LPS-induced systemic inflammation is suppressed by the PDZ motif peptide of ZO-1 via regulation of macrophage M1/M2 polarization.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95285

By:

Hyun-Chae Lee;
Sun-Hee Park;
Hye Min Jeong;
Goeun Shin;
Sung In Lim;
Jeongtae Kim;
Jaewon Shim;
Yeong-Min Park;
Kyoung Seob Song

Publication type:

Article

Alasemenia, the earliest ovule with three wings and without cupule.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.92962

By:

Deming Wang;
Jiangnan Yang;
Le Liu;
Yi Zhou;
Peng Xu;
Min Qin;
Pu Huang

Publication type:

Article

A novel bioinformatics pipeline for the identification of immune inhibitory receptors as potential therapeutic targets.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.92870

By:

Singh, Akashdip;
Bedate, Alberto Miranda;
von Richthofen, Helen J.;
Vijver, Saskia V.;
van der Vlist, Michiel;
Kuhn, Raphael;
Yermanos, Alexander;
Kuball, Jürgen J.;
Kesmir, Can;
Ramos, M. Ines Pascoal;
Meyaard, Linde

Publication type:

Article

Decoding the identity of rare tumors: Solitary fibrous tumors have gene expression signatures similar to those of neuroendocrine tumors.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.98072

By:

YUAN, QINGCHEN;
KAUR, PRABHJOT;
GURYANOVA, OLGA A.

Publication type:

Article

Dynamic basis of lipopolysaccharide export by LptB2FGC.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.99338

By:

Dajka, Marina;
Rath, Tobias;
Morgner, Nina;
Joseph, Benesh

Publication type:

Article

Single turnover transient state kinetics reveals processive protein unfolding catalyzed by Escherichia coli ClpB.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.99052

By:

Banwait, Jaskamaljot Kaur;
Islam, Liana;
Lucius, Aaron L.

Publication type:

Article

Super-enhancer-driven ZFP36L1 promotes PD-L1 expression in infiltrative gastric cancer.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.96445

By:

Xujin Wei;
Jie Liu;
Jia Cheng;
Wangyu Cai;
Wen Xie;
Kang Wang;
Lingyun Lin;
Jingjing Hou;
Jianchun Cai;
Huiqin Zhuo

Publication type:

Article

Activation of polycystin-1 signaling by binding of stalk-derived peptide agonists.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95992

By:

Pawnikar, Shristi;
Magenheimer, Brenda S.;
Joshi, Keya;
Nevarez-Munoz, Ericka;
Haldane, Allan;
Maser, Robin L.;
Yinglong Miao

Publication type:

Article

Interchromosomal segmental duplication drives translocation and loss of P. falciparum histidine- rich protein 3.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.93534

By:

Hathaway, Nicholas J.;
Kim, Isaac E.;
WernsmanYoung, Neeva;
Sin Ting Hui;
Crudale, Rebecca;
Liang, Emily Y.;
Nixon, Christian P.;
Giesbrecht, David;
Juliano, Jonathan J.;
Parr, Jonathan B.;
Bailey, Jeffrey A.

Publication type:

Article

Peptidoglycan- Chi3l1 interaction shapes gut microbiota in intestinal mucus layer.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.92994

By:

Yan Chen;
Ruizhi Yang;
Bin Qi;
Zhao Shan

Publication type:

Article

BMP2 and BMP7 cooperate with H3.3K27M to promote quiescence and invasiveness in pediatric diffuse midline gliomas.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.91313

By:

Huchede, Paul;
Meyer, Swann;
Berthelot, Clement;
Hamadou, Maud;
Bertrand-Chapel, Adrien;
Rakotomalala, Andria;
Manceau, Line;
Tomine, Julia;
Lespinasse, Nicolas;
Lewandowski, Paul;
Cordier-Bussat, Martine;
Broutier, Laura;
Dutour, Aurelie;
Rochet, Isabelle;
Blay, Jean-Yves;
Degletagne, Cyril;
Attignon, Valery;
Montero-Carcaboso, Angel;
Le Grand, Marion;
Pasquier, Eddy

Publication type:

Article

1.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.90465

By:

Farquhar, Megan E.;
Qianqian Yang;
Vegh, Viktor

Publication type:

Article

Cyclic di-GMP as an antitoxin regulates bacterial genome stability and antibiotic persistence in biofilms.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.99194

By:

Hebin Liao;
Xiaodan Yan;
Chenyi Wang;
Chun Huang;
Wei Zhang;
Leyi Xiao;
Jun Jiang;
Yongjia Bao;
Tao Huang;
Hanbo Zhang;
Chunming Guo;
Yufeng Zhang;
Yingying Pu

Publication type:

Article

Noncaloric monosaccharides induce excessive sprouting angiogenesis in zebrafish via foxo1a-marcksl1a signal.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95427

By:

Xiaoning Wang;
Jinxiang Zhao;
Jiehuan Xu;
Bowen Li;
Xia Liu;
Gangcai Xie;
Xuchu Duan;
Dong Liu

Publication type:

Article

Inhibition of O-GlcNAc transferase activates type I interferon-dependent antitumor immunity by bridging cGAS-STING pathway.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.94849

By:

Jianwen Chen;
Bao Zhao;
Hong Dong;
Tianliang Li;
Xiang Cheng;
Wang Gong;
Jing Wang;
Junran Zhang;
Gang Xin;
Yanbao Yu;
Lei, Yu L.;
Black, Jennifer D.;
Zihai Li;
Haitao Wen

Publication type:

Article

The role of Imp and Syp RNA-binding proteins in precise neuronal elimination by apoptosis through the regulation of transcription factors.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.91634

By:

Wenyue Guan;
Ziyan Nie;
Laurençon, Anne;
Bouchet, Mathilde;
Godin, Christophe;
Kabir, Chérif;
Darnas, Aurelien;
Enriquez, Jonathan

Publication type:

Article

Whole genomes from the extinct Xerces Blue butterfly can help identify declining insect species.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.87928

By:

de-Dios, Toni;
Fontsere, Claudia;
Renom, Pere;
Stiller, Josefin;
Llovera, Laia;
Uliano-Silva, Marcela;
Sánchez-Gracia, Alejandro;
Lizano, Esther;
Caballero, Berta;
Navarro, Arcadi;
Civit, Sergi;
Robbins, Robert K.;
Blaxter, Mark;
Marquès, Tomàs;
Vila, Roger;
Lalueza-Fox, Carles

Publication type:

Article

A chromatic feature detector in the retina signals visual context changes.

Published in:

eLife, 2024, p. 1

By:

Höfling, Larissa;
Szatko, Klaudia P.;
Behrens, Christian;
Yuyao Deng;
Yongrong Qiu;
Klindt, David Alexander;
Jessen, Zachary;
Schwartz, Gregory W.;
Bethge, Matthias;
Berens, Philipp;
Franke, Katrin;
Ecker, Alexander S.;
Euler, Thomas

Publication type:

Article

A MSTNDel73C mutation with FGF5 knockout sheep by CRISPR/Cas9 promotes skeletal muscle myofiber hyperplasia.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.86827

By:

Ming-Ming Chen;
Yue Zhao;
Kun Yu;
Xue-Ling Xu;
Xiao-Sheng Zhang;
Jin-Long Zhang;
Su-Jun Wu;
Zhi-Mei Liu;
Yi-Ming Yuan;
Xiao-Fei Guo;
Shi-Yu Qi;
Guang Yi;
Shu-Qi Wang;
Huang-Xiang Li;
Ao-Wu Wu;
Guo-Shi Liu;
Shou-Long Deng;
Hong-Bing Han;
Feng-Hua Lv;
Di Lian

Publication type:

Article