Works matching IS 20492618 AND DT 2024 AND VI 12

Results: 249

Phenology and ecological role of aerobic anoxygenic phototrophs in freshwaters.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01786-0

By:

Villena-Alemany, Cristian;
Mujakić, Izabela;
Fecskeová, Livia K.;
Woodhouse, Jason;
Auladell, Adrià;
Dean, Jason;
Hanusová, Martina;
Socha, Magdalena;
Gazulla, Carlota R.;
Ruscheweyh, Hans-Joachim;
Sunagawa, Shinichi;
Silva Kavagutti, Vinicius;
Andrei, Adrian-Ştefan;
Grossart, Hans-Peter;
Ghai, Rohit;
Koblížek, Michal;
Piwosz, Kasia

Publication type:

Article

Placental TLR recognition of salivary and subgingival microbiota is associated with pregnancy complications.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01761-9

By:

Pax, Kazune;
Buduneli, Nurcan;
Alan, Murat;
Meric, Pinar;
Gurlek, Onder;
Dabdoub, Shareef M.;
Kumar, Purnima S.

Publication type:

Article

Ecological patterns and processes of temporal turnover within lung infection microbiota.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01780-6

By:

Gavillet, Helen;
Hatfield, Lauren;
Jones, Andrew;
Maitra, Anirban;
Horsley, Alexander;
Rivett, Damian;
van der Gast, Christopher

Publication type:

Article

Correction: Host genotype-specific rhizosphere fungus enhances drought resistance in wheat.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01794-0

By:

Yue, Hong;
Sun, Xuming;
Wang, Tingting;
Zhang, Ali;
Han, Dejun;
Wei, Gehong;
Song, Weining;
Shu, Duntao

Publication type:

Article

Genomic, functional, and metabolic enhancements in multidrug-resistant Enterobacter bugandensis facilitating its persistence and succession in the International Space Station.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01777-1

By:

Sengupta, Pratyay;
Muthamilselvi Sivabalan, Shobhan Karthick;
Singh, Nitin Kumar;
Raman, Karthik;
Venkateswaran, Kasthuri

Publication type:

Article

Cluster-specific associations between the gut microbiota and behavioral outcomes in preschool-aged children.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01773-5

By:

van de Wouw, Marcel;
Wang, Yanan;
Workentine, Matthew L.;
Vaghef-Mehrabani, Elnaz;
Barth, Delaney;
Mercer, Emily M.;
Dewey, Deborah;
Arrieta, Marie-Claire;
Reimer, Raylene A.;
Tomfohr-Madsen, Lianne;
Giesbrecht, Gerald F.

Publication type:

Article

Contigs directed gene annotation (ConDiGA) for accurate protein sequence database construction in metaproteomics.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01775-3

By:

Wu, Enhui;
Mallawaarachchi, Vijini;
Zhao, Jinzhi;
Yang, Yi;
Liu, Hebin;
Wang, Xiaoqing;
Shen, Chengpin;
Lin, Yu;
Qiao, Liang

Publication type:

Article

Microbiota-derived indoles alleviate intestinal inflammation and modulate microbiome by microbial cross-feeding.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01750-y

By:

Wang, Gang;
Fan, Yuxin;
Zhang, Guolong;
Cai, Shuang;
Ma, Yonghang;
Yang, Lijie;
Wang, Yuming;
Yu, Haitao;
Qiao, Shiyan;
Zeng, Xiangfang

Publication type:

Article

Intact lung tissue and bronchoalveolar lavage fluid are both suitable for the evaluation of murine lung microbiome in acute lung injury.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01772-6

By:

Zheng, Lijun;
Liu, Chengjun;
Wang, Hongjing;
Zhang, Jun;
Mao, Lejiao;
Dong, Xiaomei;
Hu, Siyao;
Li, Na;
Pi, Dandan;
Qiu, Jingfu;
Xu, Feng;
Chen, Chengzhi;
Zou, Zhen

Publication type:

Article

Lose-lose consequences of bacterial community-driven invasions in soil.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01763-7

By:

Liu, Xipeng;
Salles, Joana Falcão

Publication type:

Article

Global abundance patterns, diversity, and ecology of Patescibacteria in wastewater treatment plants.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01769-1

By:

Hu, Huifeng;
Kristensen, Jannie Munk;
Herbold, Craig William;
Pjevac, Petra;
Kitzinger, Katharina;
Hausmann, Bela;
Dueholm, Morten Kam Dahl;
Nielsen, Per Halkjaer;
Wagner, Michael

Publication type:

Article

Multi-omics reveals that alkaline mineral water improves the respiratory health and growth performance of transported calves.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01742-4

By:

Qi, Jiancheng;
Gan, Linli;
Huang, Fangyuan;
Xie, Yue;
Guo, Hongrui;
Cui, Hengmin;
Deng, Junliang;
Gou, Liping;
Cai, Dongjie;
Pan, Chunhui;
Lu, Xia;
Shah, Ali Mujtaba;
Fang, Jing;
Zuo, Zhicai

Publication type:

Article

Host genotype-specific rhizosphere fungus enhances drought resistance in wheat.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01770-8

By:

Yue, Hong;
Sun, Xuming;
Wang, Tingting;
Zhang, Ali;
Han, Dejun;
Wei, Gehong;
Song, Weining;
Shu, Duntao

Publication type:

Article

New insights into bioaugmented removal of sulfamethoxazole in sediment microcosms: degradation efficiency, ecological risk and microbial mechanisms.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01741-5

By:

Chen, Jianfei;
Chen, Xiuli;
Zhu, Ying;
Yan, Shuang;
Xie, Shuguang

Publication type:

Article

Global prevalence of organohalide-respiring bacteria dechlorinating polychlorinated biphenyls in sewage sludge.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01754-8

By:

Xu, Guofang;
Zhao, Siyan;
Rogers, Matthew J.;
Chen, Chen;
He, Jianzhong

Publication type:

Article

A first characterization of the microbiota-resilience link in swine.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01771-7

By:

Mancin, Enrico;
Maltecca, Christian;
Huang, Yi Jian;
Mantovani, Roberto;
Tiezzi, Francesco

Publication type:

Article

Mapping the widespread distribution and transmission dynamics of linezolid resistance in humans, animals, and the environment.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01744-2

By:

Shen, Weiyi;
Cai, Chang;
Dong, Ning;
Chen, Jiawei;
Zhang, Rong;
Cai, Jiachang

Publication type:

Article

Biofilm colonization and succession in a full-scale partial nitritation-anammox moving bed biofilm reactor.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01762-8

By:

Suarez, Carolina;
Rosenqvist, Tage;
Dimitrova, Ivelina;
Sedlacek, Christopher J.;
Modin, Oskar;
Paul, Catherine J.;
Hermansson, Malte;
Persson, Frank

Publication type:

Article

Perturbation and resilience of the gut microbiome up to 3 months after β-lactams exposure in healthy volunteers suggest an important role of microbial β-lactamases.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01746-0

By:

d'Humières, Camille;
Delavy, Margot;
Alla, Laurie;
Ichou, Farid;
Gauliard, Emilie;
Ghozlane, Amine;
Levenez, Florence;
Galleron, Nathalie;
Quinquis, Benoit;
Pons, Nicolas;
Mullaert, Jimmy;
Bridier-Nahmias, Antoine;
Condamine, Bénédicte;
Touchon, Marie;
Rainteau, Dominique;
Lamazière, Antonin;
Lesnik, Philippe;
Ponnaiah, Maharajah;
Lhomme, Marie;
Sertour, Natacha

Publication type:

Article

Interindividual differences in aronia juice tolerability linked to gut microbiome and metabolome changes—secondary analysis of a randomized placebo-controlled parallel intervention trial.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01774-4

By:

Lackner, Sonja;
Mahnert, Alexander;
Moissl-Eichinger, Christine;
Madl, Tobias;
Habisch, Hansjörg;
Meier-Allard, Nathalie;
Kumpitsch, Christina;
Lahousen, Theresa;
Kohlhammer-Dohr, Alexandra;
Mörkl, Sabrina;
Strobl, Herbert;
Holasek, Sandra

Publication type:

Article

Multi-omics reveals that alkaline mineral water improves the respiratory health and growth performance of transported calves.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01742-4

By:

Qi, Jiancheng;
Gan, Linli;
Huang, Fangyuan;
Xie, Yue;
Guo, Hongrui;
Cui, Hengmin;
Deng, Junliang;
Gou, Liping;
Cai, Dongjie;
Pan, Chunhui;
Lu, Xia;
Shah, Ali Mujtaba;
Fang, Jing;
Zuo, Zhicai

Publication type:

Article

The astounding exhaustiveness and speed of the Astral mass analyzer for highly complex samples is a quantum leap in the functional analysis of microbiomes.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01766-4

By:

Dumas, Thibaut;
Martinez Pinna, Roxana;
Lozano, Clément;
Radau, Sonja;
Pible, Olivier;
Grenga, Lucia;
Armengaud, Jean

Publication type:

Article

Macroalgal microbiomes unveil a valuable genetic resource for halogen metabolism.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01740-6

By:

Lavecchia, Anna;
Fosso, Bruno;
Engelen, Aschwin H.;
Borin, Sara;
Manzari, Caterina;
Picardi, Ernesto;
Pesole, Graziano;
Placido, Antonio

Publication type:

Article

Proportion-based normalizations outperform compositional data transformations in machine learning applications.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01747-z

By:

Yerke, Aaron;
Fry Brumit, Daisy;
Fodor, Anthony A.

Publication type:

Article

Host starvation and in hospite degradation of algal symbionts shape the heat stress response of the Cassiopea-Symbiodiniaceae symbiosis.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01738-0

By:

Toullec, Gaëlle;
Rädecker, Nils;
Pogoreutz, Claudia;
Banc-Prandi, Guilhem;
Escrig, Stéphane;
Genoud, Christel;
Olmos, Cristina Martin;
Spangenberg, Jorge;
Meibom, Anders

Publication type:

Article

Bacteroides salyersiae is a potent chondroitin sulfate-degrading species in the human gut microbiota.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01768-2

By:

Wang, Yamin;
Ma, Mingfeng;
Dai, Wei;
Shang, Qingsen;
Yu, Guangli

Publication type:

Article

From phyllosphere to insect cuticles: silkworms gather antifungal bacteria from mulberry leaves to battle fungal parasite attacks.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01764-6

By:

Zhao, Pengfei;
Hong, Song;
Li, Yuekun;
Chen, Haimin;
Gao, Hanchun;
Wang, Chengshu

Publication type:

Article

Time-shifted expression of acetoclastic and methylotrophic methanogenesis by a single Methanosarcina genomospecies predominates the methanogen dynamics in Philippine rice field soil.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01739-z

By:

Li, Xin;
Bei, Qicheng;
Rabiei Nematabad, Mehrdad;
Peng, Jingjing;
Liesack, Werner

Publication type:

Article

Multi-omics reveal mechanisms of high enteral starch diet mediated colonic dysbiosis via microbiome-host interactions in young ruminant.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01760-w

By:

Jin, Chunjia;
Wu, Shengru;
Liang, Ziqi;
Zhang, Jun;
Lei, Xinjian;
Bai, Hanxun;
Liang, Gaofeng;
Su, Xiaodong;
Chen, Xiaodong;
Wang, Peiyue;
Wang, Yue;
Guan, Leluo;
Yao, Junhu

Publication type:

Article

Novel functional insights into the microbiome inhabiting marine plastic debris: critical considerations to counteract the challenges of thin biofilms using multi-omics and comparative metaproteomics.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01751-x

By:

Messer, Lauren F.;
Lee, Charlotte E.;
Wattiez, Ruddy;
Matallana-Surget, Sabine

Publication type:

Article

Particle-attached bacteria act as gatekeepers in the decomposition of complex phytoplankton polysaccharides.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01757-5

By:

Wang, Feng-Qing;
Bartosik, Daniel;
Sidhu, Chandni;
Siebers, Robin;
Lu, De-Chen;
Trautwein-Schult, Anke;
Becher, Dörte;
Huettel, Bruno;
Rick, Johannes;
Kirstein, Inga V.;
Wiltshire, Karen H.;
Schweder, Thomas;
Fuchs, Bernhard M.;
Bengtsson, Mia M.;
Teeling, Hanno;
Amann, Rudolf I.

Publication type:

Article

Integrated meta-omics reveals the regulatory landscape involved in lipid metabolism between pig breeds.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01743-3

By:

Sun, Jiajie;
Xie, Fang;
Wang, Jing;
Luo, Junyi;
Chen, Ting;
Jiang, Qingyan;
Xi, Qianyun;
Liu, George E.;
Zhang, Yongliang

Publication type:

Article

Correction: A tripartite bacterial-fungal-plant symbiosis in the mycorrhiza-shaped microbiome drives plant growth and mycorrhization.

Published in:

2024

By:

Zhang, Changfeng;
van der Heijden, Marcel G. A.;
Dodds, Bethany K.;
Nguyen, Thi Bich;
Spooren, Jelle;
Valzano‑Held, Alain;
Cosme, Marco;
Berendsen, Roeland L.

Publication type:

Correction Notice

Gut microbiota modulation enhances the immune capacity of lizards under climate warming.

Published in:

Microbiome, 2024, v. 12, p. 1, doi. 10.1186/s40168-023-01736-2

By:

Yang, Jing;
Liu, Weiqiang;
Han, Xingzhi;
Hao, Xin;
Yao, Qibin;
Du, Weiguo

Publication type:

Article

Effect of a multi-strain probiotic mixture consumption on anxiety and depression symptoms induced in adult mice by postnatal maternal separation.

Published in:

Microbiome, 2024, v. 12, p. 1, doi. 10.1186/s40168-024-01752-w

By:

De Santa, Francesca;
Strimpakos, Georgios;
Marchetti, Nicole;
Gargari, Giorgio;
Torcinaro, Alessio;
Arioli, Stefania;
Mora, Diego;
Petrella, Carla;
Farioli-Vecchioli, Stefano

Publication type:

Article

Gut microbiota contributes to bisphenol A-induced maternal intestinal and placental apoptosis, oxidative stress, and fetal growth restriction in pregnant ewe model by regulating gut-placental axis.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01749-5

By:

Zhang, Hao;
Zha, Xia;
Zhang, Bei;
Zheng, Yi;
Elsabagh, Mabrouk;
Wang, Hongrong;
Wang, Mengzhi

Publication type:

Article

Novel insights into the rhizosphere and seawater microbiome of Zostera marina in diverse mariculture zones.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01759-3

By:

Sun, Hao;
Wang, Tianyu;
Liu, Shuai;
Tang, Xiaoyu;
Sun, Jie;
Liu, Xuerui;
Zhao, Ye;
Shen, Pingping;
Zhang, Yanying

Publication type:

Article

Metagenome-assembled genome reveals species and functional composition of Jianghan chicken gut microbiota and isolation of Pediococcus acidilactic with probiotic properties.

Published in:

Microbiome, 2024, v. 12, p. 1, doi. 10.1186/s40168-023-01745-1

By:

Shen, Hongye;
Wang, Tinghui;
Dong, Weiwei;
Sun, Guoping;
Liu, Jun;
Peng, Nan;
Zhao, Shumiao

Publication type:

Article

Horizontal gene transfer after faecal microbiota transplantation in adolescents with obesity.

Published in:

Microbiome, 2024, v. 12, p. 1, doi. 10.1186/s40168-024-01748-6

By:

Behling, Anna H.;
Wilson, Brooke C.;
Ho, Daniel;
Cutfield, Wayne S.;
Vatanen, Tommi;
O'Sullivan, Justin M.

Publication type:

Article

Gut microbiome-metabolome interactions predict host condition.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01737-1

By:

Shtossel, Oshrit;
Koren, Omry;
Shai, Iris;
Rinott, Ehud;
Louzoun, Yoram

Publication type:

Article

Correction: Ocular mucosal homeostasis of teleost fish provides insight into the coevolution between microbiome and mucosal immunity.

Published in:

2024

By:

Kong, Weiguang;
Cheng, Gaofeng;
Cao, Jiafeng;
Yu, Jiaqian;
Wang, Xinyou;
Xu, Zhen

Publication type:

Correction Notice

Individualized microbiotas dictate the impact of dietary fiber on colitis sensitivity.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01724-6

By:

Bonazzi, Erica;
Bretin, Alexis;
Vigué, Lucile;
Hao, Fuhua;
Patterson, Andrew D.;
Gewirtz, Andrew T.;
Chassaing, Benoit

Publication type:

Article

Divergent maturational patterns of the infant bacterial and fungal gut microbiome in the first year of life are associated with inter-kingdom community dynamics and infant nutrition.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01735-3

By:

Mercer, Emily M.;
Ramay, Hena R.;
Moossavi, Shirin;
Laforest-Lapointe, Isabelle;
Reyna, Myrtha E.;
Becker, Allan B.;
Simons, Elinor;
Mandhane, Piush J.;
Turvey, Stuart E.;
Moraes, Theo J.;
Sears, Malcolm R.;
Subbarao, Padmaja;
Azad, Meghan B.;
Arrieta, Marie-Claire

Publication type:

Article

Correction: Integrating compositional and functional content to describe vaginal microbiomes in health and disease.

Published in:

2024

By:

Holm, Johanna B.;
France, Michael T.;
Gajer, Pawel;
Ma, Bing;
Brotman, Rebecca M.;
Shardell, Michelle;
Forney, Larry;
Ravel, Jacques

Publication type:

Correction Notice

Gut microbiota-derived LCA mediates the protective effect of PEDV infection in piglets.

Published in:

Microbiome, 2024, v. 12, p. 1, doi. 10.1186/s40168-023-01734-4

By:

Xing, Jun-Hong;
Niu, Tian-Ming;
Zou, Bo-Shi;
Yang, Gui-Lian;
Shi, Chun-Wei;
Yan, Qing-Song;
Sun, Ming-Jie;
Yu, Tong;
Zhang, Shu-Min;
Feng, Xi-Ze;
Fan, Shu-Hui;
Huang, Hai-Bin;
Wang, Jun-Hong;
Li, Ming-Han;
Jiang, Yan-Long;
Wang, Jian-Zhong;
Cao, Xin;
Wang, Nan;
Zeng, Yan;
Hu, Jing-Tao

Publication type:

Article

Early life exposure of infants to benzylpenicillin and gentamicin is associated with a persistent amplification of the gut resistome.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01732-6

By:

Patangia, Dhrati V.;
Grimaud, Ghjuvan;
O'Shea, Carol-Anne;
Ryan, C. A.;
Dempsey, Eugene;
Stanton, Catherine;
Ross, R. Paul

Publication type:

Article

Differential effects of antiretroviral treatment on immunity and gut microbiome composition in people living with HIV in rural versus urban Zimbabwe.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01718-4

By:

Burkhart Colorado, Angela Sofia;
Lazzaro, Alessandro;
Neff, Charles Preston;
Nusbacher, Nichole;
Boyd, Kathryn;
Fiorillo, Suzanne;
Martin, Casey;
Siebert, Janet C.;
Campbell, Thomas B.;
Borok, Margaret;
Palmer, Brent E.;
Lozupone, Catherine

Publication type:

Article

Model-free prediction of microbiome compositions.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01721-9

By:

Asher, Eitan E.;
Bashan, Amir

Publication type:

Article

Functional similarity, despite taxonomical divergence in the millipede gut microbiota, points to a common trophic strategy.

Published in:

Microbiome, 2024, v. 12, p. 1, doi. 10.1186/s40168-023-01731-7

By:

Nweze, Julius Eyiuche;
Šustr, Vladimír;
Brune, Andreas;
Angel, Roey

Publication type:

Article

Autotrophic biofilms sustained by deeply sourced groundwater host diverse bacteria implicated in sulfur and hydrogen metabolism.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01704-w

By:

Valentin-Alvarado, Luis E.;
Fakra, Sirine C.;
Probst, Alexander J.;
Giska, Jonathan R.;
Jaffe, Alexander L.;
Oltrogge, Luke M.;
West-Roberts, Jacob;
Rowland, Joel;
Manga, Michael;
Savage, David F.;
Greening, Chris;
Baker, Brett J.;
Banfield, Jillian F.

Publication type:

Article