Works matching IS 2047217X AND DT 2019 AND VI 8 AND IP 5

Results: 23

Understanding of researcher behavior is required to improve data reliability.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz017

By:

Wass, Mark N;
Ray, Larry;
Michaelis, Martin

Publication type:

Article

Ultra-deep, long-read nanopore sequencing of mock microbial community standards.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz043

By:

Nicholls, Samuel M;
Quick, Joshua C;
Tang, Shuiquan;
Loman, Nicholas J

Publication type:

Article

SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz044

By:

Lampa, Samuel;
Dahlö, Martin;
Alvarsson, Jonathan;
Spjuth, Ola

Publication type:

Article

Software engineering for scientific big data analysis.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz054

By:

Grüning, Björn A;
Lampa, Samuel;
Vaudel, Marc;
Blankenberg, Daniel

Publication type:

Article

multi-omics data simulator for complex disease studies and its application to evaluate multi-omics data analysis methods for disease classification.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz045

By:

Chung, Ren-Hua;
Kang, Chen-Yu

Publication type:

Article

Microbiome Learning Repo (ML Repo): A public repository of microbiome regression and classification tasks.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz042

By:

Vangay, Pajau;
Hillmann, Benjamin M;
Knights, Dan

Publication type:

Article

Metabolic responses of rice cultivars with different tolerance to combined drought and heat stress under field conditions.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz050

By:

Lawas, Lovely Mae F;
Li, Xia;
Erban, Alexander;
Kopka, Joachim;
Jagadish, S V Krishna;
Zuther, Ellen;
Hincha, Dirk K

Publication type:

Article

highly predictive signature of cognition and brain atrophy for progression to Alzheimer's dementia.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz055

By:

Tam, Angela;
Dansereau, Christian;
Iturria-Medina, Yasser;
Urchs, Sebastian;
Orban, Pierre;
Sharmarke, Hanad;
Breitner, John;
Bellec, Pierre;
Initiative, Alzheimer's Disease Neuroimaging

Publication type:

Article

Single-cell transcriptomic landscape of nucleated cells in umbilical cord blood.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz047

By:

Zhao, Yi;
Li, Xiao;
Zhao, Weihua;
Wang, Jingwan;
Yu, Jiawei;
Wan, Ziyun;
Gao, Kai;
Yi, Gang;
Wang, Xie;
Fan, Bingbing;
Wu, Qinkai;
Chen, Bangwei;
Xie, Feng;
Wu, Jinghua;
Zhang, Wei;
Chen, Fang;
Yang, Huanming;
Wang, Jian;
Xu, Xun;
Li, Bin

Publication type:

Article

haplotype-resolved draft genome of the European sardine (Sardina pilchardus).

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz059

By:

Louro, Bruno;
De Moro, Gianluca;
Garcia, Carlos;
Cox, Cymon J;
Veríssimo, Ana;
Sabatino, Stephen J;
Santos, António M;
Canário, Adelino V M

Publication type:

Article

Rice Galaxy: an open resource for plant science.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz028

By:

Juanillas, Venice;
Dereeper, Alexis;
Beaume, Nicolas;
Droc, Gaetan;
Dizon, Joshua;
Mendoza, John Robert;
Perdon, Jon Peter;
Mansueto, Locedie;
Triplett, Lindsay;
Lang, Jillian;
Zhou, Gabriel;
Ratharanjan, Kunalan;
Plale, Beth;
Haga, Jason;
Leach, Jan E;
Ruiz, Manuel;
Thomson, Michael;
Alexandrov, Nickolai;
Larmande, Pierre;
Kretzschmar, Tobias

Publication type:

Article

PseudoFuN: Deriving functional potentials of pseudogenes from integrative relationships with genes and microRNAs across 32 cancers.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz046

By:

Johnson, Travis S;
Li, Sihong;
Franz, Eric;
Huang, Zhi;
Dan Li, Shuyu;
Campbell, Moray J;
Huang, Kun;
Zhang, Yan

Publication type:

Article

photometric stereo-based 3D imaging system using computer vision and deep learning for tracking plant growth.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz056

By:

Bernotas, Gytis;
Scorza, Livia C T;
Hansen, Mark F;
Hales, Ian J;
Halliday, Karen J;
Smith, Lyndon N;
Smith, Melvyn L;
McCormick, Alistair J

Publication type:

Article

Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad taxonomic scale.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz006

By:

Krehenwinkel, Henrik;
Pomerantz, Aaron;
Henderson, James B;
Kennedy, Susan R;
Lim, Jun Ying;
Swamy, Varun;
Shoobridge, Juan Diego;
Graham, Natalie;
Patel, Nipam H;
Gillespie, Rosemary G;
Prost, Stefan

Publication type:

Article

Gigwa v2—Extended and improved genotype investigator.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz051

By:

Sempéré, Guilhem;
Pétel, Adrien;
Rouard, Mathieu;
Frouin, Julien;
Hueber, Yann;
De Bellis, Fabien;
Larmande, Pierre

Publication type:

Article

Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz003

By:

Prost, Stefan;
Armstrong, Ellie E;
Nylander, Johan;
Thomas, Gregg W C;
Suh, Alexander;
Petersen, Bent;
Dalen, Love;
Benz, Brett W;
Blom, Mozes P K;
Palkopoulou, Eleftheria;
Ericson, Per G P;
Irestedt, Martin

Publication type:

Article

genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz036

By:

Huang, Youjun;
Xiao, Lihong;
Zhang, Zhongren;
Zhang, Rui;
Wang, Zhengjia;
Huang, Chunying;
Huang, Ren;
Luan, Yumeng;
Fan, Tongqiang;
Wang, Jianhua;
Shen, Chen;
Zhang, Shenmei;
Wang, Xinwang;
Randall, Jennifer;
Zheng, Bingsong;
Wu, Jiasheng;
Zhang, Qixiang;
Xia, Guohua;
Xu, Chuanmei;
Chen, Ming

Publication type:

Article

Fast and accurate relatedness estimation from high-throughput sequencing data in the presence of inbreeding.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz034

By:

Hanghøj, Kristian;
Moltke, Ida;
Andersen, Philip Alstrup;
Manica, Andrea;
Korneliussen, Thorfinn Sand

Publication type:

Article

EEG dataset and OpenBMI toolbox for three BCI paradigms: an investigation into BCI illiteracy.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz002

By:

Lee, Min-Ho;
Kwon, O-Yeon;
Kim, Yong-Jeong;
Kim, Hong-Kyung;
Lee, Young-Eun;
Williamson, John;
Fazli, Siamac;
Lee, Seong-Whan

Publication type:

Article

De novo transcriptome assembly: A comprehensive cross-species comparison of short-read RNA-Seq assemblers.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz039

By:

Hölzer, Martin;
Marz, Manja

Publication type:

Article

De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz038

By:

Dhar, Ruby;
Seethy, Ashikh;
Pethusamy, Karthikeyan;
Singh, Sunil;
Rohil, Vishwajeet;
Purkayastha, Kakali;
Mukherjee, Indrani;
Goswami, Sandeep;
Singh, Rakesh;
Raj, Ankita;
Srivastava, Tryambak;
Acharya, Sovon;
Rajashekhar, Balaji;
Karmakar, Subhradip

Publication type:

Article

Datastorr: a workflow and package for delivering successive versions of 'evolving data' directly into R.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz035

By:

Falster, Daniel S;
FitzJohn, Richard G;
Pennell, Matthew W;
Cornwell, William K

Publication type:

Article

Correction to: Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning.

Published in:

GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz049

By:

Teng, Haotian;
Cao, Minh Duc;
Hall, Michael B;
Duarte, Tania;
Wang, Sheng;
Coin, Lachlan J M

Publication type:

Article