Works matching IS 20411480 AND DT 2024 AND VI 15

Results: 19

FAIR Data Cube, a FAIR data infrastructure for integrated multi-omics data analysis.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00321-2
By:
- Liao, Xiaofeng;
- Ederveen, Thomas H.A.;
- Niehues, Anna;
- de Visser, Casper;
- Huang, Junda;
- Badmus, Firdaws;
- Doornbos, Cenna;
- Orlova, Yuliia;
- Kulkarni, Purva;
- van der Velde, K. Joeri;
- Swertz, Morris A.;
- Brandt, Martin;
- van Gool, Alain J.;
- 't Hoen, Peter A. C.
Publication type:
Article
Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI).
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00320-3
By:
- Toro, Sabrina;
- Anagnostopoulos, Anna V.;
- Bello, Susan M.;
- Blumberg, Kai;
- Cameron, Rhiannon;
- Carmody, Leigh;
- Diehl, Alexander D.;
- Dooley, Damion M.;
- Duncan, William D.;
- Fey, Petra;
- Gaudet, Pascale;
- Harris, Nomi L.;
- Joachimiak, Marcin P.;
- Kiani, Leila;
- Lubiana, Tiago;
- Munoz-Torres, Monica C.;
- O'Neil, Shawn;
- Osumi-Sutherland, David;
- Puig-Barbe, Aleix;
- Reese, Justin T.
Publication type:
Article
MeSH2Matrix: combining MeSH keywords and machine learning for biomedical relation classification based on PubMed.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00319-w
By:
- Turki, Houcemeddine;
- Dossou, Bonaventure F. P.;
- Emezue, Chris Chinenye;
- Owodunni, Abraham Toluwase;
- Hadj Taieb, Mohamed Ali;
- Ben Aouicha, Mohamed;
- Ben Hassen, Hanen;
- Masmoudi, Afif
Publication type:
Article
Annotation of epilepsy clinic letters for natural language processing.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00316-z
By:
- Fonferko-Shadrach, Beata;
- Strafford, Huw;
- Jones, Carys;
- Khan, Russell A.;
- Brown, Sharon;
- Edwards, Jenny;
- Hawken, Jonathan;
- Shrimpton, Luke E.;
- White, Catharine P.;
- Powell, Robert;
- Sawhney, Inder M. S.;
- Pickrell, William O.;
- Lacey, Arron S.
Publication type:
Article
An extensible and unifying approach to retrospective clinical data modeling: the BrainTeaser Ontology.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00317-y
By:
- Faggioli, Guglielmo;
- Menotti, Laura;
- Marchesin, Stefano;
- Chió, Adriano;
- Dagliati, Arianna;
- de Carvalho, Mamede;
- Gromicho, Marta;
- Manera, Umberto;
- Tavazzi, Eleonora;
- Di Nunzio, Giorgio Maria;
- Silvello, Gianmaria;
- Ferro, Nicola
Publication type:
Article
Concretizing plan specifications as realizables within the OBO foundry.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00315-0
By:
- Duncan, William D.;
- Diller, Matthew;
- Dooley, Damion;
- Hogan, William R.;
- Beverley, John
Publication type:
Article
Mapping vaccine names in clinical trials to vaccine ontology using cascaded fine-tuned domain-specific language models.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00318-x
By:
- Li, Jianfu;
- Li, Yiming;
- Pan, Yuanyi;
- Guo, Jinjing;
- Sun, Zenan;
- Li, Fang;
- He, Yongqun;
- Tao, Cui
Publication type:
Article
Chemical entity normalization for successful translational development of Alzheimer's disease and dementia therapeutics.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00314-1
By:
- Mullin, Sarah;
- McDougal, Robert;
- Cheung, Kei-Hoi;
- Kilicoglu, Halil;
- Beck, Amanda;
- Zeiss, Caroline J.
Publication type:
Article
Empowering standardization of cancer vaccines through ontology: enhanced modeling and data analysis.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00312-3
By:
- Zheng, Jie;
- Li, Xingxian;
- Masci, Anna Maria;
- Kahn, Hayleigh;
- Huffman, Anthony;
- Asfaw, Eliyas;
- Pan, Yuanyi;
- Guo, Jinjing;
- He, Virginia;
- Song, Justin;
- Seleznev, Andrey I.;
- Lin, Asiyah Yu;
- He, Yongqun
Publication type:
Article
Multi-task transfer learning for the prediction of entity modifiers in clinical text: application to opioid use disorder case detection.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, p. 1, doi. 10.1186/s13326-024-00311-4
By:
- Almudaifer, Abdullateef I.;
- Covington, Whitney;
- Hairston, JaMor;
- Deitch, Zachary;
- Anand, Ankit;
- Carroll, Caleb M.;
- Crisan, Estera;
- Bradford, William;
- Walter, Lauren A.;
- Eaton, Ellen F.;
- Feldman, Sue S.;
- Osborne, John D.
Publication type:
Article
Correction to: Semantic units: organizing knowledge graphs into semantically meaningful units of representation.
Published in:
2024
By:
- Vogt, Lars;
- Kuhn, Tobias;
- Hoehndorf, Robert
Publication type:
Correction Notice
Explanatory argumentation in natural language for correct and incorrect medical diagnoses.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00306-1
By:
- Molinet, Benjamin;
- Marro, Santiago;
- Cabrio, Elena;
- Villata, Serena
Publication type:
Article
Semantic units: organizing knowledge graphs into semantically meaningful units of representation.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00310-5
By:
- Lars, Vogt;
- Tobias, Kuhn;
- Robert, Hoehndorf
Publication type:
Article
Leveraging logical definitions and lexical features to detect missing IS-A relations in biomedical terminologies.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00309-y
By:
- Abeysinghe, Rashmie;
- Zheng, Fengbo;
- Shi, Jay;
- Lhatoo, Samden D.;
- Cui, Licong
Publication type:
Article
Elucidating the semantics-topology trade-off for knowledge inference-based pharmacological discovery.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00308-z
By:
- Sosa, Daniel N.;
- Neculae, Georgiana;
- Fauqueur, Julien;
- Altman, Russ B.
Publication type:
Article
Ontological representation, modeling, and analysis of parasite vaccines.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, p. 1, doi. 10.1186/s13326-024-00307-0
By:
- Huffman, Anthony;
- Zhang, Xumeng;
- Lanka, Meghana;
- Zheng, Jie;
- Masci, Anna Maria;
- He, Yongqun
Publication type:
Article
Comparing generative and extractive approaches to information extraction from abstracts describing randomized clinical trials.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, p. 1, doi. 10.1186/s13326-024-00305-2
By:
- Witte, Christian;
- Schmidt, David M.;
- Cimiano, Philipp
Publication type:
Article
RecSOI: recommending research directions using statements of ignorance.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00304-3
By:
- Bibal, Adrien;
- Salem, Nourah M.;
- Cardon, Rémi;
- White, Elizabeth K.;
- Acuna, Daniel E.;
- Burke, Robin;
- Hunter, Lawrence E.
Publication type:
Article
Enriching the FIDEO ontology with food-drug interactions from online knowledge sources.
Published in:
Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00302-5
By:
- Azzi, Rabia;
- Bordea, Georgeta;
- Griffier, Romain;
- Nikiema, Jean Noël;
- Mougin, Fleur
Publication type:
Article