Works matching IS 20411480 AND DT 2023 AND VI 14 AND IP 1

Results: 21

The use of foundational ontologies in biomedical research.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00300-z

By:

Bernabé, César H.;
Queralt-Rosinach, Núria;
Silva Souza, Vítor E.;
Bonino da Silva Santos, Luiz Olavo;
Mons, Barend;
Jacobsen, Annika;
Roos, Marco

Publication type:

Article

BioBLP: a modular framework for learning on multimodal biomedical knowledge graphs.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00301-y

By:

Daza, Daniel;
Alivanistos, Dimitrios;
Mitra, Payal;
Pijnenburg, Thom;
Cochez, Michael;
Groth, Paul

Publication type:

Article

Assessing resolvability, parsability, and consistency of RDF resources: a use case in rare diseases.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00299-3

By:

Zhang, Shuxin;
Benis, Nirupama;
Cornet, Ronald

Publication type:

Article

Impact of COVID-19 research: a study on predicting influential scholarly documents using machine learning and a domain-independent knowledge graph.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00298-4

By:

Rabby, Gollam;
D'Souza, Jennifer;
Oelen, Allard;
Dvorackova, Lucie;
Svátek, Vojtěch;
Auer, Sören

Publication type:

Article

Data management plans as linked open data: exploiting ARGOS FAIR and machine actionable outputs in the OpenAIRE research graph.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00297-5

By:

Papadopoulou, Elli;
Bardi, Alessia;
Kakaletris, George;
Tziotzios, Diamadis;
Manghi, Paolo;
Manola, Natalia

Publication type:

Article

Context-based refinement of mappings in evolving life science ontologies.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00294-8

By:

Yamamoto, Victor Eiti;
Destro, Juliana Medeiros;
dos Reis, Julio Cesar

Publication type:

Article

Analysis and implementation of the DynDiff tool when comparing versions of ontology.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00295-7

By:

Diaz Benavides, Sara;
Cardoso, Silvio D.;
Da Silveira, Marcos;
Pruski, Cédric

Publication type:

Article

Development and validation of the early warning system scores ontology.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00296-6

By:

Zayas, Cilia E.;
Whorton, Justin M.;
Sexton, Kevin W.;
Mabry, Charles D.;
Dowland, S. Clint;
Brochhausen, Mathias

Publication type:

Article

Automatic classification of experimental models in biomedical literature to support searching for alternative methods to animal experiments.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00292-w

By:

Neves, Mariana;
Klippert, Antonina;
Knöspel, Fanny;
Rudeck, Juliane;
Stolz, Ailine;
Ban, Zsofia;
Becker, Markus;
Diederich, Kai;
Grune, Barbara;
Kahnau, Pia;
Ohnesorge, Nils;
Pucher, Johannes;
Schönfelder, Gilbert;
Bert, Bettina;
Butzke, Daniel

Publication type:

Article

Automatic transparency evaluation for open knowledge extraction systems.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00293-9

By:

Basereh, Maryam;
Caputo, Annalina;
Brennan, Rob

Publication type:

Article

Multi-domain knowledge graph embeddings for gene-disease association prediction.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00291-x

By:

Nunes, Susana;
Sousa, Rita T.;
Pesquita, Catia

Publication type:

Article

An extension of the BioAssay Ontology to include pharmacokinetic/pharmacodynamic terminology for the enrichment of scientific workflows.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00288-6

By:

Penn, Steve;
Lomax, Jane;
Karlsson, Anneli;
Antonucci, Vincent;
Zachmann, Carl-Dieter;
Kanza, Samantha;
Schurer, Stephan;
Turner, John

Publication type:

Article

Improving the classification of cardinality phenotypes using collections.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00290-y

By:

Alghamdi, Sarah M.;
Hoehndorf, Robert

Publication type:

Article

Semantically enabling clinical decision support recommendations.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00285-9

By:

Seneviratne, Oshani;
Das, Amar K.;
Chari, Shruthi;
Agu, Nkechinyere N.;
Rashid, Sabbir M.;
McCusker, Jamie;
Franklin, Jade S.;
Qi, Miao;
Bennett, Kristin P.;
Chen, Ching-Hua;
Hendler, James A.;
McGuinness, Deborah L.

Publication type:

Article

FAIR-Checker: supporting digital resource findability and reuse with Knowledge Graphs and Semantic Web standards.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00289-5

By:

Gaignard, Alban;
Rosnet, Thomas;
De Lamotte, Frédéric;
Lefort, Vincent;
Devignes, Marie-Dominique

Publication type:

Article

Features of a FAIR vocabulary.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00286-8

By:

Xu, Fuqi;
Juty, Nick;
Goble, Carole;
Jupp, Simon;
Parkinson, Helen;
Courtot, Mélanie

Publication type:

Article

Multiple sampling schemes and deep learning improve active learning performance in drug-drug interaction information retrieval analysis from the literature.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00287-7

By:

Xie, Weixin;
Fan, Kunjie;
Zhang, Shijun;
Li, Lang

Publication type:

Article

Constructing a knowledge graph for open government data: the case of Nova Scotia disease datasets.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00284-w

By:

Rajabi, Enayat;
Midha, Rishi;
de Souza, Jairo Francisco

Publication type:

Article

The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00283-x

By:

Chan, Lauren E.;
Thessen, Anne E.;
Duncan, William D.;
Matentzoglu, Nicolas;
Schmitt, Charles;
Grondin, Cynthia J.;
Vasilevsky, Nicole;
McMurry, Julie A.;
Robinson, Peter N.;
Mungall, Christopher J.;
Haendel, Melissa A.

Publication type:

Article

MedLexSp – a medical lexicon for Spanish medical natural language processing.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-022-00281-5

By:

Campillos-Llanos, Leonardo

Publication type:

Article

Classifying literature mentions of biological pathogens as experimentally studied using natural language processing.

Published in:

Journal of Biomedical Semantics, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13326-023-00282-y

By:

Jimeno Yepes, Antonio Jose;
Verspoor, Karin

Publication type:

Article