Works matching IS 20411480 AND DT 2014 AND VI 5 AND IP 1

Results: 33

Comparative analysis of knowledge representation and reasoning requirements across a range of life sciences textbooks.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 54, doi. 10.1186/2041-1480-5-51
By:
- Chaudhri, Vinay K.;
- Elenius, Daniel;
- Goldenkranz, Andrew;
- Gong, Allison;
- Martone, Maryann E.;
- Webb, William;
- Yorke-Smith, Neil
Publication type:
Article
AISO: Annotation of Image Segments with Ontologies.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 42, doi. 10.1186/2041-1480-5-50
By:
- Lingutla, Nikhil Tej;
- Preece, Justin;
- Todorovic, Sinisa;
- Cooper, Laurel;
- Moore, Laura;
- Jaiswal, Pankaj
Publication type:
Article
A use case study on late stent thrombosis for ontology-based temporal reasoning and analysis.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 24, doi. 10.1186/2041-1480-5-49
By:
- Kim Clark;
- Sharma, Deepak;
- Rui Qin;
- Chute, Christopher G.;
- Cui Tao
Publication type:
Article
TermGenie - a web-application for pattern-based ontology class generation.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-48
By:
- Dietze, Heiko;
- Berardini, Tanya Z.;
- Foulger, Rebecca E.;
- Hill, David P.;
- Lomax, Jane;
- Osumi-Sutherland, David;
- Roncaglia, Paola;
- Mungall, Christopher J.
Publication type:
Article
TopFed: TCGA tailored federated query processing and linking to LOD.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-47
By:
- Saleem, Muhammad;
- Ngonga Ngomo, Axel-Cyrille;
- Padmanabhuni, Shanmukha S.;
- Iqbal, Aftab;
- Decker, Stefan;
- Almeida, Jonas S.;
- Deus, Helena F.
Publication type:
Article
Automatically exposing OpenLifeData via SADI semantic Web Services.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-46
By:
- Rodríguez González, Alejandro;
- Garcia, Adrian;
- Wilkinson, Mark D.;
- Callahan, Alison;
- Dumontier, Michel;
- Cruz-Toledo, José;
- Egaña Aranguren, Mikel
Publication type:
Article
Why functions are not special dispositions: an improved classification of realizables for top-level ontologies.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 2, doi. 10.1186/2041-1480-5-27
By:
- Röhl, Johannes;
- Jansen, Ludger
Publication type:
Article
Generalising semantic category disambiguation with large lexical resources for fun and profit.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-26
By:
- Pontus Stenetorp;
- Pyysalo, Sampo;
- Ananiadou, Sophia;
- sujii, Jun'ichi T.
Publication type:
Article
Terminology extraction from medical texts in Polish.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-24
By:
- Marciniak, Małgorzata;
- Mykowiecka, Agnieszka
Publication type:
Article
The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 2, doi. 10.1186/2041-1480-5-25
By:
- Malone, James;
- Brown, Andy;
- Lister, Allyson L.;
- Ison, Jon;
- Hull, Duncan;
- Parkinson, Helen;
- Stevens, Robert
Publication type:
Article
An ontological modeling approach for abnormal states and its application in the medical domain.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 2, doi. 10.1186/2041-1480-5-23
By:
- Yuki Yamagata;
- Kouji Kozaki;
- Takeshi Imai;
- Kazuhiko Ohe;
- Riichiro Mizoguchi
Publication type:
Article
Mining characteristics of epidemiological studies from Medline: a case study in obesity.
Published in:
2014
By:
- Karystianis, George;
- Buchan, Iain;
- Nenadic, Goran
Publication type:
Case Study
Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-21
By:
- Haendel, Melissa A.;
- Balhoff, James P.;
- Bastian, Frederic B.;
- Blackburn, David C.;
- Blake, Judith A.;
- Bradford, Yvonne;
- Comte, Aurelie;
- Dahdul, Wasila M.;
- Dececchi, Thomas A.;
- Druzinsky, Robert E.;
- Hayamizu, Terry F.;
- Ibrahim, Nizar;
- Lewis, Suzanna E.;
- Mabee, Paula M.;
- Niknejad, Anne;
- Robinson-Rechavi, Marc;
- Sereno, Paul C.;
- Mungall, Christopher J.
Publication type:
Article
My Corporis Fabrica: an ontology-based tool for reasoning and querying on complex anatomical models.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-20
By:
- Palombi, Olivier;
- Ulliana, Federico;
- Favier, Valentin;
- Léon, Jean-Claude;
- Rousset, Marie-Christine
Publication type:
Article
The ontology of genetic susceptibility factors (OGSF) and its application in modeling genetic susceptibility to vaccine adverse events.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-19
By:
- Yu Lin;
- Yongqun He
Publication type:
Article
A 2013 workshop: vaccine and drug ontology studies (VDOS 2013).
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-16
By:
- Cui Tao;
- Yongqun He;
- Arabandi, Sivaram
Publication type:
Article
Exploitation of semantic methods to cluster pharmacovigilance terms.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-18
By:
- Dupuch, Marie;
- Dupuch, Laëtitia;
- Hamon, Thierry;
- Grabar, Natalia
Publication type:
Article
A rule-based ontological framework for the classification of molecules.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-17
By:
- Magka, Despoina;
- Krötzsch, Markus;
- Horrocks, Ian
Publication type:
Article
Variation ontology: annotator guide.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-9
By:
- Vihinen, Mauno
Publication type:
Article
Thematic series on biomedical ontologies in JBMS: challenges and new directions.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-15
By:
- Hoehndorf, Robert;
- Haendel, Melissa;
- Stevens, Robert;
- Rebholz-Schuhmann, Dietrich
Publication type:
Article
The semanticscience integrated ontology (SIO) for biomedical research and knowledge discovery.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-14
By:
- Dumontier, Michel;
- Baker, Christopher J. O .;
- Baran, Joachim;
- Callahan, Alison;
- Chepelev, Leonid;
- Cruz-Toledo, José;
- Del Rio, Nicholas R.;
- Duck, Geraint;
- Furlong, Laura I.;
- Keath, Nichealla;
- Klassen, Dana;
- McCusker, James P.;
- Queralt-Rosinach, Núria;
- Samwald, Matthias;
- Villanueva-Rosales, Natalia;
- Wilkinson, Mark D.;
- Hoehndorf, Robert
Publication type:
Article
Panacea, a semantic-enabled drug recommendations discovery framework.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-13
By:
- Doulaverakis, Charalampos;
- Nikolaidis, George;
- Kleontas, Athanasios;
- Kompatsiaris, Ioannis
Publication type:
Article
Synonym extraction and abbreviation expansion with ensembles of semantic spaces.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-6
By:
- Henriksson, Aron;
- Moen, Hans;
- Skeppstedt, Maria;
- Daudaravičius, Vidas;
- Duneld, Martin
Publication type:
Article
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-5
By:
- Toshiaki Katayama;
- Wilkinson, Mark D.;
- Kiyoko F. Aoki-Kinoshita;
- Shuichi Kawashima;
- Yasunori Yamamoto;
- Atsuko Yamaguchi;
- Shinobu Okamoto;
- Shin Kawano;
- Jin-Dong Kim;
- Yue Wang;
- Hongyan Wu;
- Yoshinobu Kano;
- Hiromasa Ono;
- Hidemasa Bono;
- Kocbek, Simon;
- Aerts, Jan;
- Yukie Akune;
- Antezana, Erick;
- Kazuharu Arakawa;
- Aranda, Bruno
Publication type:
Article
The epidemiology ontology: an ontology for the semantic annotation of epidemiological resources.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-4
By:
- Pesquita, Catia;
- Ferreira, João D.;
- Couto, Francisco M.;
- Silva, Mário J.
Publication type:
Article
Benchmarking infrastructure for mutation text mining.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-11
By:
- Klein, Artjom;
- Riazanov, Alexandre;
- Hindle, Matthew M.;
- Baker, Christopher J. O.
Publication type:
Article
The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-12
By:
- Van Slyke, Ceri E.;
- Bradford, Yvonne M.;
- Westerfield, Monte;
- Haendel, Melissa A.
Publication type:
Article
The pathway ontology - updates and applications.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-7
By:
- Petri, Victoria;
- Jayaraman, Pushkala;
- Tutaj, Marek;
- Thomas Hayman, G.;
- Smith, Jennifer R.;
- Pons, Jeff De;
- Laulederkind, Stanley J. F.;
- Lowry, Timothy F.;
- Nigam, Rajni;
- Shur-Jen Wang;
- Shimoyama, Mary;
- Dwinell, Melinda R.;
- Munzenmaier, Diane H.;
- Worthey, Elizabeth A.;
- Jacob, Howard J.
Publication type:
Article
Mining images in biomedical publications: Detection and analysis of gel diagrams.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-10
By:
- Kuhn, Tobias;
- Levente Nagy, Mate;
- ThaiBinh Luong;
- Krauthammer, Michael
Publication type:
Article
Semantic interestingness measures for discovering association rules in the skeletal Dysplasia domain.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-8
By:
- Paul, Razan;
- Groza, Tudor;
- Hunter, Jane;
- Zankl, Andreas
Publication type:
Article
Detecting concept mentions in biomedical text using hidden Markov model: multiple concept types at once or one at a time?
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-3
By:
- Torii, Manabu;
- Wagholikar, Kavishwar;
- Hongfang Liu
Publication type:
Article
The languages of health in general practice electronic patient records: a Zipf's law analysis.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-2
By:
- Kalankesh, Leila R.;
- New, John P.;
- Baker, Patricia G.;
- Brass, Andy
Publication type:
Article
Neuroanatomical domain of the foundational model of anatomy ontology.
Published in:
Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-1
By:
- Nolan Nichols, B.;
- Mejino, Jose L. V.;
- Detwiler, Landon T.;
- Nilsen, Trond T.;
- Martone, Maryann E.;
- Turner, Jessica A.;
- Rubin, Daniel L.;
- Brinkley, James F.
Publication type:
Article