Works matching IS 17598753 AND DT 2020 AND VI 11 AND IP 1

Results: 33

Hybrid dysgenesis in Drosophila virilis results in clusters of mitotic recombination and loss-of-heterozygosity but leaves meiotic recombination unaltered.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-0205-0

By:

Hemmer, Lucas W.;
Dias, Guilherme B.;
Smith, Brittny;
Van Vaerenberghe, Kelley;
Howard, Ashley;
Bergman, Casey M.;
Blumenstiel, Justin P.

Publication type:

Article

Diverse transposable element landscapes in pathogenic and nonpathogenic yeast models: the value of a comparative perspective.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00215-x

By:

Maxwell, Patrick H.

Publication type:

Article

SeqURE – a new copy-capture based method for sequencing of unknown Retroposition events.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00228-6

By:

Komkov, Alexander Y.;
Urazbakhtin, Shamil Z.;
Saliutina, Maria V.;
Komech, Ekaterina A.;
Shelygin, Yuri A.;
Nugmanov, Gaiaz A.;
Shubin, Vitaliy P.;
Smirnova, Anastasia O.;
Bobrov, Mikhail Y.;
Tsukanov, Alexey S.;
Snezhkina, Anastasia V.;
Kudryavtseva, Anna V.;
Lebedev, Yuri B.;
Mamedov, Ilgar Z.

Publication type:

Article

Intruder (DD38E), a recently evolved sibling family of DD34E/Tc1 transposons in animals.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00227-7

By:

Gao, Bo;
Zong, Wencheng;
Miskey, Csaba;
Ullah, Numan;
Diaby, Mohamed;
Chen, Cai;
Wang, Xiaoyan;
Ivics, Zoltán;
Song, Chengyi

Publication type:

Article

Correction to: Characterising a human endogenous retrovirus(HERV)-derived tumour-associated antigen: enriched RNA-Seq analysis of HERV-K(HML-2) in mantle cell lymphoma cell lines.

Published in:

2020

By:

Tatkiewicz, Witold;
Dickie, James;
Bedford, Franchesca;
Jones, Alexander;
Atkin, Mark;
Kiernan, Michele;
Maze, Emmanuel Atangana;
Agit, Bora;
Farnham, Garry;
Kanapin, Alexander;
Belshaw, Robert

Publication type:

Correction Notice

Characterisation of mobile genetic elements in Mycoplasma hominis with the description of ICEHo-II, a variant mycoplasma integrative and conjugative element.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00225-9

By:

Henrich, Birgit;
Hammerlage, Stephanie;
Scharf, Sebastian;
Haberhausen, Diana;
Fürnkranz, Ursula;
Köhrer, Karl;
Peitzmann, Lena;
Fiori, Pier Luigi;
Spergser, Joachim;
Pfeffer, Klaus;
Dilthey, Alexander T.

Publication type:

Article

Comprehensive genomic analysis reveals dynamic evolution of endogenous retroviruses that code for retroviral-like protein domains.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13100-020-00224-w

By:

Ueda, Mahoko Takahashi;
Kryukov, Kirill;
Mitsuhashi, Satomi;
Mitsuhashi, Hiroaki;
Imanishi, Tadashi;
Nakagawa, So

Publication type:

Article

Twenty years of transposable element analysis in the Arabidopsis thaliana genome.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00223-x

By:

Quesneville, Hadi

Publication type:

Article

Evolution of pogo, a separate superfamily of IS630-Tc1-mariner transposons, revealing recurrent domestication events in vertebrates.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00220-0

By:

Gao, Bo;
Wang, Yali;
Diaby, Mohamed;
Zong, Wencheng;
Shen, Dan;
Wang, Saisai;
Chen, Cai;
Wang, Xiaoyan;
Song, Chengyi

Publication type:

Article

LINE-1 ORF1p does not determine substrate preference for human/orangutan SVA and gibbon LAVA.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00222-y

By:

Damert, Annette

Publication type:

Article

Deep sequencing reveals new roles for MuB in transposition immunity and target-capture, and redefines the insular Ter region of E. coli.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00217-9

By:

Walker, David M.;
Harshey, Rasika M.

Publication type:

Article

Evolution of pogo, a separate superfamily of IS630-Tc1-mariner transposons, revealing recurrent domestication events in vertebrates.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00220-0

By:

Gao, Bo;
Wang, Yali;
Diaby, Mohamed;
Zong, Wencheng;
Shen, Dan;
Wang, Saisai;
Chen, Cai;
Wang, Xiaoyan;
Song, Chengyi

Publication type:

Article

IS982 and kin: new insights into an old IS family.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00221-z

By:

Fayad, Nancy;
Kallassy Awad, Mireille;
Mahillon, Jacques

Publication type:

Article

Transposable elements in Drosophila.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00213-z

By:

Mérel, Vincent;
Boulesteix, Matthieu;
Fablet, Marie;
Vieira, Cristina

Publication type:

Article

Identification and characterisation of endogenous Avian Leukosis Virus subgroup E (ALVE) insertions in chicken whole genome sequencing data.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00216-w

By:

Mason, Andrew S.;
Lund, Ashlee R.;
Hocking, Paul M.;
Fulton, Janet E.;
Burt, David W.

Publication type:

Article

Phylogenetic analysis of the Tc1/mariner superfamily reveals the unexplored diversity of pogo-like elements.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00212-0

By:

Dupeyron, Mathilde;
Baril, Tobias;
Bass, Chris;
Hayward, Alexander

Publication type:

Article

Transposons and satellite DNA: on the origin of the major satellite DNA family in the Chenopodium genome.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00219-7

By:

Belyayev, Alexander;
Josefiová, Jiřina;
Jandová, Michaela;
Mahelka, Václav;
Krak, Karol;
Mandák, Bohumil

Publication type:

Article

Transposable element abundance correlates with mode of transmission in microsporidian parasites.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00218-8

By:

de Albuquerque, Nathalia Rammé Medeiros;
Ebert, Dieter;
Haag, Karen Luisa

Publication type:

Article

Hagfish genome reveals parallel evolution of 7SL RNA-derived SINEs.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00210-2

By:

Kojima, Kenji K.

Publication type:

Article

Identification of RAG-like transposons in protostomes suggests their ancient bilaterian origin.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00214-y

By:

Martin, Eliza C.;
Vicari, Célia;
Tsakou-Ngouafo, Louis;
Pontarotti, Pierre;
Petrescu, Andrei J.;
Schatz, David G.

Publication type:

Article

AcademH, a lineage of Academ DNA transposons encoding helicase found in animals and fungi.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00211-1

By:

Kojima, Kenji K.

Publication type:

Article

Variation in base composition underlies functional and evolutionary divergence in non-LTR retrotransposons.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00209-9

By:

Ruggiero, Robert P.;
Boissinot, Stéphane

Publication type:

Article

The UCSC repeat browser allows discovery and visualization of evolutionary conflict across repeat families.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00208-w

By:

Fernandes, Jason D.;
Zamudio-Hurtado, Armando;
Clawson, Hiram;
Kent, W. James;
Haussler, David;
Salama, Sofie R.;
Haeussler, Maximilian

Publication type:

Article

Integrated Mobile Element Scanning (ME-Scan) method for identifying multiple types of polymorphic mobile element insertions.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00207-x

By:

Loh, Jui Wan;
Ha, Hongseok;
Lin, Timothy;
Sun, Nawei;
Burns, Kathleen H.;
Xing, Jinchuan

Publication type:

Article

Finding and extending ancient simple sequence repeat-derived regions in the human genome.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-00206-y

By:

Shortt, Jonathan A.;
Ruggiero, Robert P.;
Cox, Corey;
Wacholder, Aaron C.;
Pollock, David D.

Publication type:

Article

LUMI-PCR: an Illumina platform ligation-mediated PCR protocol for integration site cloning, provides molecular quantitation of integration sites.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-0201-4

By:

Dawes, Joanna C.;
Webster, Philip;
Iadarola, Barbara;
Garcia-Diaz, Claudia;
Dore, Marian;
Bolt, Bruce J.;
Dewchand, Hamlata;
Dharmalingam, Gopuraja;
McLatchie, Alex P.;
Kaczor, Jakub;
Caceres, Juan J.;
Paccanaro, Alberto;
Game, Laurence;
Parrinello, Simona;
Uren, Anthony G.

Publication type:

Article

Characterising a human endogenous retrovirus(HERV)-derived tumour-associated antigen: enriched RNA-Seq analysis of HERV-K(HML-2) in mantle cell lymphoma cell lines.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-0204-1

By:

Tatkiewicz, Witold;
Dickie, James;
Bedford, Franchesca;
Jones, Alexander;
Atkin, Mark;
Kiernan, Michele;
Maze, Emmanuel Atangana;
Agit, Bora;
Farnham, Garry;
Kanapin, Alexander;
Belshaw, Robert

Publication type:

Article

Integrating transposable elements in the 3D genome.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-0202-3

By:

Bousios, Alexandros;
Nützmann, Hans-Wilhelm;
Buck, Dorothy;
Michieletto, Davide

Publication type:

Article

Identification and characterization of ERV-W-like sequences in Platyrrhini species provides new insights into the evolutionary history of ERV-W in primates.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-0203-2

By:

Grandi, Nicole;
Pisano, Maria Paola;
Demurtas, Martina;
Blomberg, Jonas;
Magiorkinis, Gkikas;
Mayer, Jens;
Tramontano, Enzo

Publication type:

Article

Compensating for over-production inhibition of the Hsmar1 transposon in Escherichia coli using a series of constitutive promoters.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-020-0200-5

By:

Tellier, Michael;
Chalmers, Ronald

Publication type:

Article

SINE Retrotransposon variation drives Ecotypic disparity in natural populations of Coilia nasus.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-019-0198-8

By:

Liu, Dong;
Yang, Jinquan;
Tang, Wenqiao;
Zhang, Xing;
Royster, Clay Matthew;
Zhang, Ming

Publication type:

Article

Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study.

Published in:

2020

By:

Jedlicka, Pavel;
Lexa, Matej;
Vanat, Ivan;
Hobza, Roman;
Kejnovsky, Eduard

Publication type:

Correction Notice

Comparative analysis on the expression of L1 loci using various RNA-Seq preparations.

Published in:

Mobile DNA, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13100-019-0194-z

By:

Kaul, Tiffany;
Morales, Maria E.;
Sartor, Alton O.;
Belancio, Victoria P.;
Deininger, Prescott

Publication type:

Article