Works matching IS 17580463 AND DT 2015 AND VI 2015

Results: 118

LymPHOS 2.0: an update of a phosphosite database of primary human T cells.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav115
By:
- Tien Dung Nguyen;
- Vidal-Cortes, Oriol;
- Gallardo, Oscar;
- Abian, Joaquin;
- Carrascal, Montserrat
Publication type:
Article
HitPredict version 4: comprehensive reliability scoring of physical protein–protein interactions from more than 100 species.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav117
By:
- López, Yosvany;
- Nakai, Kenta;
- Patil, Ashwini
Publication type:
Article
SymbioGenomesDB: a database for the integration and access to knowledge on host–symbiont relationships.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav109
By:
- Reyes-Prieto, Mariana;
- Vargas-Chávez, Carlos;
- Latorre, Amparo;
- Moya, Andrés
Publication type:
Article
SBMDb: first whole genome putative microsatellite DNA marker database of sugarbeet for bioenergy and industrial applications.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav111
By:
- Iquebal, Mir Asif;
- Jaiswal, Sarika;
- Angadi, U. B.;
- Sablok, Gaurav;
- Arora, Vasu;
- Kumar, Sunil;
- Rai, Anil;
- Kumar, Dinesh
Publication type:
Article
Kiwifruit Information Resource (KIR): a comparative platform for kiwifruit genomics.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav113
By:
- Junyang Yue;
- Jian Liu;
- Rongjun Ban;
- Wei Tang;
- Lin Deng;
- Zhangjun Fei;
- Yongsheng Liu
Publication type:
Article
ONRLDB—manually curated database of experimentally validated ligands for orphan nuclear receptors: insights into new drug discovery.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav112
By:
- Nanduri, Ravikanth;
- Bhutani, Isha;
- Somavarapu, Arun Kumar;
- Mahajan, Sahil;
- Parkesh, Raman;
- Gupta, Pawan
Publication type:
Article
Biocuration with insufficient resources and fixed timelines.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav116
By:
- Rodriguez-Esteban, Raul
Publication type:
Article
NeuroTransDB: highly curated and structured transcriptomic metadata for neurodegenerative diseases.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav099
By:
- Bagewadi, Shweta;
- Adhikari, Subash;
- Dhrangadhariya, Anjani;
- Irin, Afroza Khanam;
- Ebeling, Christian;
- Namasivayam, Aishwarya Alex;
- Page, Matthew;
- Hofmann-Apitius, Martin;
- Senger, Philipp
Publication type:
Article
Differential ligand-signaling network of CCL19/CCL21-CCR7 system.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav106
By:
- Raju, Rajesh;
- Gadakh, Sachin;
- Gopal, Priyanka;
- George, Bijesh;
- Advani, Jayshree;
- Soman, Sowmya;
- Prasad, T. S. K.;
- Girijadevi, Reshmi
Publication type:
Article
Brassica database (BRAD) version 2.0: integrating and mining Brassicaceae species genomic resources.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav093
By:
- Xiaobo Wang;
- Jian Wu;
- Jianli Liang;
- Feng Cheng;
- Xiaowu Wang
Publication type:
Article
ERAIZDA: a model for holistic annotation of animal infectious and zoonotic diseases.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav110
By:
- Buza, Teresia M.;
- Jack, Sherman W.;
- Kirunda, Halid;
- Khaitsa, Margaret L.;
- Lawrence, Mark L.;
- Pruett, Stephen;
- Peterson, Daniel G.
Publication type:
Article
MAPanalyzer: a novel online tool for analyzing microtubule-associated proteins.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav108
By:
- Yuan Zhou;
- Shiping Yang;
- Tonglin Mao;
- Ziding Zhang
Publication type:
Article
BaMBa: towards the integrated management of Brazilian marine environmental data.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav088
By:
- Milet Meirelles, Pedro;
- Gadelha Jr., Luiz M. R.;
- Bastos Francini-Filho, Ronaldo;
- Leão de Moura, Rodrigo;
- Menezes Amado-Filho, Gilberto;
- Cardoso Bastos, Alex;
- Pinheiro da Rocha Paranhos, Rodolfo;
- Eduardo Rezende, Carlos;
- Swings, Jean;
- Siegle, Eduardo;
- Asp Neto, Nils Edvin;
- Neumann Leitão, Sigrid;
- Coutinho, Ricardo;
- Mattoso, Marta;
- Salomon, Paulo S.;
- Valle, Rogério A. B.;
- Crespo Pereira, Renato;
- Henrique Kruger, Ricardo;
- Thompson, Cristiane;
- Thompson, Fabiano L.
Publication type:
Article
PhenoMiner: from text to a database of phenotypes associated with OMIM diseases.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav104
By:
- Collier, Nigel;
- Groza, Tudor;
- Smedley, Damian;
- Robinson, Peter N.;
- Oellrich, Anika;
- Rebholz-Schuhmann, Dietrich
Publication type:
Article
Developing the eHistology Atlas.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav105
By:
- Richardson, Lorna;
- Graham, Liz;
- Moss, Julie;
- Burton, Nick;
- Roochun, Yogmatee;
- Armit, Chris;
- Baldock, Richard A.
Publication type:
Article
Corrigendum: Automated semantic annotation of rare disease cases: a case study.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav107
Publication type:
Article
LocSigDB: a database of protein localization signals.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav003
By:
- Negi, Simarjeet;
- Pandey, Sanjit;
- Srinivasan, Satish M.;
- Mohammed, Akram;
- Guda, Chittibabu
Publication type:
Article
GraP: platform for functional genomics analysis of Gossypium raimondii.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav047
By:
- Liwei Zhang;
- Jinyan Guo;
- Qi You;
- Xin Yi;
- Yi Ling;
- Wenying Xu;
- Jinping Hua;
- Zhen Su
Publication type:
Article
SCAN database: facilitating integrative analyses of cytosine modification and expression QTL.
Published in:
2015
By:
- Wei Zhang;
- Gamazon, Eric R.;
- Xu Zhang;
- Konkashbaev, Anuar;
- Cong Liu;
- Szilágyi, Keely L.;
- Dolan, M. Eileen;
- Cox, Nancy J.
Publication type:
Product Review
Generating a focused view of disease ontology cancer terms for pan-cancer data integration and analysis.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav032
By:
- Tsung-Jung Wu;
- Schriml, Lynn M.;
- Qing-Rong Chen;
- Colbert, Maureen;
- Crichton, Daniel J.;
- Finney, Richard;
- Ying Hu;
- Kibbe, Warren A.;
- Kincaid, Heather;
- Meerzaman, Daoud;
- Mitraka, Elvira;
- Yang Pan;
- Smith, Krista M.;
- Srivastava, Sudhir;
- Ward, Sari;
- Cheng Yan;
- Mazumder, Raja
Publication type:
Article
ProPepper: a curated database for identification and analysis of peptide and immune-responsive epitope composition of cereal grain protein families.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav100
By:
- Juhász, Angéla;
- Haraszi, Réka;
- Maulis, Csaba
Publication type:
Article
WaspAtlas: a Nasonia vitripennis gene database and analysis platform.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav103
By:
- Davies, Nathaniel J.;
- Tauber, Eran
Publication type:
Article
CRCDA—Comprehensive resources for cancer NGS data analysis.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav092
By:
- Thangam, Manonanthini;
- Gopal, Ramesh Kumar
Publication type:
Article
MtiBase: a database for decoding microRNA target sites located within CDS and 5'UTR regions from CLIP-Seq and expression profile datasets.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav102
By:
- Zhi-Wei Guo;
- Chen Xie;
- Jian-Rong Yang;
- Jun-Hao Li;
- Jian-Hua Yang;
- Limin Zheng
Publication type:
Article
Sample data processing in an additive and reproducible taxonomic workflow by using character data persistently linked to preserved individual specimens.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav094
By:
- Kilian, Norbert;
- Henning, Tilo;
- Plitzner, Patrick;
- Müller, Andreas;
- Güntsch, Anton;
- Stöver, Ben C.;
- Müller, Kai F.;
- Berendsohn, Walter G.;
- Borsch, Thomas
Publication type:
Article
RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav095
By:
- Zhi-Ping Liu;
- Canglin Wu;
- Hongyu Miao;
- Hulin Wu
Publication type:
Article
miRSponge: a manually curated database for experimentally supported miRNA sponges and ceRNAs.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav098
By:
- Peng Wang;
- Hui Zhi;
- Yunpeng Zhang;
- Yue Liu;
- Jizhou Zhang;
- Yue Gao;
- Maoni Guo;
- Shangwei Ning;
- Xia Li
Publication type:
Article
MGDB: a comprehensive database of genes involved in melanoma.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav097
By:
- Di Zhang;
- Rongrong Zhu;
- Hanqian Zhang;
- Chun-Hou Zheng;
- Junfeng Xia
Publication type:
Article
JRC GMO-Amplicons: a collection of nucleic acid sequences related to genetically modified organisms.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav101
By:
- Petrillo, Mauro;
- Angers-Loustau, Alexandre;
- Henriksson, Peter;
- Bonfini, Laura;
- Patak, Alex;
- Kreysa, Joachim
Publication type:
Article
Comprehensive comparative homeobox gene annotation in human and mouse.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav091
By:
- Wilming, Laurens G.;
- Boychenko, Veronika;
- Harrow, Jennifer L.
Publication type:
Article
ChloroMitoSSRDB 2.00: more genomes, more repeats, unifying SSRs search patterns and on-the-fly repeat detection.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav084
By:
- Sablok, Gaurav;
- Raju, G. V. Padma;
- Mudunuri, Suresh B.;
- Prabha, Ratna;
- Singh, Dhananjaya P.;
- Baev, Vesselin;
- Yahubyan, Galina;
- Ralph, Peter J.;
- La Porta, Nicola
Publication type:
Article
SORTA: a system for ontology-based re-coding and technical annotation of biomedical phenotype data.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav089
By:
- Chao Pang;
- Sollie, Annet;
- Sijtsma, Anna;
- Hendriksen, Dennis;
- Charbon, Bart;
- de Haan, Mark;
- de Boer, Tommy;
- Kelpin, Fleur;
- Jetten, Jonathan;
- van der Velde, Joeri K.;
- Smidt, Nynke;
- Sijmons, Rolf;
- Hillege, Hans;
- Swertz, Morris A.
Publication type:
Article
Drug-Path: a database for drug-induced pathways.
Published in:
2015
By:
- Hui Zeng;
- Chengxiang Qiu;
- Qinghua Cui
Publication type:
Product Review
FARE-CAFE: a database of functional and regulatory elements of cancer-associated fusion events.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav086
By:
- Korla, Praveen Kumar;
- Jack Cheng;
- Chien-Hung Huang;
- Tsai, Jeffrey J. P.;
- Yu-Hsuan Liu;
- Kurubanjerdjit, Nilubon;
- Wen-Tsong Hsieh;
- Huey-Yi Chen;
- Ka-Lok Ng
Publication type:
Article
Deep Question Answering for protein annotation.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav081
By:
- Gobeill, Julien;
- Gaudinat, Arnaud;
- Pasche, Emilie;
- Vishnyakova, Dina;
- Gaudet, Pascale;
- Bairoch, Amos;
- Ruch, Patrick
Publication type:
Article
Connecting proteins with drug-like compounds: Open source drug discovery workflows with BindingDB and KNIME.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav087
By:
- Nicola, George;
- Berthold, Michael R.;
- Hedrick, Michael P.;
- Gilson, Michael K.
Publication type:
Article
LncReg: a reference resource for lncRNA-associated regulatory networks.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav083
By:
- Zhong Zhou;
- Yi Shen;
- Khan, Muhammad Riaz;
- Ao Li
Publication type:
Article
Co-LncRNA: investigating the lncRNA combinatorial effects in GO annotations and KEGG pathways based on human RNA-Seq data.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav082
By:
- Zheng Zhao;
- Jing Bai;
- Aiwei Wu;
- Yuan Wang;
- Jinwen Zhang, \;
- Zishan Wang;
- Yongsheng Li;
- Juan Xu;
- Xia Li
Publication type:
Article
DENdb: database of integrated human enhancers.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav085
By:
- Ashoor, Haitham;
- Kleftogiannis, Dimitrios;
- Radovanovic, Aleksandar;
- Bajic, Vladimir B.
Publication type:
Article
Carbohydrate Structure Database: tools for statistical analysis of bacterial, plant and fungal glycomes.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav073
By:
- Egorova, K. S.;
- Kondakova, A. N.;
- Toukach, Ph. V.
Publication type:
Article
FlyVar: a database for genetic variation in Drosophila melanogaster.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav079
By:
- Fei Wang;
- Lichun Jiang;
- Yong Chen;
- Haelterman, Nele A.;
- Bellen, Hugo J.;
- Rui Chen
Publication type:
Article
CicArVarDB: SNP and InDel database for advancing genetics research and breeding applications in chickpea.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav078
By:
- Doddamani, Dadakhalandar;
- Khan, Aamir W.;
- Katta, Mohan A. V. S. K.;
- Agarwal, Gaurav;
- Thudi, Mahendar;
- Ruperao, Pradeep;
- Edwards, David;
- Varshney, Rajeev K.
Publication type:
Article
MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav080
By:
- Boeuf, Dominique;
- Audic, Stéphane;
- Brillet-Guéguen, Loraine;
- Caron, Christophe;
- Jeanthon, Christian
Publication type:
Article
Phytochemica: a platform to explore phytochemicals of medicinal plants.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav075
By:
- Pathania, Shivalika;
- Ramakrishnan, Sai Mukund;
- Bagler, Ganesh
Publication type:
Article
MetazSecKB: the human and animal secretome and subcellular proteome knowledgebase.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav077
By:
- Meinken, John;
- Walker, Gary;
- Cooper, Chester R.;
- Xiang Jia Min
Publication type:
Article
MESSI: metabolic engineering target selection and best strain identification tool.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav076
By:
- Kang Kang;
- Jun Li;
- Boon Leong Lim;
- Panagiotou, Gianni
Publication type:
Article
PTGBase: an integrated database to study tandem duplicated genes in plants.
Published in:
2015
By:
- Jingyin Yu;
- Tao Ke;
- Tehrim, Sadia;
- Fengming Sun;
- Boshou Liao;
- Wei Hua
Publication type:
Product Review
Automatic concept recognition using the Human Phenotype Ontology reference and test suite corpora.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav005
By:
- Groza, Tudor;
- Köhler, Sebastian;
- Doelken, Sandra;
- Collier, Nigel;
- Oellrich, Anika;
- Smedley, Damian;
- Couto, Francisco M.;
- Baynam, Gareth;
- Zankl, Andreas;
- Robinson, Peter N.
Publication type:
Article
CyanOmics: an integrated database of omics for the model cyanobacterium Synechococcus sp. PCC 7002.
Published in:
2015
By:
- Yaohua Yang;
- Jie Feng;
- Tao Li;
- Feng Ge;
- Jindong Zhao
Publication type:
Product Review
NeuroPep: a comprehensive resource of neuropeptides.
Published in:
Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav038
By:
- Yan Wang;
- Mingxia Wang;
- Sanwen Yin;
- Jang, Richard;
- Jian Wang;
- Zhidong Xue;
- Tao Xu
Publication type:
Article