Works matching IS 17560381 AND DT 2024 AND VI 17 AND IP 1

Results: 60

Correction: Detection and classification of long terminal repeat sequences in plant LTR-retrotransposons and their analysis using explainable machine learning.

Published in:

2024

By:

Horvath, Jakub;
Jedlicka, Pavel;
Kratka, Marie;
Kubat, Zdenek;
Kejnovsky, Eduard;
Lexa, Matej

Publication type:

Correction Notice

Distinct network patterns emerge from Cartesian and XOR epistasis models: a comparative network science analysis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00413-w

By:

Sha, Zhendong;
Freda, Philip J.;
Bhandary, Priyanka;
Ghosh, Attri;
Matsumoto, Nicholas;
Moore, Jason H.;
Hu, Ting

Publication type:

Article

Pathway metrics accurately stratify T cells to their cells states.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00416-7

By:

Livne, Dani;
Efroni, Sol

Publication type:

Article

Exploring glioma heterogeneity through omics networks: from gene network discovery to causal insights and patient stratification.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00411-y

By:

Kastendiek, Nina;
Coletti, Roberta;
Gross, Thilo;
Lopes, Marta B.

Publication type:

Article

Detection and classification of long terminal repeat sequences in plant LTR-retrotransposons and their analysis using explainable machine learning.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00410-z

By:

Horvath, Jakub;
Jedlicka, Pavel;
Kratka, Marie;
Kubat, Zdenek;
Kejnovsky, Eduard;
Lexa, Matej

Publication type:

Article

Comparing new tools of artificial intelligence to the authentic intelligence of our global health students.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00408-7

By:

Thandla, Shilpa R.;
Armstrong, Grace Q.;
Menon, Adil;
Shah, Aashna;
Gueye, David L.;
Harb, Clara;
Hernandez, Estefania;
Iyer, Yasaswini;
Hotchner, Abigail R.;
Modi, Riddhi;
Mudigonda, Anusha;
Prokos, Maria A.;
Rao, Tharun M.;
Thomas, Olivia R.;
Beltran, Camilo A.;
Guerrieri, Taylor;
LeBlanc, Sydney;
Moorthy, Skanda;
Yacoub, Sara G.;
Gardner, Jacob E.

Publication type:

Article

Prognostic feature based on androgen-responsive genes in bladder cancer and screening for potential targeted drugs.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00377-x

By:

Zhao, Jiang;
Zhang, Qian;
Zhu, Cunle;
Yuqi, Wu;
Zhang, Guohui;
Wang, Qianliang;
Dong, Xingyou;
Li, Benyi;
Wang, Xiangwei

Publication type:

Article

TGNet: tensor-based graph convolutional networks for multimodal brain network analysis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00409-6

By:

Kong, Zhaoming;
Zhou, Rong;
Luo, Xinwei;
Zhao, Songlin;
Ragin, Ann B.;
Leow, Alex D.;
He, Lifang

Publication type:

Article

Predictive modeling of ALS progression: an XGBoost approach using clinical features.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00399-5

By:

Gupta, Richa;
Bhandari, Mansi;
Grover, Anhad;
Al-shehari, Taher;
Kadrie, Mohammed;
Alfakih, Taha;
Alsalman, Hussain

Publication type:

Article

Deep learning-based Emergency Department In-hospital Cardiac Arrest Score (Deep EDICAS) for early prediction of cardiac arrest and cardiopulmonary resuscitation in the emergency department.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00407-8

By:

Deng, Yuan-Xiang;
Wang, Jyun-Yi;
Ko, Chia-Hsin;
Huang, Chien-Hua;
Tsai, Chu-Lin;
Fu, Li-Chen

Publication type:

Article

Supervised multiple kernel learning approaches for multi-omics data integration.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00406-9

By:

Briscik, Mitja;
Tazza, Gabriele;
Vidács, László;
Dillies, Marie-Agnès;
Déjean, Sébastien

Publication type:

Article

Transcriptome-based network analysis related to regulatory T cells infiltration identified RCN1 as a potential biomarker for prognosis in clear cell renal cell carcinoma.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00404-x

By:

Qixin, Yang;
Jing, Huang;
Jiang, He;
Xueyang, Liu;
Lu, Yu;
Yuehua, Li

Publication type:

Article

Investigating potential drug targets for IgA nephropathy and membranous nephropathy through multi-queue plasma protein analysis: a Mendelian randomization study based on SMR and co-localization analysis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00405-w

By:

Xu, Xinyi;
Miao, Changhong;
Yang, Shirui;
Xiao, Lu;
Gao, Ying;
Wu, Fangying;
Xu, Jianbo

Publication type:

Article

Deciphering the tissue-specific functional effect of Alzheimer risk SNPs with deep genome annotation.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00400-1

By:

Pugalenthi, Pradeep Varathan;
He, Bing;
Xie, Linhui;
Nho, Kwangsik;
Saykin, Andrew J.;
Yan, Jingwen

Publication type:

Article

Deep joint learning diagnosis of Alzheimer's disease based on multimodal feature fusion.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00395-9

By:

Wang, Jingru;
Wen, Shipeng;
Liu, Wenjie;
Meng, Xianglian;
Jiao, Zhuqing

Publication type:

Article

Modeling heterogeneity of Sudanese hospital stay in neonatal and maternal unit: non-parametric random effect models with Gamma distribution.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00403-y

By:

Almohaimeed, Amani;
Adam, Ishag

Publication type:

Article

Ensemble feature selection and tabular data augmentation with generative adversarial networks to enhance cutaneous melanoma identification and interpretability.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00397-7

By:

Gómez-Martínez, Vanesa;
Chushig-Muzo, David;
Veierød, Marit B.;
Granja, Conceição;
Soguero-Ruiz, Cristina

Publication type:

Article

Priority-Elastic net for binary disease outcome prediction based on multi-omics data.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00401-0

By:

Musib, Laila;
Coletti, Roberta;
Lopes, Marta B.;
Mouriño, Helena;
Carrasquinha, Eunice

Publication type:

Article

A regularized Cox hierarchical model for incorporating annotation information in predictive omic studies.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00398-6

By:

Shen, Dixin;
Lewinger, Juan Pablo;
Kawaguchi, Eric

Publication type:

Article

G4 & the balanced metric family – a novel approach to solving binary classification problems in medical device validation & verification studies.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00402-z

By:

Marra, Andrew

Publication type:

Article

From COVID-19 to monkeypox: a novel predictive model for emerging infectious diseases.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00396-8

By:

Xu, Deren;
Chan, Weng Howe;
Haron, Habibollah;
Nies, Hui Wen;
Moorthy, Kohbalan

Publication type:

Article

PAGER: A novel genotype encoding strategy for modeling deviations from additivity in complex trait association studies.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00393-x

By:

Freda, Philip J.;
Ghosh, Attri;
Bhandary, Priyanka;
Matsumoto, Nicholas;
Chitre, Apurva S.;
Zhou, Jiayan;
Hall, Molly A.;
Palmer, Abraham A.;
Obafemi-Ajayi, Tayo;
Moore, Jason H.

Publication type:

Article

Decoding the genetic comorbidity network of Alzheimer's disease.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00394-w

By:

Zhang, Xueli;
Li, Dantong;
Ye, Siting;
Liu, Shunming;
Ma, Shuo;
Li, Min;
Peng, Qiliang;
Hu, Lianting;
Shang, Xianwen;
He, Mingguang;
Zhang, Lei

Publication type:

Article

MDVarP: modifier ~ disease-causing variant pairs predictor.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00392-y

By:

Sun, Hong;
Chen, Yunqin;
Ma, Liangxiao

Publication type:

Article

Deep learning-based approaches for multi-omics data integration and analysis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00391-z

By:

Ballard, Jenna L.;
Wang, Zexuan;
Li, Wenrui;
Shen, Li;
Long, Qi

Publication type:

Article

Assessing the limitations of relief-based algorithms in detecting higher-order interactions.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00390-0

By:

Freda, Philip J.;
Ye, Suyu;
Zhang, Robert;
Moore, Jason H.;
Urbanowicz, Ryan J.

Publication type:

Article

Identifying heterogeneous subgroups of systemic autoimmune diseases by applying a joint dimension reduction and clustering approach to immunomarkers.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00389-7

By:

Chang, Chia-Wei;
Wang, Hsin-Yao;
Lin, Wan-Ying;
Wang, Yu-Chiang;
Lo, Wei-Lin;
Lin, Ting-Wei;
Yu, Jia-Ruei;
Tseng, Yi-Ju

Publication type:

Article

Development, evaluation and comparison of machine learning algorithms for predicting in-hospital patient charges for congestive heart failure exacerbations, chronic obstructive pulmonary disease exacerbations and diabetic ketoacidosis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00387-9

By:

Arnold, Monique;
Liou, Lathan;
Boland, Mary Regina

Publication type:

Article

Private pathological assessment via machine learning and homomorphic encryption.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00379-9

By:

Al Badawi, Ahmad;
Faizal Bin Yusof, Mohd

Publication type:

Article

Enhanced labor pain monitoring using machine learning and ECG waveform analysis for uterine contraction-induced pain.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00383-z

By:

Chu, Yuan-Chia;
Chen, Saint Shiou-Sheng;
Chen, Kuen-Bao;
Sun, Jui-Sheng;
Shen, Tzu-Kuei;
Chen, Li-Kuei

Publication type:

Article

The goldmine of GWAS summary statistics: a systematic review of methods and tools.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00385-x

By:

Kontou, Panagiota I.;
Bagos, Pantelis G.

Publication type:

Article

QIGTD: identifying critical genes in the evolution of lung adenocarcinoma with tensor decomposition.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00386-w

By:

Chen, Bolin;
Zhang, Jinlei;
Shao, Ci;
Bian, Jun;
Kang, Ruiming;
Shang, Xuequn

Publication type:

Article

Processing imbalanced medical data at the data level with assisted-reproduction data as an example.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00384-y

By:

Zhu, Junliang;
Pu, Shaowei;
He, Jiaji;
Su, Dongchao;
Cai, Weijie;
Xu, Xueying;
Liu, Hongbo

Publication type:

Article

Seven quick tips for gene-focused computational pangenomic analysis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00380-2

By:

Bonnici, Vincenzo;
Chicco, Davide

Publication type:

Article

Deep learning for automatic calcium detection in echocardiography.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00381-1

By:

Elvas, Luís B.;
Gomes, Sara;
Ferreira, João C.;
Rosário, Luís Brás;
Brandão, Tomás

Publication type:

Article

Integrating transcriptomics and proteomics to analyze the immune microenvironment of cytomegalovirus associated ulcerative colitis and identify relevant biomarkers.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00382-0

By:

Chen, Yang;
Zheng, Qingqing;
Wang, Hui;
Tang, Peiren;
Deng, Li;
Li, Pu;
Li, Huan;
Hou, Jianhong;
Li, Jie;
Wang, Li;
Peng, Jun

Publication type:

Article

Understanding predictions of drug profiles using explainable machine learning models.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00378-w

By:

König, Caroline;
Vellido, Alfredo

Publication type:

Article

Modelling the nicotine pharmacokinetic profile for e-cigarettes using real time monitoring of consumers' physiological measurements and mouth level exposure.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00375-z

By:

Prasad, Krishna;
Griffiths, Allen;
Agrawal, Kavya;
McEwan, Michael;
Macci, Flavio;
Ghisoni, Marco;
Stopher, Matthew;
Napleton, Matthew;
Strickland, Joel;
Keating, David;
Whitehead, Thomas;
Conduit, Gareth;
Murray, Stacey;
Edward, Lauren

Publication type:

Article

Construction and application of medication reminder system: intelligent generation of universal medication schedule.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00376-y

By:

Huang, Hangxing;
Zhang, Lu;
Yang, Yongyu;
Huang, Ling;
Lu, Xikui;
Li, Jingyang;
Yu, Huimin;
Cheng, Shuqiao;
Xiao, Jian

Publication type:

Article

Building RadiologyNET: an unsupervised approach to annotating a large-scale multimodal medical database.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00373-1

By:

Napravnik, Mateja;
Hržić, Franko;
Tschauner, Sebastian;
Štajduhar, Ivan

Publication type:

Article

Transcriptome- and DNA methylation-based cell-type deconvolutions produce similar estimates of differential gene expression and differential methylation.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00374-0

By:

Hannon, Emily R.;
Marsit, Carmen J.;
Dent, Arlene E.;
Embury, Paula;
Ogolla, Sidney;
Midem, David;
Williams, Scott M.;
Kazura, James W.

Publication type:

Article

Identification of immune-associated biomarkers of diabetes nephropathy tubulointerstitial injury based on machine learning: a bioinformatics multi-chip integrated analysis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00369-x

By:

Wang, Lin;
Su, Jiaming;
Liu, Zhongjie;
Ding, Shaowei;
Li, Yaotan;
Hou, Baoluo;
Hu, Yuxin;
Dong, Zhaoxi;
Tang, Jingyi;
Liu, Hongfang;
Liu, Weijing

Publication type:

Article

Electronic medical records imputation by temporal Generative Adversarial Network.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00372-2

By:

Yin, Yunfei;
Yuan, Zheng;
Tanvir, Islam Md;
Bao, Xianjian

Publication type:

Article

Saliency-driven explainable deep learning in medical imaging: bridging visual explainability and statistical quantitative analysis.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00370-4

By:

Brima, Yusuf;
Atemkeng, Marcellin

Publication type:

Article

Using GPT-4 to write a scientific review article: a pilot evaluation study.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00371-3

By:

Wang, Zhiping Paul;
Bhandary, Priyanka;
Wang, Yizhou;
Moore, Jason H.

Publication type:

Article

Minimization of occurrence of retained surgical items using machine learning and deep learning techniques: a review.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00367-z

By:

Abo-Zahhad, Mohammed;
El-Malek, Ahmed H. Abd;
Sayed, Mohammed S.;
Gitau, Susan Njeri

Publication type:

Article

MOCAT: multi-omics integration with auxiliary classifiers enhanced autoencoder.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00360-6

By:

Yao, Xiaohui;
Jiang, Xiaohan;
Luo, Haoran;
Liang, Hong;
Ye, Xiufen;
Wei, Yanhui;
Cong, Shan

Publication type:

Article

Unveiling wearables: exploring the global landscape of biometric applications and vital signs and behavioral impact.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00368-y

By:

Del-Valle-Soto, Carolina;
Briseño, Ramon A.;
Valdivia, Leonardo J.;
Nolazco-Flores, Juan Arturo

Publication type:

Article

The biomedical knowledge graph of symptom phenotype in coronary artery plaque: machine learning-based analysis of real-world clinical data.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00365-1

By:

Huan, Jia-Ming;
Wang, Xiao-Jie;
Li, Yuan;
Zhang, Shi-Jun;
Hu, Yuan-Long;
Li, Yun-Lun

Publication type:

Article

Machine-learning-based models to predict cardiovascular risk using oculomics and clinic variables in KNHANES.

Published in:

BioData Mining, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13040-024-00363-3

By:

Zhang, Yuqi;
Li, Sijin;
Wu, Weijie;
Zhao, Yanqing;
Han, Jintao;
Tong, Chao;
Luo, Niansang;
Zhang, Kun

Publication type:

Article