Works matching IS 17560381 AND DT 2021 AND VI 14 AND IP 1

Results: 52

Machine learning approaches for the genomic prediction of rheumatoid arthritis and systemic lupus erythematosus.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00284-5

By:

Chung, Chih-Wei;
Hsiao, Tzu-Hung;
Huang, Chih-Jen;
Chen, Yen-Ju;
Chen, Hsin-Hua;
Lin, Ching-Heng;
Chou, Seng-Cho;
Chen, Tzer-Shyong;
Chung, Yu-Fang;
Yang, Hwai-I;
Chen, Yi-Ming

Publication type:

Article

Identification of natural selection in genomic data with deep convolutional neural network.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00280-9

By:

Nguembang Fadja, Arnaud;
Riguzzi, Fabrizio;
Bertorelle, Giorgio;
Trucchi, Emiliano

Publication type:

Article

LPI-EnEDT: an ensemble framework with extra tree and decision tree classifiers for imbalanced lncRNA-protein interaction data classification.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00277-4

By:

Peng, Lihong;
Yuan, Ruya;
Shen, Ling;
Gao, Pengfei;
Zhou, Liqian

Publication type:

Article

Gaussian noise up-sampling is better suited than SMOTE and ADASYN for clinical decision making.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00283-6

By:

Beinecke, Jacqueline;
Heider, Dominik

Publication type:

Article

Prediction of short-term mortality in acute heart failure patients using minimal electronic health record data.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00255-w

By:

Radhachandran, Ashwath;
Garikipati, Anurag;
Zelin, Nicole S.;
Pellegrini, Emily;
Ghandian, Sina;
Calvert, Jacob;
Hoffman, Jana;
Mao, Qingqing;
Das, Ritankar

Publication type:

Article

New neural network classification method for individuals ancestry prediction from SNPs data.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00258-7

By:

Soumare, H.;
Rezgui, S.;
Gmati, N.;
Benkahla, A.

Publication type:

Article

A prognostic model based on seven immune-related genes predicts the overall survival of patients with hepatocellular carcinoma.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00261-y

By:

Yan, Qian;
Zheng, Wenjiang;
Wang, Boqing;
Ye, Baoqian;
Luo, Huiyan;
Yang, Xinqian;
Zhang, Ping;
Wang, Xiongwen

Publication type:

Article

Development of glaucoma predictive model and risk factors assessment based on supervised models.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00281-8

By:

Sharifi, Mahyar;
Khatibi, Toktam;
Emamian, Mohammad Hassan;
Sadat, Somayeh;
Hashemi, Hassan;
Fotouhi, Akbar

Publication type:

Article

Correction to: iGlioSub: an integrative transcriptomic and epigenomic classifier for glioblastoma molecular subtypes.

Published in:

2021

By:

Ensenyat-Mendez, Miquel;
Íñiguez-Muñoz, Sandra;
Sesé, Borja;
Marzese, Diego M.

Publication type:

Correction Notice

iGlioSub: an integrative transcriptomic and epigenomic classifier for glioblastoma molecular subtypes.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00282-7

By:

Ensenyat-Mendez, Miquel;
Íñiguez-Muñoz, Sandra;
Sesé, Borja;
Marzese, Diego M.

Publication type:

Article

Prediction of synergistic drug combinations using PCA-initialized deep learning.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00278-3

By:

Ma, Jun;
Motsinger-Reif, Alison

Publication type:

Article

Humans and machines in biomedical knowledge curation: hypertrophic cardiomyopathy molecular mechanisms' representation.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00279-2

By:

Glavaški, Mila;
Velicki, Lazar

Publication type:

Article

Evaluation of different approaches for missing data imputation on features associated to genomic data.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00274-7

By:

Petrazzini, Ben Omega;
Naya, Hugo;
Lopez-Bello, Fernando;
Vazquez, Gustavo;
Spangenberg, Lucía

Publication type:

Article

Taxonomy-based data representation for data mining: an example of the magnitude of risk associated with H. pylori infection.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00271-w

By:

Polaka, Inese;
Razuka-Ebela, Danute;
Park, Jin Young;
Leja, Marcis

Publication type:

Article

iGlioSub: an integrative transcriptomic and epigenomic classifier for glioblastoma molecular subtypes.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00282-7

By:

Ensenyat-Mendez, Miquel;
Íñiguez-Muñoz, Sandra;
Sesé, Borja;
Marzese, Diego M.

Publication type:

Article

Comparison of 16S and whole genome dog microbiomes using machine learning.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00270-x

By:

Lewis, Scott;
Nash, Andrea;
Li, Qinghong;
Ahn, Tae-Hyuk

Publication type:

Article

Development and validation of a novel blending machine learning model for hospital mortality prediction in ICU patients with Sepsis.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00276-5

By:

Zeng, Zhixuan;
Yao, Shuo;
Zheng, Jianfei;
Gong, Xun

Publication type:

Article

Prediction of MoRFs based on sequence properties and convolutional neural networks.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00275-6

By:

He, Hao;
Zhou, Yatong;
Chi, Yue;
He, Jingfei

Publication type:

Article

Probability calibration-based prediction of recurrence rate in patients with diffuse large B-cell lymphoma.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00272-9

By:

Fan, Shuanglong;
Zhao, Zhiqiang;
Zhang, Yanbo;
Yu, Hongmei;
Zheng, Chuchu;
Huang, Xueqian;
Yang, Zhenhuan;
Xing, Meng;
Lu, Qing;
Luo, Yanhong

Publication type:

Article

Personalized single-cell networks: a framework to predict the response of any gene to any drug for any patient.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00263-w

By:

Harikumar, Haripriya;
Quinn, Thomas P.;
Rana, Santu;
Gupta, Sunil;
Venkatesh, Svetha

Publication type:

Article

GenoVault: a cloud based genomics repository.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00268-5

By:

Jain, Sankalp;
Saxena, Amit;
Hesarur, Suprit;
Bhadhadhara, Kirti;
Bharti, Neeraj;
Kasibhatla, Sunitha Manjari;
Sonavane, Uddhavesh;
Joshi, Rajendra

Publication type:

Article

Biological knowledge-slanted random forest approach for the classification of calcified aortic valve stenosis.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00269-4

By:

Cantor, Erika;
Salas, Rodrigo;
Rosas, Harvey;
Guauque-Olarte, Sandra

Publication type:

Article

Evaluating risk detection methods to uncover ontogenic-mediated adverse drug effect mechanisms in children.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00264-9

By:

Giangreco, Nicholas P.;
Tatonetti, Nicholas P.

Publication type:

Article

Machine-learning based feature selection for a non-invasive breathing change detection.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00265-8

By:

Pegoraro, Juliana Alves;
Lavault, Sophie;
Wattiez, Nicolas;
Similowski, Thomas;
Gonzalez-Bermejo, Jésus;
Birmelé, Etienne

Publication type:

Article

eQTpLot: a user-friendly R package for the visualization of colocalization between eQTL and GWAS signals.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00267-6

By:

Drivas, Theodore G.;
Lucas, Anastasia;
Ritchie, Marylyn D.

Publication type:

Article

A new pipeline for structural characterization and classification of RNA-Seq microbiome data.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00266-7

By:

Racedo, Sebastian;
Portnoy, Ivan;
Vélez, Jorge I.;
San-Juan-Vergara, Homero;
Sanjuan, Marco;
Zurek, Eduardo

Publication type:

Article

A maximum flow-based network approach for identification of stable noncoding biomarkers associated with the multigenic neurological condition, autism.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00262-x

By:

Varma, Maya;
Paskov, Kelley M.;
Chrisman, Brianna S.;
Sun, Min Woo;
Jung, Jae-Yoon;
Stockham, Nate T.;
Washington, Peter Y.;
Wall, Dennis P.

Publication type:

Article

Estimating sequencing error rates using families.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00259-6

By:

Paskov, Kelley;
Jung, Jae-Yoon;
Chrisman, Brianna;
Stockham, Nate T.;
Washington, Peter;
Varma, Maya;
Sun, Min Woo;
Wall, Dennis P.

Publication type:

Article

Machine learning and statistical approaches for classification of risk of coronary artery disease using plasma cytokines.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00260-z

By:

Saharan, Seema Singh;
Nagar, Pankaj;
Creasy, Kate Townsend;
Stock, Eveline O.;
Feng, James;
Malloy, Mary J.;
Kane, John P.

Publication type:

Article

Coupling sparse Cox models with clustering of longitudinal transcriptomics data for trauma prognosis.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00257-8

By:

Constantino, Cláudia S.;
Carvalho, Alexandra M.;
Vinga, Susana

Publication type:

Article

Prescreening and treatment of aortic dissection through an analysis of infinite-dimension data.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00249-8

By:

Qiu, Peng;
Li, Yixuan;
Liu, Kai;
Qin, Jinbao;
Ye, Kaichuang;
Chen, Tao;
Lu, Xinwu

Publication type:

Article

Ten important roles for academic leaders to promote equity, diversity, and inclusion in data science.

Published in:

2021

By:

Moore, Jason H.;
Truong, Van Q.;
Robbins, Ashley B.;
Nicholson, David;
Williams-Devane, Clar Lynda

Publication type:

Editorial

A multi-feature hybrid classification data mining technique for human-emotion.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00254-x

By:

Wang, Y.;
Chu, Y. M.;
Thaljaoui, A.;
Khan, Y. A.;
Chammam, W.;
Abbas, S. Z.

Publication type:

Article

Indels in SARS-CoV-2 occur at template-switching hotspots.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00251-0

By:

Chrisman, Brianna Sierra;
Paskov, Kelley;
Stockham, Nate.;
Tabatabaei, Kevin;
Jung, Jae-Yoon;
Washington, Peter;
Varma, Maya;
Sun, Min Woo;
Maleki, Sepideh;
Wall, Dennis P.

Publication type:

Article

RASMA: a reverse search algorithm for mining maximal frequent subgraphs.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00250-1

By:

Salem, Saeed;
Alokshiya, Mohammed;
Hasan, Mohammad Al

Publication type:

Article

Genetic risk score for ovarian cancer based on chromosomal-scale length variation.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00253-y

By:

Toh, Christopher;
Brody, James P.

Publication type:

Article

A comparative study on the unified model based multifactor dimensionality reduction methods for identifying gene-gene interactions associated with the survival phenotype.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00248-9

By:

Lee, Jung Wun;
Lee, Seungyeoun

Publication type:

Article

Performance of model-based multifactor dimensionality reduction methods for epistasis detection by controlling population structure.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00247-w

By:

Abegaz, Fentaw;
Van Lishout, François;
Mahachie John, Jestinah M.;
Chiachoompu, Kridsadakorn;
Bhardwaj, Archana;
Duroux, Diane;
Gusareva, Elena S.;
Wei, Zhi;
Hakonarson, Hakon;
Van Steen, Kristel

Publication type:

Article

DASSI: differential architecture search for splice identification from DNA sequences.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00237-y

By:

Moosa, Shabir;
Amira, Prof. Abbes;
Boughorbel, Dr. Sabri

Publication type:

Article

Gene function finding through cross-organism ensemble learning.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00239-w

By:

Moro, Gianluca;
Masseroli, Marco

Publication type:

Article

The Matthews correlation coefficient (MCC) is more reliable than balanced accuracy, bookmaker informedness, and markedness in two-class confusion matrix evaluation.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00244-z

By:

Chicco, Davide;
Tötsch, Niklas;
Jurman, Giuseppe

Publication type:

Article

Data analytics and clinical feature ranking of medical records of patients with sepsis.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00235-0

By:

Chicco, Davide;
Oneto, Luca

Publication type:

Article

Acoustic and language analysis of speech for suicidal ideation among US veterans.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00245-y

By:

Belouali, Anas;
Gupta, Samir;
Sourirajan, Vaibhav;
Yu, Jiawei;
Allen, Nathaniel;
Alaoui, Adil;
Dutton, Mary Ann;
Reinhard, Matthew J.

Publication type:

Article

Sparse self-attention aggregation networks for neural sequence slice interpolation.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00236-z

By:

Wang, Zejin;
Liu, Jing;
Chen, Xi;
Li, Guoqing;
Han, Hua

Publication type:

Article

Empowering the data science scientist.

Published in:

2021

By:

Moore, Jason H.

Publication type:

Editorial

A comparison of methods for interpreting random forest models of genetic association in the presence of non-additive interactions.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00243-0

By:

Orlenko, Alena;
Moore, Jason H.

Publication type:

Article

Feature selection using distributions of orthogonal PLS regression vectors in spectral data.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00240-3

By:

Lee, Geonseok;
Lee, Kichun

Publication type:

Article

Mechanistic modeling of the SARS-CoV-2 disease map.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00234-1

By:

Rian, Kinza;
Esteban-Medina, Marina;
Hidalgo, Marta R.;
Çubuk, Cankut;
Falco, Matias M.;
Loucera, Carlos;
Gunyel, Devrim;
Ostaszewski, Marek;
Peña-Chilet, María;
Dopazo, Joaquín

Publication type:

Article

An efficient computational method for predicting drug-target interactions using weighted extreme learning machine and speed up robot features.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00242-1

By:

An, Ji-Yong;
Meng, Fan-Rong;
Yan, Zi-Ji

Publication type:

Article

COVID-TRACK: world and USA SARS-COV-2 testing and COVID-19 tracking.

Published in:

BioData Mining, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13040-021-00233-2

By:

Zohner, Ye Emma;
Morris, Jeffrey S.

Publication type:

Article