Works matching IS 17560381 AND DT 2017 AND VI 10

Results: 40

Ten quick tips for machine learning in computational biology.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0155-3

By:

Chicco, Davide

Publication type:

Article

Artificial intelligence: more human with human.

Published in:

2017

By:

Sipper, Moshe;
Moore, Jason H.

Publication type:

Editorial

TSPmap, a tool making use of traveling salesperson problem solvers in the efficient and accurate construction of high-density genetic linkage maps.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0158-0

By:

Monroe, J. Grey;
Allen, Zachariah A.;
Tanger, Paul;
Mullen, Jack L.;
Lovell, John T.;
Moyers, Brook T.;
Whitley, Darrell;
McKay, John K.

Publication type:

Article

Cluster ensemble based on Random Forests for genetic data.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0156-2

By:

Alhusain, Luluah;
Hafez, Alaaeldin M.

Publication type:

Article

PMLB: a large benchmark suite for machine learning evaluation and comparison.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0154-4

By:

Olson, Randal S.;
La Cava, William;
Orzechowski, Patryk;
Urbanowicz, Ryan J.;
Moore, Jason H.

Publication type:

Article

Sparse generalized linear model with L<sub>0</sub> approximation for feature selection and prediction with big omics data.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0159-z

By:

Zhenqiu Liu;
Fengzhu Sun;
McGovern, Dermot P.

Publication type:

Article

OCDD: an obesity and co-morbid disease database.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0153-5

By:

Ray, Indrani;
Bhattacharya, Anindya;
De, Rajat K.

Publication type:

Article

Metrics to estimate differential coexpression networks.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0152-6

By:

Gonzalez-Valbuena, Elpidio-Emmanuel;
Treviño, Víctor

Publication type:

Article

Methods for enhancing the reproducibility of biomedical research findings using electronic health records.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0151-7

By:

Denaxas, Spiros;
Direk, Kenan;
Gonzalez-Izquierdo, Arturo;
Pikoula, Maria;
Cakiroglu, Aylin;
Moore, Jason;
Hemingway, Harry;
Smeeth, Liam

Publication type:

Article

RNA-sequence data normalization through in silico prediction of reference genes: the bacterial response to DNA damage as case study.

Published in:

BioData Mining, 2017, v. 10, n. 1, p. 1, doi. 10.1186/s13040-017-0150-8

By:

Berghoff, Bork;
Karlsson, Torgny;
Källman, Thomas;
Wagner, E.;
Grabherr, Manfred

Publication type:

Article

epiACO - a method for identifying epistasis based on ant Colony optimization algorithm.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0143-7

By:

Yingxia Sun;
Junliang Shang;
Jin-Xing Liu;
Shengjun Li;
Chun-Hou Zheng

Publication type:

Article

Identifying time-delayed gene regulatory networks via an evolvable hierarchical recurrent neural network.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0146-4

By:

Kordmahalleh, Mina Moradi;
Sefidmazgi, Mohammad Gorji;
Harrison, Scott H.;
Homaifar, Abdollah

Publication type:

Article

nRC: non-coding RNA Classifier based on structural features.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0148-2

By:

Fiannaca, Antonino;
La Rosa†, Massimo;
La Paglia, Laura;
Rizzo, Riccardo;
Urso, Alfonso

Publication type:

Article

Evolutionary computation: the next major transition of artificial intelligence?

Published in:

2017

By:

Sipper, Moshe;
Olson, Randal S.;
Moore, Jason H.

Publication type:

Editorial

Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0145-5

By:

Holzinger, Emily R.;
Verma, Shefali S.;
Moore, Carrie B.;
Hall, Molly;
De, Rishika;
Gilbert-Diamond, Diane;
Lanktree, Matthew B.;
Pankratz, Nathan;
Amuzu, Antoinette;
Burt, Amber;
Dale, Caroline;
Dudek, Scott;
Furlong, Clement E.;
Gaunt, Tom R.;
Seung Kim, Daniel;
Riess, Helene;
Sivapalaratnam, Suthesh;
Tragante, Vinicius;
van Iperen, Erik P. A.;
Brautbar, Ariel

Publication type:

Article

The Dark Proteome Database.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0144-6

By:

Perdigão, Nelson;
Rosa, Agostinho C.;
O'Donoghue, Seán I.

Publication type:

Article

Genetically improved BarraCUDA.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0149-1

By:

Langdon, W. B.;
Yee Hong Lam, Brian

Publication type:

Article

Arete - candidate gene prioritization using biological network topology with additional evidence types.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0141-9

By:

Artem Lysenko;
Boroevich, Keith Anthony;
Tatsuhiko Tsunoda

Publication type:

Article

EFS: an ensemble feature selection tool implemented as R-package and web-application.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0142-8

By:

Neumann, Ursula;
Genze, Nikita;
Heider, Dominik

Publication type:

Article

Computational dynamic approaches for temporal omics data with applications to systems medicine.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0140-x

By:

Yulan Liang;
Kelemen, Arpad

Publication type:

Article

Computational dynamic approaches for temporal omics data with applications to systems medicine.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0140-x

By:

Yulan Liang;
Kelemen, Arpad

Publication type:

Article

Accurate prediction of protein relative solvent accessibility using a balanced model.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-016-0121-5

By:

Wei Wu;
Zhiheng Wang;
Peisheng Cong;
Tonghua Li

Publication type:

Article

Grid-based stochastic search for hierarchical gene-gene interactions in population-based genetic studies of common human diseases.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0139-3

By:

Moore, Jason H.;
Andrews, Peter C.;
Olson, Randal S.;
Carlson, Sarah E.;
Larock, Curt R.;
Bulhoes, Mario J.;
O'Connor, James P.;
Greytak, Ellen M.;
Armentrout, Steven L.

Publication type:

Article

Vinasse fertirrigation alters soil resistome dynamics: an analysis based on metagenomic profiles.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0138-4

By:

Braga, Lucas P. P.;
Alves, Rafael F.;
Dellias, Marina T. F.;
Navarrete, Acacio A.;
Basso, Thiago O.;
Tsai, Siu M.

Publication type:

Article

Mining pathway associations for disease-related pathway activity analysis based on gene expression and methylation data.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0127-7

By:

Hyeonjeong Lee;
Miyoung Shin

Publication type:

Article

Meta-analytic support vector machine for integrating multiple omics data.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0126-8

By:

SungHwan Kim;
Jae-Hwan Jhong;
JungJun Lee;
Ja-Yong Koo

Publication type:

Article

Gene Set Enrichment Analyses: lessons learned from the heart failure phenotype.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0137-5

By:

Tragante, Vinicius;
Gho, Johannes M. I. H.;
Felix, Janine F.;
Vasan, Ramachandran S.;
Smith, Nicholas L.;
Voight, Benjamin F.;
Palmer, Colin;
van der Harst, Pim;
Moore, Jason H.;
Asselbergs, Folkert W.

Publication type:

Article

Rapid development of entity-based data models for bioinformatics with persistence object-oriented design and structured interfaces.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0130-z

By:

Tsur, Elishai Ezra

Publication type:

Article

The optimal crowd learning machine.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0135-7

By:

Battogtokh, Bilguunzaya;
Mojirsheibani, Majid;
Malley, James

Publication type:

Article

Study of Meta-analysis strategies for network inference using information-theoretic approaches.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0136-6

By:

Pham, Ngoc C.;
Haibe-Kains, Benjamin;
Bellot, Pau;
Bontempi, Gianluca;
Meyer, Patrick E.

Publication type:

Article

Feature analysis for classification of trace fluorescent labeled protein crystallization images.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0133-9

By:

Sigdel, Madhav;
Dinc, Imren;
Sigdel, Madhu S.;
Dinc, Semih;
Pusey, Marc L.;
Aygun, Ramazan S.

Publication type:

Article

Multi-class computational evolution: development, benchmark evaluation and application to RNA-Seq biomarker discovery.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0134-8

By:

Crabtree, Nathaniel M.;
Moore, Jason H.;
Bowyer, John F.;
George, Nysia I.

Publication type:

Article

Discovering feature relevancy and dependency by kernel-guided probabilistic model-building evolution.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0131-y

By:

Rodriguez, Nestor;
Rojas–Galeano, Sergio

Publication type:

Article

Semantics-based plausible reasoning to extend the knowledge coverage of medical knowledge bases for improved clinical decision support.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0123-y

By:

Mohammadhassanzadeh, Hossein;
Van Woensel, William;
Samina Raza Abidi;
Syed Sibte Raza Abidi

Publication type:

Article

Label-free data standardization for clinical metabolomics.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0132-x

By:

Lokhov, Petr G.;
Maslov, Dmitri L.;
Kharibin, Oleg N.;
Balashova, Elena E.;
Archakov, Alexander I.

Publication type:

Article

Variant Set Enrichment: an R package to identify disease-associated functional genomic regions.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0129-5

By:

Ahmed, Musaddeque;
Sallari, Richard C.;
Guo, Haiyang;
Moore, Jason H.;
Housheng Hansen He;
Lupien, Mathieu

Publication type:

Article

Erratum to: Meta-analytic support vector machine for integrating multiple omics data.

Published in:: 2017
Publication type:: Correction Notice

Elevated transcriptional levels of aldolase A (ALDOA) associates with cell cycle-related genes in patients with NSCLC and several solid tumors.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-016-0122-4

By:

Fan Zhang;
Jie-Diao Lin;
Xiao-Yu Zuo;
Yi-Xuan Zhuang;
Chao-Qun Hong;
Guo-Jun Zhang;
Xiao-Jiang Cui;
Yu-Kun Cui

Publication type:

Article

Gene set analysis controlling for length bias in RNA-seq experiments.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0125-9

By:

Xing Ren;
Qiang Hu;
Song Liu;
Jianmin Wang;
Miecznikowski, Jeffrey C.

Publication type:

Article

A feature selection method based on multiple kernel learning with expression profiles of different types.

Published in:

BioData Mining, 2017, v. 10, p. 1, doi. 10.1186/s13040-017-0124-x

By:

Wei Du;
Zhongbo Cao;
Tianci Song;
Ying Li;
Yanchun Liang

Publication type:

Article