Works matching IS 17558794 AND DT 2019 AND VI 12

Results: 200

Genome analysis and knowledge-driven variant interpretation with TGex.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0647-8

By:

Dahary, Dvir;
Golan, Yaron;
Mazor, Yaron;
Zelig, Ofer;
Barshir, Ruth;
Twik, Michal;
Iny Stein, Tsippi;
Rosner, Guy;
Kariv, Revital;
Chen, Fei;
Zhang, Qiang;
Shen, Yiping;
Safran, Marilyn;
Lancet, Doron;
Fishilevich, Simon

Publication type:

Article

A network clustering based feature selection strategy for classifying autism spectrum disorder.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0598-0

By:

Lingkai Tang;
Mostafa, Sakib;
Liao, Bo;
Fang-Xiang Wu

Publication type:

Article

Directional association test reveals high-quality putative cancer driver biomarkers including noncoding RNAs.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0565-9

By:

Hua Zhong;
Mingzhou Song

Publication type:

Article

A new method for mining information of co-expression network based on multicancers integrated data.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1

By:

Mi-Xiao Hou;
Ying-Lian Gao;
Jin-Xing Liu;
Junliang Shang;
Rong Zhu;
Sha-Sha Yuan

Publication type:

Article

Region-based interaction detection in genome-wide case-control studies.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0583-7

By:

Sen Zhang;
Wei Jiang;
Ma, Ronald C. W.;
Weichuan Yu

Publication type:

Article

Identifying driver genes involving gene dysregulated expression, tissue-specific expression and gene-gene network.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0619-z

By:

Junrong Song;
Wei Peng;
Feng Wang;
Jianxin Wang

Publication type:

Article

MEG3 promotes proliferation and inhibits apoptosis in osteoarthritis chondrocytes by miR-361-5p/FOXO1 axis.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0649-6

By:

Wang, Anying;
Hu, Naixia;
Zhang, Yefeng;
Chen, Yuanzhen;
Su, Changhui;
Lv, Yao;
Shen, Yong

Publication type:

Article

MECoRank: cancer driver genes discovery simultaneously evaluating the impact of SNVs and differential expression on transcriptional networks.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0582-8

By:

Ying Hui;
Pi-Jing Wei;
Junfeng Xia;
Yu-Tian Wang;
Chun-Hou Zheng

Publication type:

Article

Prediction of comorbid diseases using weighted geometric embedding of human interactome.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0605-5

By:

Akram, Pakeeza;
Liao, Li

Publication type:

Article

A network view of microRNA and gene interactions in different pathological stages of colon cancer.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0597-1

By:

Wen, Jia;
Hall, Benika;
Shi, Xinghua

Publication type:

Article

HiSSI: high-order SNP-SNP interactions detection based on efficient significant pattern and differential evolution.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0584-6

By:

Cao, Xia;
Liu, Jie;
Guo, Maozu;
Wang, Jun

Publication type:

Article

Analysis of gene expression profiles and protein-protein interaction networks in multiple tissues of systemic sclerosis.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0632-2

By:

Karimizadeh, Elham;
Sharifi-Zarchi, Ali;
Nikaein, Hassan;
Salehi, Seyedehsaba;
Salamatian, Bahar;
Elmi, Naser;
Gharibdoost, Farhad;
Mahmoudi, Mahdi

Publication type:

Article

wtest: an integrated R package for genetic epistasis testing.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 9, p. 1, doi. 10.1186/s12920-019-0638-9

By:

Sun, Rui;
Xia, Xiaoxuan;
Chong, Ka Chun;
Zee, Benny Chung-Ying;
Wu, William Ka Kei;
Wang, Maggie Haitian

Publication type:

Article

Integrative subspace clustering by common and specific decomposition for applications on cancer subtype identification.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 9, p. 1, doi. 10.1186/s12920-019-0633-1

By:

Guo, Yin;
Li, Huiran;
Cai, Menglan;
Li, Limin

Publication type:

Article

CDK1 and CCNB1 as potential diagnostic markers of rhabdomyosarcoma: validation following bioinformatics analysis.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0645-x

By:

Li, Qianru;
Zhang, Liang;
Jiang, Jinfang;
Zhang, Yangyang;
Wang, Xiaomeng;
Zhang, Qiaochu;
Wang, Yang;
Liu, Chunxia;
Li, Feng

Publication type:

Article

A network embedding model for pathogenic genes prediction by multi-path random walking on heterogeneous network.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0627-z

By:

Xu, Bo;
Liu, Yu;
Yu, Shuo;
Wang, Lei;
Dong, Jie;
Lin, Hongfei;
Yang, Zhihao;
Wang, Jian;
Xia, Feng

Publication type:

Article

Parameter, noise, and tree topology effects in tumor phylogeny inference.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0626-0

By:

Tomlinson, Kiran;
Oesper, Layla

Publication type:

Article

HPOAnnotator: improving large-scale prediction of HPO annotations by low-rank approximation with HPO semantic similarities and multiple PPI networks.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0625-1

By:

Gao, Junning;
Liu, Lizhi;
Yao, Shuwei;
Huang, Xiaodi;
Mamitsuka, Hiroshi;
Zhu, Shanfeng

Publication type:

Article

Interpretable deep neural network for cancer survival analysis by integrating genomic and clinical data.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0624-2

By:

Hao, Jie;
Kim, Youngsoon;
Mallavarapu, Tejaswini;
Oh, Jung Hun;
Kang, Mingon

Publication type:

Article

Heterogeneous network embedding enabling accurate disease association predictions.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0623-3

By:

Xiong, Yun;
Guo, Mengjie;
Ruan, Lu;
Kong, Xiangnan;
Tang, Chunlei;
Zhu, Yangyong;
Wang, Wei

Publication type:

Article

MiRNA-disease interaction prediction based on kernel neighborhood similarity and multi-network bidirectional propagation.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0622-4

By:

Ma, Yingjun;
He, Tingting;
Ge, Leixin;
Zhang, Chenhao;
Jiang, Xingpeng

Publication type:

Article

Karyotyping and prenatal diagnosis of 47,XX,+ 8[67]/46,XX [13] Mosaicism: case report and literature review.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0639-8

By:

Sun, Shaohua;
Zhan, Fang;
Jiang, Jiusheng;
Zhang, Xuerui;
Yan, Lei;
Cai, Weiyi;
Liu, Hailiang;
Cao, Donghua

Publication type:

Article

Differential alternative splicing regulation among hepatocellular carcinoma with different risk factors.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0635-z

By:

Young-Joo Jin;
Byun, Seyoun;
Han, Seonggyun;
Chamberlin, John;
Kim, Dongwook;
Younghee Lee

Publication type:

Article

GTX.Digest.VCF: an online NGS datainterpretation system based on intelligentgene ranking and large-scale text mining.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0637-x

By:

Yanhuang Jiang;
Chengkun Wu;
Yanghui Zhang;
Shaowei Zhang;
Shuojun Yu;
Peng Lei;
Qin Lu;
Yanwei Xi;
Hua Wang;
Zhuo Song

Publication type:

Article

Finding prognostic gene pairs for cancer from patient-specific gene networks.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0634-0

By:

Park, Byungkyu;
Lee, Wook;
Park, Inhee;
Han, Kyungsook

Publication type:

Article

Identification of lung cancer gene markers through kernel maximum mean discrepancy and information entropy.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0630-4

By:

Zhao, Zhixun;
Peng, Hui;
Zhang, Xiaocai;
Zheng, Yi;
Chen, Fang;
Fang, Liang;
Li, Jinyan

Publication type:

Article

Systematic computational identification of prognostic cytogenetic markers in neuroblastoma.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0620-6

By:

Qin, Chao;
He, Xiaoyan;
Zhao, Yanding;
Tong, Chun-Yip;
Zhu, Kenneth Y.;
Sun, Yongqi;
Cheng, Chao

Publication type:

Article

A deep neural network approach to predicting clinical outcomes of neuroblastoma patients.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0628-y

By:

Tranchevent, Léon-Charles;
Azuaje, Francisco;
Rajapakse, Jagath C.

Publication type:

Article

Improved cell composition deconvolution method of bulk gene expression profiles to quantify subsets of immune cells.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0613-5

By:

Chiu, Yen-Jung;
Hsieh, Yi-Hsuan;
Huang, Yen-Hua

Publication type:

Article

RNA-seq from archival FFPE breast cancer samples: molecular pathway fidelity and novel discovery.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0643-z

By:

Pennock, Nathan D.;
Jindal, Sonali;
Horton, Wesley;
Sun, Duanchen;
Narasimhan, Jayasri;
Carbone, Lucia;
Fei, Suzanne S.;
Searles, Robert;
Harrington, Christina A.;
Burchard, Julja;
Weinmann, Sheila;
Schedin, Pepper;
Xia, Zheng

Publication type:

Article

Competitive endogenous RNA (ceRNA) regulation network of lncRNAs, miRNAs, and mRNAs in Wilms tumour.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0644-y

By:

Tang, Fucai;
Lu, Zechao;
Wang, Jiamin;
Li, Zhibiao;
Wu, Weijia;
Duan, Haifeng;
He, Zhaohui

Publication type:

Article

Analysis of disease comorbidity patterns in a large-scale China population.

Published in:

BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0629-x

By:

Guo, Mengfei;
Yu, Yanan;
Wen, Tiancai;
Zhang, Xiaoping;
Liu, Baoyan;
Zhang, Jin;
Zhang, Runshun;
Zhang, Yanning;
Zhou, Xuezhong

Publication type:

Article

Genome-wide association study in Chinese cohort identifies one novel hypospadias risk associated locus at 12q13.13.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0642-0

By:

Chen, Zhongzhong;
Lin, Xiaoling;
Lei, Yunping;
Chen, Haitao;
Finnell, Richard H.;
Wang, Yaping;
Xu, Jianfeng;
Lu, Daru;
Xie, Hua;
Chen, Fang

Publication type:

Article

High-throughput RNA sequencing from paired lesional- and non-lesional skin reveals major alterations in the psoriasis circRNAome.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0616-2

By:

Moldovan, Liviu-Ionut;
Hansen, Thomas Birkballe;
Venø, Morten Trillingsgaard;
Okholm, Trine Line Hauge;
Andersen, Thomas Levin;
Hager, Henrik;
Iversen, Lars;
Kjems, Jørgen;
Johansen, Claus;
Kristensen, Lasse Sommer

Publication type:

Article

MySeq: privacy-protecting browser-based personal Genome analysis for genomics education and exploration.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0615-3

By:

Linderman, Michael D.;
McElroy, Leo;
Chang, Laura

Publication type:

Article

Correction to: A functional polymorphism in the promoter of miR-17-92 cluster is associated with decreased risk of ischemic stroke.

Published in:

2019

By:

Huang, Huatuo;
Wei, Guijiang;
Wang, Chunfang;
Lu, Yulan;
Liu, Chunhong;
Wang, Rong;
Shi, Xiang;
Yang, Jun;
Wei, Yesheng

Publication type:

Correction Notice

Reinterpretation, reclassification, and its downstream effects: challenges for clinical laboratory geneticists.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0612-6

By:

El Mecky, Julia;
Johansson, Lennart;
Plantinga, Mirjam;
Fenwick, Angela;
Lucassen, Anneke;
Dijkhuizen, Trijnie;
van der Hout, Annemieke;
Lyle, Kate;
van Langen, Irene

Publication type:

Article

Return of genetic and genomic research findings: experience of a pediatric biorepository.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0618-0

By:

Papaz, Tanya;
Liston, Eriskay;
Zahavich, Laura;
Stavropoulos, Dimitri J.;
Jobling, Rebekah K.;
Kim, Raymond H.;
Reuter, Miriam;
Miron, Anastasia;
Oechslin, Erwin;
Mondal, Tapas;
Bergin, Lynn;
Smythe, John F.;
Altamirano-Diaz, Luis;
Lougheed, Jane;
Yao, Roderick;
Akinrinade, Oyediran;
Breckpot, Jeroen;
Mital, Seema

Publication type:

Article

Genepanel.iobio - an easy to use web tool for generating disease- and phenotype-associated gene lists.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0641-1

By:

Ekawade, Aditya;
Velinder, Matt;
Ward, Alistair;
DiSera, Tonya;
Miller, Chase;
Qiao, Yi;
Marth, Gabor

Publication type:

Article

A female patient with retinoblastoma and severe intellectual disability carrying an X;13 balanced translocation without rearrangement in the RB1 gene: a case report.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0640-2

By:

Tsutsumi, Makiko;
Hattori, Hiroyoshi;
Akita, Nobuhiro;
Maeda, Naoko;
Kubota, Toshinobu;
Horibe, Keizo;
Fujita, Naoko;
Kawai, Miki;
Shinkai, Yasuko;
Kato, Maki;
Kato, Takema;
Kawamura, Rie;
Suzuki, Fumihiko;
Kurahashi, Hiroki

Publication type:

Article

Identification and ranking of recurrent neo-epitopes in cancer.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0611-7

By:

Blanc, Eric;
Holtgrewe, Manuel;
Dhamodaran, Arunraj;
Messerschmidt, Clemens;
Willimsky, Gerald;
Blankenstein, Thomas;
Beule, Dieter

Publication type:

Article

Clinical, cytogenetic, and molecular findings in a patient with ring chromosome 4: case report and literature review.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0614-4

By:

Paz-y-Miño, César;
Proaño, Ana;
Verdezoto, Stella D.;
García, Juan Luis;
Hernández-Rivas, Jesús María;
Leone, Paola E.

Publication type:

Article

Correction to: RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.

Published in:

2019

By:

Parker, Margaret M.;
Chase, Robert P.;
Lamb, Andrew;
Reyes, Alejandro;
Saferali, Aabida;
Yun, Jeong H.;
Himes, Blanca E.;
Silverman, Edwin K.;
Hersh, Craig P.;
Castaldi, Peter J.

Publication type:

Correction Notice

Classification of glioma based on prognostic alternative splicing.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0603-7

By:

Li, Yaomin;
Ren, Zhonglu;
Peng, Yuping;
Li, Kaishu;
Wang, Xiran;
Huang, Guanglong;
Qi, Songtao;
Liu, Yawei

Publication type:

Article

Integrative molecular analysis of metastatic hepatocellular carcinoma.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0586-4

By:

Wang, Dongfang;
Zhu, Yanjing;
Tang, Jing;
Lian, Qiuyu;
Luo, Guijuan;
Wen, Wen;
Zhang, Michael Q.;
Wang, Hongyang;
Chen, Lei;
Gu, Jin

Publication type:

Article

Medroxyprogesterone acetate causes the alterations of endoplasmic reticulum related mRNAs and lncRNAs in endometrial cancer cells.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0601-9

By:

Cao, Wenjiao;
Gao, Wuyuan;
Zheng, Panchan;
Sun, Xiao;
Wang, Lihua

Publication type:

Article

Accurate detection of KRAS, NRAS and BRAF mutations in metastatic colorectal cancers by bridged nucleic acid-clamp real-time PCR.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0610-8

By:

Nagakubo, Yuki;
Hirotsu, Yosuke;
Amemiya, Kenji;
Oyama, Toshio;
Mochizuki, Hitoshi;
Omata, Masao

Publication type:

Article

Significant random signatures reveals new biomarker for breast cancer.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0609-1

By:

Saberi Ansar, Elnaz;
Eslahchii, Changiz;
Rahimi, Mahsa;
Geranpayeh, Lobat;
Ebrahimi, Marzieh;
Aghdam, Rosa;
Kerdivel, Gwenneg

Publication type:

Article

A functional polymorphism in the promoter of miR-17-92 cluster is associated with decreased risk of ischemic stroke.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0589-1

By:

Huang, Huatuo;
Wei, Guijiang;
Wang, Chunfang;
Lu, Yulan;
Liu, Chunhong;
Wang, Rong;
Shi, Xiang;
Yang, Jun;
Wei, Yesheng

Publication type:

Article

Intrinsic and extrinsic epigenetic age acceleration are associated with hypertensive target organ damage in older African Americans.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0585-5

By:

Smith, Jennifer A.;
Raisky, Jeremy;
Ratliff, Scott M.;
Liu, Jiaxuan;
Kardia, Sharon L. R.;
Turner, Stephen T.;
Mosley, Thomas H.;
Zhao, Wei

Publication type:

Article