Works matching IS 17558794 AND DT 2015 AND VI 8 AND IP 1

Results: 86

TumorTracer: a method to identify the tissue of origin from the somatic mutations of a tumor specimen.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0130-0

By:

Marquard, Andrea Marion;
Birkbak, Nicolai Juul;
Thomas, Cecilia Engel;
Favero, Francesco;
Krzystanek, Marcin;
Lefebvre, Celine;
Ferté, Charles;
Jamal-Hanjani, Mariam;
Wilson, Gareth A.;
Shafi, Seema;
Swanton, Charles;
André, Fabrice;
Szallasi, Zoltan;
Eklund, Aron Charles

Publication type:

Article

RNA sequencing reveals a depletion of collagen targeting microRNAs in Dupuytren's disease.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0135-8

By:

Riester, Scott M.;
Arsoy, Diren;
Camilleri, Emily T.;
Dudakovic, Amel;
Paradise, Christopher R.;
Evans, Jared M.;
Torres-Mora, Jorge;
Rizzo, Marco;
Kloen, Peter;
Kruithof-de Julio, Marianna;
van Wijnen, Andre J.;
Kakar, Sanjeev

Publication type:

Article

Genome instability model of metastatic neuroblastoma tumorigenesis by a dictionary learning algorithm.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0132-y

By:

Masecchia, Salvatore;
Coco, Simona;
Barla, Annalisa;
Verri, Alessandro;
Tonini, Gian Paolo

Publication type:

Article

Integrated network analysis and logistic regression modeling identify stage-specific genes in Oral Squamous Cell Carcinoma.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0114-0

By:

Randhawa, Vinay;
Achary, Vishal

Publication type:

Article

Using gene expression signatures to identify novel treatment strategies in gulf war illness.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0111-3

By:

Craddock, Travis J. A.;
Harvey, Jeanna M.;
Nathanson, Lubov;
Barnes, Zachary M.;
Klimas, Nancy G.;
Fletcher, Mary Ann;
Broderick, Gordon

Publication type:

Article

Defining “mutation” and “polymorphism” in the era of personal genomics.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 37, doi. 10.1186/s12920-015-0115-z

By:

Karki, Roshan;
Pandya, Deep;
Elston, Robert C.;
Ferlini, Cristiano

Publication type:

Article

Using gene expression signatures to identify novel treatment strategies in gulf war illness.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0111-3

By:

Craddock, Travis J.A.;
Harvey, Jeanna M.;
Nathanson, Lubov;
Barnes, Zachary M.;
Klimas, Nancy G.;
Fletcher, Mary Ann;
Broderick, Gordon

Publication type:

Article

Haploinsufficiency and triploinsensitivity of the same 6p25.1p24.3 region in a family.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0113-1

By:

Zhongxia Qi;
Linda Jo Bone Jeng;
Anne Slavotinek;
Jingwei Yu

Publication type:

Article

Genome-wide microRNA expression profiling in placentas from pregnant women exposed to BPA.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0131-z

By:

De Felice, Bruna;
Manfellotto, Francesco;
Palumbo, Annarita;
Troisi, Jacopo;
Zullo, Fulvio;
Di Carlo, Costantino;
Di Spiezio Sardo, Attilio;
De Stefano, Noè;
Ferbo, Umberto;
Guida, Marco;
Guida, Maurizio

Publication type:

Article

Genome–wide microRNA expression profiling in placentas from pregnant women exposed to BPA.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 56, doi. 10.1186/s12920-015-0131-z

By:

De Felice, Bruna;
Manfellotto, Francesco;
Palumbo, Annarita;
Troisi, Jacopo;
Zullo, Fulvio;
Di Carlo, Costantino;
Di Spiezio Sardo, Attilio;
De Stefano, Noè;
Ferbo, Umberto;
Guida, Marco;
Guida, Maurizio

Publication type:

Article

Development and verification of the PAM50-based Prosigna breast cancer gene signature assay.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0129-6

By:

Wallden, Brett;
Storhoff, James;
Nielsen, Torsten;
Dowidar, Naeem;
Schaper, Carl;
Ferree, Sean;
Shuzhen Liu;
Leung, Samuel;
Geiss, Gary;
Snider, Jacqueline;
Vickery, Tammi;
Davies, Sherri R.;
Mardis, Elaine R.;
Gnant, Michael;
Sestak, Ivana;
Ellis, Matthew J.;
Perou, Charles M.;
Bernard, Philip S.;
Parker, Joel S.

Publication type:

Article

RNA sequencing from human neutrophils reveals distinct transcriptional differences associated with chronic inflammatory states.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0128-7

By:

Kaiyu Jiang;
Xiaoyun Sun;
Yanmin Chen;
Yufeng Shen;
Jarvis, James N.

Publication type:

Article

Transcriptional analysis of immune-related gene expression in p53-deficient mice with increased susceptibility to influenza A virus infection.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0127-8

By:

Wenjun Yan;
Jianchao Wei;
Xufang Deng;
Zixue Shi;
Zixiang Zhu;
Donghua Shao;
Beibei Li;
Shaohui Wang;
Guangzhi Tong;
Zhiyong Ma

Publication type:

Article

FoxM1 transactivates PTTG1 and promotes colorectal cancer cell migration and invasion.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0126-9

By:

Yun Zheng;
Jinjun Guo;
Jin Zhou;
Jinjian Lu;
Qi Chen;
Cui Zhang;
Chen Qing;
Koeffler, H. Philip;
Yunguang Tong

Publication type:

Article

Harmful somatic amino acid substitutions affect key pathways in cancers.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0125-x

By:

Niroula, Abhishek;
Vihinen, Mauno

Publication type:

Article

Preparing the next generation of genomicists: a laboratory-style course in medical genomics.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0124-y

By:

Linderman, Michael D.;
Bashir, Ali;
Diaz, George A.;
Kasarskis, Andrew;
Sanderson, Saskia C.;
Zinberg, Randi E.;
Mahajan, Milind;
Shah, Hardik;
Suckiel, Sabrina;
Zweig, Micol;
Schadt, Eric E.

Publication type:

Article

Loss of heterozygosity: what is it good for?

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0123-z

By:

Ryland, Georgina L.;
Doyle, Maria A.;
Goode, David;
Boyle, Samantha E.;
Choong, David Y. H.;
Rowley, Simone M.;
Jason Li;
Bowtell, David D. L.;
Tothill, Richard W.;
Campbell, Ian G.;
Gorringe, Kylie L.

Publication type:

Article

Design of a randomized controlled trial of disclosing genomic risk of coronary heart disease: the Myocardial Infarction Genes (MI-GENES) study.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0122-0

By:

Kullo, Iftikhar J.;
Jouni, Hayan;
Olson, Janet E.;
Montori, Victor M.;
Bailey, Kent R.

Publication type:

Article

Integrating microbial and host transcriptomics to characterize asthma-associated microbial communities.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0121-1

By:

Castro-Nallar, Eduardo;
Ying Shen;
Freishtat, Robert J.;
Pérez-Losada, Marcos;
Manimaran, Solaiappan;
Gang Liu;
Johnson, W. Evan;
Crandall, Keith A.

Publication type:

Article

Diagnostic biases in translational bioinformatics.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0116-y

By:

Han, Henry

Publication type:

Article

Association of SNPs in LCP1 and CTIF with hearing in 11 year old children: Findings from the Avon Longitudinal Study of Parents and Children (ALSPAC) birth cohort and the G-EAR consortium.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0112-2

By:

Harrison, Sean;
Lewis, Sarah J.;
Hall, Amanda J.;
Vuckovic, Dragana;
Girotto, Giorgia;
Martin, Richard M.;
Adams, Josephine C.

Publication type:

Article

Design of a randomized controlled trial of disclosing genomic risk of coronary heart disease: the Myocardial Infarction Genes (MI-GENES) study.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 51, doi. 10.1186/s12920-015-0122-0

By:

Kullo, Iftikhar J.;
Jouni, Hayan;
Olson, Janet E.;
Montori, Victor M.;
Bailey, Kent R.

Publication type:

Article

Harmful somatic amino acid substitutions affect key pathways in cancers.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 53, doi. 10.1186/s12920-015-0125-x

By:

Niroula, Abhishek;
Vihinen, Mauno

Publication type:

Article

Transcriptional analysis of immune-related gene expression in p53-deficient mice with increased susceptibility to influenza A virus infection.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 52, doi. 10.1186/s12920-015-0127-8

By:

Wenjun Yan;
Jianchao Wei;
Xufang Deng;
Zixue Shi;
Zixiang Zhu;
Donghua Shao;
Beibei Li;
Shaohui Wang;
Guangzhi Tong;
Zhiyong Ma

Publication type:

Article

Genomic approaches to identifying targets for treating β hemoglobinopathies.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0120-2

By:

Ngo, Duyen A.;
Steinberg, Martin H.

Publication type:

Article

Expression analysis of human adiposederived stem cells during in vitro differentiation to an adipocyte lineage.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0119-8

By:

Satish, Latha;
Michael Krill-Burger, J.;
Gallo, Phillip H.;
Etages, Shelley Des;
Fang Liu;
Philips, Brian J.;
Ravuri, Sudheer;
Marra, Kacey G.;
La Framboise, William A.;
Kathju, Sandeep;
Peter Rubin, J.

Publication type:

Article

Integrated sequence and expression analysis of ovarian cancer structural variants underscores the importance of gene fusion regulation.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0118-9

By:

Mittal, Vinay K.;
McDonald, John F.

Publication type:

Article

Removing reference mapping biases using limited or no genotype data identifies allelic differences in protein binding at diseaseassociated loci.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0117-x

By:

Buchkovich, Martin L.;
Eklund, Karl;
Qing Duan;
Yun Li;
Mohlke, Karen L.;
Furey, Terrence S.

Publication type:

Article

Defining "mutation" and "polymorphism" in the era of personal genomics.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0115-z

By:

Karki, Roshan;
Pandya, Deep;
Elston, Robert C.;
Ferini, Cristiano

Publication type:

Article

Randomized comparison of next-generation sequencing and array comparative genomic hybridization for preimplantation genetic screening: a pilot study.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0110-4

By:

Zhihong Yang;
James Lin;
Zhang, John;
Wai Ieng Fong;
Pei Li;
Rong Zhao;
Xiaohong Liu;
Podevin, William;
Yanping Kuang;
Jiaen Liu

Publication type:

Article

From big data analysis to personalized medicine for all: challenges and opportunities.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0108-y

By:

Alyass, Akram;
Turcotte, Michelle;
Meyre, David

Publication type:

Article

High-resolution characterization of sequence signatures due to non-random cleavage of cell-free DNA.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0107-z

By:

Chandrananda, Dineika;
Thorne, Natalie P.;
Bahlo, Melanie

Publication type:

Article

Biomarker discovery: quantification of microRNAs and other small non-coding RNAs using next generation sequencing.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0109-x

By:

Lopez, Juan Pablo;
Diallo, Alpha;
Cruceanu, Cristiana;
Fiori, Laura M.;
Laboissiere, Sylvie;
Guillet, Isabelle;
Fontaine, Joelle;
Ragoussis, Jiannis;
Benes, Vladimir;
Turecki, Gustavo;
Ernst, Carl

Publication type:

Article

Massive interstitial copy-neutral loss-ofheterozygosity as evidence for cancer being a disease of the DNA-damage response.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0104-2

By:

Yogesh Kumar;
Jianfeng Yang;
Taobo Hu;
Lei Chen;
Zhi Xu;
Lin Xu;
Xiao-Xia Hu;
Gusheng Tang;
Jian-Min Wang;
Yi Li;
Wai-Sang Poon;
Weiqing Wan;
Liwei Zhang;
Wai-Kin Mat;
Pun, Frank W.;
Peggy Lee;
Cheong, Timothy H. Y.;
Xiaofan Ding;
Siu-Kin Ng;
Shui-Ying Tsang

Publication type:

Article

Genomic approaches to identifying targets for treating β hemoglobinopathies

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 44, doi. 10.1186/s12920-015-0120-2

By:

Ngo, Duyen A.;
Steinberg, Martin H.

Publication type:

Article

Removing reference mapping biases using limited or no genotype data identifies allelic differences in protein binding at disease-associated loci.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 43, doi. 10.1186/s12920-015-0117-x

By:

Buchkovich, Martin L.;
Eklund, Karl;
Qing Duan;
Yun Li;
Mohlke, Karen L.;
Furey, Terrence S.

Publication type:

Article

Massive interstitial copy-neutral loss-of-heterozygosity as evidence for cancer being a disease of the DNA-damage response.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0104-2

By:

Kumar, Yogesh;
Jianfeng Yang;
Taobo Hu;
Lei Chen;
Zhi Xu;
Lin Xu;
Xiao-Xia Hu;
Gusheng Tang;
Jian-Min Wang;
Yi Li;
Wai-Sang Poon;
Weiqing Wan;
Liwei Zhang;
Wai-Kin Mat;
Pun, Frank W.;
Peggy Lee;
Cheong, Timothy H. Y.;
Xiaofan Ding;
Siu-Kin Ng;
Shui-Ying Tsang

Publication type:

Article

Expression analysis of human adipose-derived stem cells during in vitro differentiation to an adipocyte lineage.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 41, doi. 10.1186/s12920-015-0119-8

By:

Satish, Latha;
Krill-Burger, J. Michael;
Gallo, Phillip H.;
Etages, Shelley Des;
Fang Liu;
Philips, Brian J.;
Ravuri, Sudheer;
Marra, Kacey G.;
LaFramboise, William A.;
Kathju, Sandeep;
Rubin, J. Peter

Publication type:

Article

Integrated sequence and expression analysis of ovarian cancer structural variants underscores the importance of gene fusion regulation.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 40, doi. 10.1186/s12920-015-0118-9

By:

Mittal, Vinay K.;
McDonald, John F.

Publication type:

Article

Integrated network analysis and logistic regression modeling identify stage-specific genes in Oral Squamous Cell Carcinoma.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 39, doi. 10.1186/s12920-015-0114-0

By:

Randhawa, Vinay;
Acharya, Vishal

Publication type:

Article

Haploinsufficiency and triploinsensitivity of the same 6p25.1p24.3 region in a family.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 38, doi. 10.1186/s12920-015-0113-1

By:

Zhongxia Qi;
Bone Jeng, Linda Jo;
Slavotinek, Anne;
Jingwei Yu

Publication type:

Article

Integrated approaches to miRNAs target definition: time-series analysis in an osteosarcoma differentiative model.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0106-0

By:

Grilli, A.;
Sciandra, M.;
Terracciano, M.;
Picci, P.;
Scotlandi, K.

Publication type:

Article

Integrative epigenomic and genomic filtering for methylation markers in hepatocellular carcinomas.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0105-1

By:

Shen, Jing;
LeFave, Clare;
Sirosh, Iryna;
Siegel, Abby B.;
Tycko, Benjamin;
Santella, Regina M.

Publication type:

Article

Integrated genomics has identified a new AT/RT-like yet INI1-positive brain tumor subtype among primary pediatric embryonal tumors.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0103-3

By:

Donald Ming-Tak Ho;
Chuan-Chi Shih;
Muh-Lii Liang;
Chan-Yen Tsai;
Tsung-Han Hsieh;
Chin-Han Tsai;
Shih-Chieh Lin;
Ting-Yu Chang;
Meng-En Chao;
Hsei-Wei Wang;
Tai-Tong Wong

Publication type:

Article

Small RNAs in metastatic and non-metastatic oral squamous cell carcinoma.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0102-4

By:

Severino, Patricia;
Oliveira, Liliane Santana;
Andreghetto, Flávia Maziero;
Torres, Natalia;
Curioni, Otávio;
Cury, Patricia Maluf;
Toporcov, Tatiana Natasha;
Paschoal, Alexandre Rossi;
Durham, Alan Mitchell

Publication type:

Article

Metabolic changes in type 2 diabetes are reflected in peripheral blood cells, revealing aberrant cytotoxicity, a viral signature, and hypoxia inducible factor activity.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0096-y

By:

van der Pouw Kraan, Tineke C. T. M.;
Chen, Weena J.;
Bunck, Mathijs C. M.;
van Raalte, Daniel H.;
van der Zijl, Nynke J.;
van Genugten, Renate E.;
van Bloemendaal, Liselotte;
Baggen, Josefien M.;
Serné, Erik H.;
Diamant, Michaela;
Horrevoets, Anton J. G.

Publication type:

Article

Molecular subtypes of urothelial carcinoma are defined by specific gene regulatory systems.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0101-5

By:

Eriksson, Pontus;
Aine, Mattias;
Veerla, Srinivas;
Liedberg, Fredrik;
Sjödahl, Gottfrid;
Höglund, Mattias

Publication type:

Article

Co-expression network of neural-differentiation genes shows specific pattern in schizophrenia.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0098-9

By:

Maschietto, Mariana;
Tahira, Ana C.;
Puga, Renato;
Lima, Leandro;
Mariani, Daniel;
da Silveira Paulsen, Bruna;
Belmonte-de-Abreu, Paulo;
Vieira, Henrique;
Krepischi, Ana CV;
Carraro, Dirce M.;
Palha, Joana A.;
Rehen, Stevens;
Brentani, Helena

Publication type:

Article

Blood-based identification of non-responders to anti-TNF therapy in rheumatoid arthritis.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0100-6

By:

Thomson, Ty M.;
Lescarbeau, Reynald M.;
Drubin, David A.;
Laifenfeld, Daphna;
de Graaf, David;
Fryburg, David A.;
Littman, Bruce;
Deehan, Renée;
Van Hooser, Aaron

Publication type:

Article

Gestational tissue transcriptomics in term and preterm human pregnancies: a systematic review and meta-analysis.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0099-8

By:

Eidem, Haley R.;
Ackerman IV, William E.;
McGary, Kriston L.;
Abbot, Patrick;
Rokas, Antonis

Publication type:

Article