TINNiK: inference of the tree of blobs of a species network under the coalescent model.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00266-2
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- Article
Works matching IS 17487188 AND DT 2024 AND VI 19 AND IP 1
Results: 26
1
2
On the parameterized complexity of the median and closest problems under some permutation metrics.
- Published in:
- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00269-z
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- Article
3
New generalized metric based on branch length distance to compare B cell lineage trees.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00267-1
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- Article
4
Metric multidimensional scaling for large single-cell datasets using neural networks.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00265-3
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- Publication type:
- Article
5
Compression algorithm for colored de Bruijn graphs.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00254-6
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- Article
6
ESKEMAP: exact sketch-based read mapping.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00261-7
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- Article
7
NestedBD: Bayesian inference of phylogenetic trees from single-cell copy number profiles under a birth-death model.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00264-4
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- Publication type:
- Article
8
Fast, parallel, and cache-friendly suffix array construction.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00263-5
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- Article
9
Revisiting the complexity of and algorithms for the graph traversal edit distance and its variants.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00262-6
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- Publication type:
- Article
10
Fast, parallel, and cache-friendly suffix array construction.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00263-5
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- Publication type:
- Article
11
Pfp-fm: an accelerated FM-index.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00260-8
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- Article
12
Space-efficient computation of k-mer dictionaries for large values of k.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00259-1
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- Publication type:
- Article
13
Infrared: a declarative tree decomposition-powered framework for bioinformatics.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00258-2
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- Publication type:
- Article
14
Median quartet tree search algorithms using optimal subtree prune and regraft.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00257-3
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- Publication type:
- Article
15
Suffix sorting via matching statistics.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-023-00245-z
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- Publication type:
- Article
16
Finding maximal exact matches in graphs.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00255-5
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- Publication type:
- Article
17
SparseRNAfolD: optimized sparse RNA pseudoknot-free folding with dangle consideration.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00256-4
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- Publication type:
- Article
18
Recombinations, chains and caps: resolving problems with the DCJ-indel model.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00253-7
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- Publication type:
- Article
19
Unifying duplication episode clustering and gene-species mapping inference.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00252-8
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- Article
20
Global exact optimisations for chloroplast structural haplotype scaffolding.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-023-00243-1
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- Article
21
Predicting horizontal gene transfers with perfect transfer networks.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-023-00242-2
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- Publication type:
- Article
22
Co-linear chaining on pangenome graphs.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00250-w
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- Publication type:
- Article
23
Fulgor: a fast and compact k-mer index for large-scale matching and color queries.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00251-9
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- Publication type:
- Article
24
Fulgor: a fast and compact k-mer index for large-scale matching and color queries.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-024-00251-9
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- Publication type:
- Article
25
Dollo-CDP: a polynomial-time algorithm for the clade-constrained large Dollo parsimony problem.
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- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-023-00249-9
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- Publication type:
- Article
26
Investigating the complexity of the double distance problems.
- Published in:
- Algorithms for Molecular Biology, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13015-023-00246-y
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- Publication type:
- Article