Sparsification of RNA structure prediction including pseudoknots.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 39, doi. 10.1186/1748-7188-5-39
- By:
- Publication type:
- Article
Works matching IS 17487188 AND DT 2010 AND VI 5
Results: 39
1
2
Efficient algorithms for training the parameters of hidden Markov models using stochastic expectation maximization (EM) training andViterbi training.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 38, doi. 10.1186/1748-7188-5-38
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- Publication type:
- Article
3
Accuracy of phylogeny reconstruction methods combining overlapping gene data sets.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 37, doi. 10.1186/1748-7188-5-37
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- Publication type:
- Article
4
Module detection in complex networks using integer optimisation.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 36, doi. 10.1186/1748-7188-5-36
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- Publication type:
- Article
5
Estimating the evidence of selection and thereliability of inference in unigenic evolution.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 35, doi. 10.1186/1748-7188-5-35
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- Publication type:
- Article
6
Predicting direct protein interactions from affinitypurification mass spectrometry data.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 34, doi. 10.1186/1748-7188-5-34
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- Publication type:
- Article
7
Scoring function to predict solubility mutagenesis.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 33, doi. 10.1186/1748-7188-5-33
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- Publication type:
- Article
8
Gravitation field algorithm and its application in gene cluster.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 32, doi. 10.1186/1748-7188-5-32
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- Publication type:
- Article
9
Periodic pattern detection in sparse boolean sequences.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 31, doi. 10.1186/1748-7188-5-31
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- Publication type:
- Article
10
Survival associated pathway identification with group L<sub>p</sub> penalized global AUC maximization.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 30, doi. 10.1186/1748-7188-5-30
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- Publication type:
- Article
11
An automated stochastic approach to theidentification of the protein specificitydeterminants and functional subfamilies.
- Published in:
- 2010
- By:
- Publication type:
- Product Review
12
Optimal selection of epitopes for TXPimmunoaffinitymass spectrometry.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 28, doi. 10.1186/1748-7188-5-28
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- Publication type:
- Article
13
Inverse folding of RNA pseudoknot structures.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 27, doi. 10.1186/1748-7188-5-27
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- Publication type:
- Article
14
Polynomial algorithms for the Maximal PairingProblem: efficient phylogenetic targeting onarbitrary trees.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 25, doi. 10.1186/1748-7188-5-25
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- Publication type:
- Article
15
AlignMiner: a Web-based tool for detection ofdivergent regions in multiple sequencealignments of conserved sequences.
- Published in:
- 2010
- By:
- Publication type:
- Product Review
16
Hierarchical folding of multiple sequencealignments for the prediction of structures andRNA-RNA interactions.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 22, doi. 10.1186/1748-7188-5-22
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- Publication type:
- Article
17
On the use of cartographic projections in visualizing phylo-genetic tree space.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 26, doi. 10.1186/1748-7188-5-26
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- Publication type:
- Article
18
Differential co-expression framework to quantify goodness of biclusters and compare biclustering algorithms.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 23, doi. 10.1186/1748-7188-5-23
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- Publication type:
- Article
19
Sequence embedding for fast construction of guide trees for multiple sequence alignment.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 21, doi. 10.1186/1748-7188-5-21
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- Publication type:
- Article
20
Challenges in experimental data integration within genome-scale metabolic models.
- Published in:
- 2010
- By:
- Publication type:
- Proceeding
21
Distinguishing between hot-spots and melting-pots of genetic diversity using haplotype connectivity.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 19, doi. 10.1186/1748-7188-5-19
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- Publication type:
- Article
22
Robinson-Foulds Supertrees.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 18, doi. 10.1186/1748-7188-5-18
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- Publication type:
- Article
23
ANMM4CBR: a case-based reasoning method for gene expression data classification.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 14, doi. 10.1186/1748-7188-5-14
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- Publication type:
- Article
24
FlecSnap: Flexible Non-sequential Protein Structure Alignment.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 12, doi. 10.1186/1748-7188-5-12
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- Publication type:
- Article
25
A simulation study comparing supertree and combined analysis methods using SMIDGen.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 8, doi. 10.1186/1748-7188-5-8
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- Publication type:
- Article
26
Association of repeatedly measured intermediate risk factors for complex diseases with high dimensional SNP data.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 1
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- Publication type:
- Article
27
Jane: a new tool for the cophylogeny reconstruction problem.
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- Algorithms for Molecular Biology, 2010, v. 5, p. 1
- By:
- Publication type:
- Article
28
Exact distribution of a pattern in a set of random sequences generated by a Markov source: applications to biological data.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
- By:
- Publication type:
- Article
29
A simple, practical and complete O...-time Algorithm for RNA folding using the Four-Russians Speedup.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
- By:
- Publication type:
- Article
30
Efficient algorithms for analyzing segmental duplications with deletions and inversions in genomes.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
- By:
- Publication type:
- Article
31
A markov classification model for metabolic pathways.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
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- Publication type:
- Article
32
A tree-based method for the rapid screening of chemical fingerprints.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
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- Publication type:
- Article
33
Linear-time protein 3-D structure searching with insertions and deletions.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
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- Publication type:
- Article
34
Back-translation for discovering distant protein homologies in the presence of frameshift mutations.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
- By:
- Publication type:
- Article
35
Fast prediction of RNA-RNA interaction.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
- By:
- Publication type:
- Article
36
Mimosa: Mixture model of co-expression to detect modulators of regulatory interaction.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
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- Publication type:
- Article
37
Phylogenetic comparative assembly.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
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- Publication type:
- Article
38
Constructing majority-rule supertrees.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1
- By:
- Publication type:
- Article
39
Refining transcriptional regulatory networks using network evolutionary models and gene histories.
- Published in:
- Algorithms for Molecular Biology, 2010, v. 5, p. 1, doi. 10.1186/1748-7188-5-1
- By:
- Publication type:
- Article