Works matching IS 17456150 AND DT 2016 AND VI 11

Results: 66

Compartmentalization in PVC super-phylum: evolution and impact.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0144-3

By:

Pinos, Sandrine;
Pontarotti, Pierre;
Raoult, Didier;
Baudoin, Jean Pierre;
Pagnier, Isabelle

Publication type:

Article

Comparative genomic analysis of retrogene repertoire in two green algae Volvox carteri and Chlamydomonas reinhardtii.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0138-1

By:

Jąkalski, Marcin;
Kazutaka Takeshita;
Deblieck, Mathieu;
Koyanagi, Kanako O.;
Makałowska, Izabela;
Watanabe, Hidemi;
Makałowski, Wojciech

Publication type:

Article

The multiple evolutionary origins of the eukaryotic N-glycosylation pathway.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0137-2

By:

Lombard, Jonathan

Publication type:

Article

Estimation of ribosome profiling performance and reproducibility at various levels of resolution.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0127-4

By:

Diament, Alon;
Tuller, Tamir

Publication type:

Article

Ribosome reinitiation at leader peptides increases translation of bacterial proteins.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0123-8

By:

Korolev, Semen A.;
Zverkov, Oleg A.;
Seliverstov, Alexandr V.;
Lyubetsky, Vassily A.

Publication type:

Article

Alpha proteobacterial ancestry of the [Fe-Fe]-hydrogenases in anaerobic eukaryotes.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0136-3

By:

Esposti, Mauro Degli;
Cortez, Diego;
Lozano, Luis;
Rasmussen, Simon;
Nielsen, Henrik Bjørn;
Romero, Esperanza Martinez

Publication type:

Article

The evolutionary scope and neurological disease linkage of yeast-prion-like proteins in humans.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0134-5

By:

Lu An;
Harrison, Paul M.

Publication type:

Article

A web server for analysis, comparison and prediction of protein ligand binding sites.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0118-5

By:

Singh, Harinder;
Kumar Srivastava, Hemant;
Raghava, Gajendra P. S.

Publication type:

Article

MONGKIE: an integrated tool for network analysis and visualization for multi-omics data.

Published in:

2016

By:

Yeongjun Jang;
Namhee Yu;
Jihae Seo;
Sun Kim;
Sanghyuk Lee

Publication type:

Product Review

Stem-like features of cancer cells on their way to metastasis.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0135-4

By:

Gkountela, Sofia;
Aceto, Nicola

Publication type:

Article

Selection on metabolic pathway function in the presence of mutation-selection-drift balance leads to rate-limiting steps that are not evolutionarily stable.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0133-6

By:

Orlenko, Alena;
Teufel, Ashley I.;
Chi, Peter B.;
Liberles, David A.

Publication type:

Article

Conservation and divergence of the histone code in nucleomorphs.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0119-4

By:

Marinov, Georgi K.;
Lynch, Michael

Publication type:

Article

Intrinsic protein disorder in histone lysine methylation.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0129-2

By:

Lazar, Tamas;
Schad, Eva;
Szabo, Beata;
Horvath, Tamas;
Meszaros, Attila;
Tompa, Peter;
Tantos, Agnes

Publication type:

Article

Erratum to: What can ecosystems learn? Expanding evolutionary ecology with learning theory.

Published in:: 2016
Publication type:: Correction Notice

Evolutionary consequences of polyploidy in prokaryotes and the origin of mitosis and meiosis.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0131-8

By:

Markov, Alexander V.;
Kaznacheev, Ilya S.

Publication type:

Article

Computational recognition and analysis of hitherto uncharacterized nucleotide cyclase-like proteins in bacteria.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0130-9

By:

Ramakrishnan, Gayatri;
Jain, Abha;
Chandra, Nagasuma;
Srinivasan, Narayanaswamy

Publication type:

Article

Gene overlapping and size constraints in the viral world.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0128-3

By:

Brandes, Nadav;
Linial, Michal

Publication type:

Article

Biochemical and biophysical characterization of cell-free synthesized Rift Valley fever virus nucleoprotein capsids enables in vitro screening to identify novel antivirals.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0126-5

By:

Broce, Sean;
Hensley, Lisa;
Sato, Tomoharu;
Lehrer-Graiwer, Joshua;
Essrich, Christian;
Edwards, Katie J.;
Pajda, Jacqueline;
Davis, Christopher J.;
Bhadresh, Rami;
Hurt, Clarence R.;
Freeman, Beverly;
Lingappa, Vishwanath R.;
Kelleher, Colm A.;
Karpuj, Marcela V.

Publication type:

Article

Infinitely long branches and an informal test of common ancestry.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0120-y

By:

de Oliveira Martins, Leonardo;
Posada, David

Publication type:

Article

Systematic analysis of somatic mutations driving cancer: uncovering functional protein regions in disease development.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0125-6

By:

Mészáros, Bálint;
Zeke, András;
Reményi, Attila;
Simon, István;
Dosztányi, Zsuzsanna

Publication type:

Article

Beyond Turing: mechanochemical pattern formation in biological tissues.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0124-7

By:

Mercker, Moritz;
Brinkmann, Felix;
Marciniak-Czochra, Anna;
Richter, Thomas

Publication type:

Article

The cyclin D1 carboxyl regulatory domain controls the division and differentiation of hematopoietic cells.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0122-9

By:

Chaves-Ferreira, Miguel;
Krenn, Gerald;
Vasseur, Florence;
Barinov, Aleksandr;
Gonçalves, Pedro;
Azogui, Orly;
Cumano, Ana;
Zhi Li;
Pellegrini, Sandra;
Rocha, Benedita;
Laderach, Diego

Publication type:

Article

The Columbian Exchange as a source of adaptive introgression in human populations.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0121-x

By:

King Jordan, I.

Publication type:

Article

Altools: a user friendly NGS data analyser.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0110-0

By:

Camiolo, Salvatore;
Sablok, Gaurav;
Porceddu, Andrea

Publication type:

Article

Biochemistry and physiology within the framework of the extended synthesis of evolutionary biology.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0109-6

By:

Vianello, Angelo;
Passamonti, Sabina

Publication type:

Article

Nucleic acids delivery methods for genome editing in zygotes and embryos: the old, the new, and the old-new.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0115-8

By:

Sato, Masahiro;
Ohtsuka, Masato;
Watanabe, Satoshi;
Gurumurthy, Channabasavaiah B.

Publication type:

Article

Just how Lamarckian is CRISPR-Cas immunity: the continuum of evolvability mechanisms.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0111-z

By:

Koonin, Eugene V.;
Wolf, Yuri I.

Publication type:

Article

Onset, timing, and exposure therapy of stress disorders: mechanistic insight from a mathematical model of oscillating neuroendocrine dynamics.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0117-6

By:

Kim, Lae U.;
D'Orsogna, Maria R.;
Chou, Tom

Publication type:

Article

Viroids: "living fossils" of primordial RNAs?

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0116-7

By:

Diener, Theodor O.

Publication type:

Article

Preservation of methylated CpG dinucleotides in human CpG islands.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0113-x

By:

Panchin, Alexander Y.;
Makeev, Vsevolod J.;
Medvedeva, Yulia A.;
Kuznetsov, Vladimir;
Sunyaev, Shamil;
Kondrashov, Alexey

Publication type:

Article

Numerical simulation of vascular tumour growth under antiangiogenic treatment: addressing the paradigm of single-agent bevacizumab therapy with the use of experimental data.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0114-9

By:

Argyri, Katerina D.;
Dionysiou, Dimitra D.;
Misichroni, Fay D.;
Stamatakos, Georgios S.;
Hanin, L.;
Radivoyevitch, T.;
Edler, L.

Publication type:

Article

Characterizing exons and introns by regularity of nucleotide strings.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0108-7

By:

Wood, Tonya;
Preeprem, Thanawadee;
Kichun Lee;
Woojin Chang;
Vidakovic, Brani

Publication type:

Article

A paneukaryotic genomic analysis of the small GTPase RABL2 underscores the significance of recurrent gene loss in eukaryote evolution.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0107-8

By:

Eliáš, Marek;
Klimeš, Vladimír;
Derelle, Romain;
Petrželková, Romana;
Tachezy, Jan

Publication type:

Article

BLAST-based structural annotation of protein residues using Protein Data Bank.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0106-9

By:

Singh, Harinder;
Raghava, Gajendra P. S.

Publication type:

Article

Direct next-generation sequencing of virus-human mixed samples without pretreatment is favorable to recover virus genome.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0105-x

By:

Dingchen Li;
Zongwei Li;
Zhe Zhou;
Zhen Li;
Xinyan Qu;
Peisong Xu;
Pingkun Zhou;
Xiaochen Bo;
Ming Ni

Publication type:

Article

The mysterious orphans of Mycoplasmataceae.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-015-0104-3

By:

Tatarinova, Tatiana V.;
Lysnyansky, Inna;
Nikolsky, Yuri V.;
Bolshoy, Alexander

Publication type:

Article

A mathematical approach to virus therapy of glioblastomas.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-015-0100-7

By:

Lopez de Rioja, Victor;
Isern, Neus;
Fort, Joaquim

Publication type:

Article

Expansion of the molecular and morphological diversity of Acanthamoebidae (Centramoebida, Amoebozoa) and identification of a novel life cycle type within the group.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0171-0

By:

Tice, Alexander K.;
Shadwick, Lora L.;
Fiore-Donno, Anna Maria;
Geisen, Stefan;
Seungho Kang;
Schuler, Gabriel A.;
Spiegel, Frederick W.;
Wilkinson, Katherine A.;
Bonkowski, Michael;
Dumack, Kenneth;
Lahr, Daniel J. G.;
Voelcker, Eckhard;
Clauβ, Steffen;
Junling Zhang;
Brown, Matthew W.;
Koonin, Eugene;
Lopez-Garcia, Purificacion;
Baldauf, Sandra

Publication type:

Article

Prognostic value of cross-omics screening for kidney clear cell renal cancer survival.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0170-1

By:

Dimitrieva, Slavica;
Schlapbach, Ralph;
Rehrauer, Hubert

Publication type:

Article

Sensitivity, specificity, and reproducibility of RNA-Seq differential expression calls.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0169-7

By:

Łabaj, Paweł P.;
Kreil, David P.

Publication type:

Article

Exploring the importance of cancer pathways by meta-analysis of differential protein expression networks in three different cancers.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0168-8

By:

Sikdar, Sinjini;
Datta, Somnath;
Datta, Susmita

Publication type:

Article

Inter-platform concordance of gene expression data for the prediction of chemical mode of action.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0167-9

By:

Siriwardhana, Chathura;
Datta, Susmita;
Datta, Somnath

Publication type:

Article

The role of the backbone torsion in protein folding.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0166-x

By:

Sorokina, Irina;
Mushegian, Arcady

Publication type:

Article

xHMMER3x2: Utilizing HMMER3's speed and HMMER2's sensitivity and specificity in the glocal alignment mode for improved large-scale protein domain annotation.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0163-0

By:

Choon-Kong Yap;
Eisenhaber, Birgit;
Eisenhaber, Frank;
Wing-Cheong Wong

Publication type:

Article

ZFAS1: a long noncoding RNA associated with ribosomes in breast cancer cells.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0165-y

By:

Hansji, Herah;
Leung, Euphemia Y.;
Baguley, Bruce C.;
Finlay, Graeme J.;
Cameron-Smith, David;
Figueiredo, Vandre C.;
Askarian-Amiri, Marjan E.

Publication type:

Article

Importins promote high-frequency NF-κB oscillations increasing information channel capacity.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0164-z

By:

Korwek, Zbigniew;
Tudelska, Karolina;
Nałęcz-Jawecki, Paweł;
Czerkies, Maciej;
Prus, Wiktor;
Markiewicz, Joanna;
Kochańczyk, Marek;
Lipniacki, Tomasz

Publication type:

Article

Neurogenomics and the role of a large mutational target on rapid behavioral change.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0162-1

By:

Stanley Jr., Craig E.;
Kulathinal, Rob J.

Publication type:

Article

The struggle by Caenorhabditis elegans to maintain proteostasis during aging and disease.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0161-2

By:

Kikis, Elise A.;
Luigi Bubacco;
Lewis, Patrick;
Roucou, Xavier

Publication type:

Article

Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0160-3

By:

Zhengchang Wu;
Weiyun Qin;
Seng Wu;
Guoqiang Zhu;
Wenbin Bao;
Shenglong Wu;
Smalheiser, Neil R.;
Weixiong Zhang

Publication type:

Article

CLIP-GENE: a web service of the condition specific context-laid integrative analysis for gene prioritization in mouse TF knockout experiments.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0158-x

By:

Benjamin Hur;
Sangsoo Lim;
Heejoon Chae;
Seokjun Seo;
Sunwon Lee;
Jaewoo Kang;
Sun Kim;
Lee;
Pongor

Publication type:

Article