Works matching IS 17444292 AND DT 2010 AND VI 6 AND IP 1

Results: 116

Pre‐steady and stable morphogen gradients: can they coexist?

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.86

By:

Morton de Lachapelle, Aitana;
Bergmann, Sven

Publication type:

Article

Inferring condition‐specific transcription factor function from DNA binding and gene expression data.

Published in:

2010

By:

McCord, Rachel Patton;
Berger, Michael F;
Philippakis, Anthony A;
Bulyk, Martha L

Publication type:

Correction Notice

mRNA turnover rate limits siRNA and microRNA efficacy.

Published in:

2010

By:

Larsson, Erik;
Sander, Chris;
Marks, Debora

Publication type:

Correction Notice

A global protein-lipid interactome map.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.100

By:

Brehme, Marc;
Vidal, Marc

Publication type:

Article

Metabolism gets lucky.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.94

By:

Cooper, Tim F

Publication type:

Article

Coupling governs entrainment range of circadian clocks.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.92

By:

Abraham, Ute;
Granada, Adrián E;
Westermark, Pål O;
Heine, Markus;
Kramer, Achim;
Herzel, Hanspeter

Publication type:

Article

Chromatin regulators as capacitors of interspecies variations in gene expression.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.84

By:

Tirosh, Itay;
Reikhav, Sharon;
Sigal, Nadejda;
Assia, Yael;
Barkai, Naama

Publication type:

Article

Chromatin regulators shape the genotype–phenotype map.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.97

By:

Landry, Christian R;
Rifkin, Scott A

Publication type:

Article

Unraveling condition-dependent networks of transcription factors that control metabolic pathway activity in yeast.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.91

By:

Fendt, Sarah‐Maria;
Oliveira, Ana Paula;
Christen, Stefan;
Picotti, Paola;
Dechant, Reinhard Christoph;
Sauer, Uwe

Publication type:

Article

A systematic screen for protein–lipid interactions in Saccharomyces cerevisiae.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.87

By:

Gallego, Oriol;
Betts, Matthew J;
Gvozdenovic‐Jeremic, Jelena;
Maeda, Kenji;
Matetzki, Christian;
Aguilar‐Gurrieri, Carmen;
Beltran‐Alvarez, Pedro;
Bonn, Stefan;
Fernández‐Tornero, Carlos;
Jensen, Lars Juhl;
Kuhn, Michael;
Trott, Jamie;
Rybin, Vladimir;
Müller, Christoph W;
Bork, Peer;
Kaksonen, Marko;
Russell, Robert B;
Gavin, Anne‐Claude

Publication type:

Article

A matter of timing and precision.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.85

By:

Jaeger, Johannes

Publication type:

Article

Intra- and inter-chromosomal interactions correlate with CTCF binding genome wide.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.79

By:

Botta, Marco;
Haider, Syed;
Leung, Ian X Y;
Lio, Pietro;
Mozziconacci, Julien

Publication type:

Article

Impact of translational error-induced and error-free misfolding on the rate of protein evolution.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.78

By:

Yang, Jian‐Rong;
Zhuang, Shi‐Mei;
Zhang, Jianzhi

Publication type:

Article

Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.76

By:

Jiao, Yuling;
Meyerowitz, Elliot M

Publication type:

Article

Connecting cell fate decision networks in hematopoeisis from the outside in.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.75

By:

Gaudet, Suzanne

Publication type:

Article

Dynamic interaction networks in a hierarchically organized tissue.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.71

By:

Kirouac, Daniel C;
Ito, Caryn;
Csaszar, Elizabeth;
Roch, Aline;
Yu, Mei;
Sykes, Edward A;
Bader, Gary D;
Zandstra, Peter W

Publication type:

Article

A comprehensive molecular interaction map of the budding yeast cell cycle.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.73

By:

Kaizu, Kazunari;
Ghosh, Samik;
Matsuoka, Yukiko;
Moriya, Hisao;
Shimizu‐Yoshida, Yuki;
Kitano, Hiroaki

Publication type:

Article

HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.62

By:

Gille, Christoph;
Bölling, Christian;
Hoppe, Andreas;
Bulik, Sascha;
Hoffmann, Sabrina;
Hübner, Katrin;
Karlstädt, Anja;
Ganeshan, Ramanan;
König, Matthias;
Rother, Kristian;
Weidlich, Michael;
Behre, Jörn;
Holzhütter, Herrmann‐Georg

Publication type:

Article

From bench to website.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.72

By:

Lemberger, Thomas

Publication type:

Article

Towards whole-body systems physiology.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.70

By:

Kuepfer, Lars

Publication type:

Article

Emergent cooperation in microbial metabolism.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.66

By:

Wintermute, Edwin H;
Silver, Pamela A

Publication type:

Article

Computational reconstruction of tissue-specific metabolic models: application to human liver metabolism.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.56

By:

Jerby, Livnat;
Shlomi, Tomer;
Ruppin, Eytan

Publication type:

Article

Transcriptional regulation is only half the story.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.63

By:

Plotkin, Joshua B

Publication type:

Article

Modeling genome-wide replication kinetics reveals a mechanism for regulation of replication timing.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.61

By:

Yang, Scott Cheng‐Hsin;
Rhind, Nicholas;
Bechhoefer, John

Publication type:

Article

microRNA-122 as a regulator of mitochondrial metabolic gene network in hepatocellular carcinoma.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.58

By:

Burchard, Julja;
Zhang, Chunsheng;
Liu, Angela M;
Poon, Ronnie T P;
Lee, Nikki P Y;
Wong, Kwong‐Fai;
Sham, Pak C;
Lam, Brian Y;
Ferguson, Mark D;
Tokiwa, George;
Smith, Ryan;
Leeson, Brendan;
Beard, Rebecca;
Lamb, John R;
Lim, Lee;
Mao, Mao;
Dai, Hongyue;
Luk, John M

Publication type:

Article

Cooperation and Hamilton’s rule in a simple synthetic microbial system.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.57

By:

Chuang, John S;
Rivoire, Olivier;
Leibler, Stanislas

Publication type:

Article

A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.44

By:

Brettschneider, Christian;
Rose, Rebecca J;
Hertel, Stefanie;
Axmann, Ilka M;
Heck, Albert J R;
Kollmann, Markus

Publication type:

Article

Develop reusable and combinable designs for transcriptional logic gates.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.42

By:

Zhan, Jian;
Ding, Bo;
Ma, Rui;
Ma, Xiaoyu;
Su, Xiaofeng;
Zhao, Yun;
Liu, Ziqing;
Wu, Jiarui;
Liu, Haiyan

Publication type:

Article

Violations of robustness trade-offs.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.40

By:

Kitano, Hiroaki

Publication type:

Article

Dynamic CRM occupancy reflects a temporal map of developmental progression.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.35

By:

Wilczyński, Bartek;
Furlong, Eileen E M

Publication type:

Article

Automated identification of pathways from quantitative genetic interaction data.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.27

By:

Battle, Alexis;
Jonikas, Martin C;
Walter, Peter;
Weissman, Jonathan S;
Koller, Daphne

Publication type:

Article

Chemical combinations elucidate pathway interactions and regulation relevant to Hepatitis C replication.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.32

By:

Owens, Christopher M;
Mawhinney, Christina;
Grenier, Jill M;
Altmeyer, Ralf;
Lee, Margaret S;
Borisy, Alexis A;
Lehár, Joseph;
Johansen, Lisa M

Publication type:

Article

Ecological distribution and population physiology defined by proteomics in a natural microbial community.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.30

By:

Mueller, Ryan S;
Denef, Vincent J;
Kalnejais, Linda H;
Suttle, K Blake;
Thomas, Brian C;
Wilmes, Paul;
Smith, Richard L;
Nordstrom, D Kirk;
McCleskey, R Blaine;
Shah, Manesh B;
VerBerkmoes, Nathan C;
Hettich, Robert L;
Banfield, Jillian F

Publication type:

Article

Boolean modeling of transcriptome data reveals novel modes of heterotrimeric G-protein action.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.28

By:

Pandey, Sona;
Wang, Rui‐Sheng;
Wilson, Liza;
Li, Song;
Zhao, Zhixin;
Gookin, Timothy E;
Assmann, Sarah M;
Albert, Réka

Publication type:

Article

The phosphoproteome of toll-like receptor-activated macrophages.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.29

By:

Weintz, Gabriele;
Olsen, Jesper V;
Frühauf, Katja;
Niedzielska, Magdalena;
Amit, Ido;
Jantsch, Jonathan;
Mages, Jörg;
Frech, Cornelie;
Dölken, Lars;
Mann, Matthias;
Lang, Roland

Publication type:

Article

Clustering phenotype populations by genome-wide RNAi and multiparametric imaging.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.25

By:

Fuchs, Florian;
Pau, Gregoire;
Kranz, Dominique;
Sklyar, Oleg;
Budjan, Christoph;
Steinbrink, Sandra;
Horn, Thomas;
Pedal, Angelika;
Huber, Wolfgang;
Boutros, Michael

Publication type:

Article

Nucleosome patterning evolution: steady aim despite moving targets.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.34

By:

Hittinger, Chris Todd;
Hesselberth, Jay R

Publication type:

Article

Chromosomal periodicity and positional networks of genes in Escherichia coli.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.21

By:

Mathelier, Anthony;
Carbone, Alessandra

Publication type:

Article

Divergence of nucleosome positioning between two closely related yeast species: genetic basis and functional consequences.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.20

By:

Tirosh, Itay;
Sigal, Nadejda;
Barkai, Naama

Publication type:

Article

Metabolomic and transcriptomic stress response of Escherichia coli.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.18

By:

Jozefczuk, Szymon;
Klie, Sebastian;
Catchpole, Gareth;
Szymanski, Jedrzej;
Cuadros‐Inostroza, Alvaro;
Steinhauser, Dirk;
Selbig, Joachim;
Willmitzer, Lothar

Publication type:

Article

Target mRNA abundance dilutes microRNA and siRNA activity.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.24

By:

Arvey, Aaron;
Larsson, Erik;
Sander, Chris;
Leslie, Christina S;
Marks, Debora S

Publication type:

Article

Reconstruction annotation jamborees: a community approach to systems biology.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.15

By:

Thiele, Ines;
Palsson, Bernhard Ø

Publication type:

Article

A functional metagenomic approach for expanding the synthetic biology toolbox for biomass conversion.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.16

By:

Sommer, Morten OA;
Church, George M;
Dantas, Gautam

Publication type:

Article

Short-term memory in gene induction reveals the regulatory principle behind stochastic IL-4 expression.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.13

By:

Mariani, Luca;
Schulz, Edda G;
Lexberg, Maria H;
Helmstetter, Caroline;
Radbruch, Andreas;
Löhning, Max;
Höfer, Thomas

Publication type:

Article

Pre-dispositions and epigenetic inheritance in the Escherichia coli lactose operon bistable switch.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.12

By:

Robert, Lydia;
Paul, Gregory;
Chen, Yong;
Taddei, François;
Baigl, Damien;
Lindner, Ariel B

Publication type:

Article

Tradeoff between enzyme and metabolite efficiency maintains metabolic homeostasis upon perturbations in enzyme capacity.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.11

By:

Fendt, Sarah‐Maria;
Buescher, Joerg Martin;
Rudroff, Florian;
Picotti, Paola;
Zamboni, Nicola;
Sauer, Uwe

Publication type:

Article

Bacterial adaptation through distributed sensing of metabolic fluxes.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.10

By:

Kotte, Oliver;
Zaugg, Judith B;
Heinemann, Matthias

Publication type:

Article

Zebrafish Pou5f1-dependent transcriptional networks in temporal control of early development.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.9

By:

Onichtchouk, Daria;
Geier, Florian;
Polok, Bozena;
Messerschmidt, Daniel M;
Mössner, Rebecca;
Wendik, Björn;
Song, Sungmin;
Taylor, Verdon;
Timmer, Jens;
Driever, Wolfgang

Publication type:

Article

Dynamics within the CD95 death-inducing signaling complex decide life and death of cells.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.6

By:

Neumann, Leo;
Pforr, Carina;
Beaudouin, Joel;
Pappa, Alexander;
Fricker, Nicolai;
Krammer, Peter H;
Lavrik, Inna N;
Eils, Roland

Publication type:

Article

Precision and scaling in morphogen gradient read-out.

Published in:

Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.7

By:

Morton de Lachapelle, Aitana;
Bergmann, Sven

Publication type:

Article