Works matching IS 17444292 AND DT 2008 AND VI 4 AND IP 1

Results: 78

Erratum To: Increased glycolytic flux as an outcome of whole‐genome duplication in yeast.
Published in:
2008
By:
- Conant, Gavin C;
- Wolfe, Kenneth H
Publication type:
Correction Notice
In reply: ‘Dynamic analysis of optimality in myocardial energy metabolism under normal and ischemic conditions’.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.38
By:
- Luo, Ruo‐Yu;
- Li, Yi‐Xue;
- Luo, Qingming
Publication type:
Article
Erratum To: Isoform switching facilitates period control in the Neurospora crassa circadian clock.
Published in:
2008
By:
- Akman, Ozgur E;
- Locke, James CW;
- Tang, Sanyi;
- Carré, Isabelle;
- Millar, Andrew J;
- Rand, David A
Publication type:
Correction Notice
Analysis of pairwise cell interactions using an integrated dielectrophoretic-microfluidic system.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.69
By:
- Yin, Zhizhong;
- Noren, David;
- Wang, C Joanne;
- Hang, Rob;
- Levchenko, Andre
Publication type:
Article
Hepatitis C virus infection protein network.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.66
By:
- de Chassey, B;
- Navratil, V;
- Tafforeau, L;
- Hiet, M S;
- Aublin‐Gex, A;
- Agaugué, S;
- Meiffren, G;
- Pradezynski, F;
- Faria, B F;
- Chantier, T;
- Le Breton, M;
- Pellet, J;
- Davoust, N;
- Mangeot, P E;
- Chaboud, A;
- Penin, F;
- Jacob, Y;
- Vidalain, P O;
- Vidal, M;
- André, P
Publication type:
Article
Finding multiple target optimal intervention in disease-related molecular network.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.60
By:
- Yang, Kun;
- Bai, Hongjun;
- Ouyang, Qi;
- Lai, Luhua;
- Tang, Chao
Publication type:
Article
Developmental regulatory bits.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.64
By:
- Siggia, Eric D
Publication type:
Article
The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.63
By:
- Balázsi, Gábor;
- Heath, Allison P;
- Shi, Lanbo;
- Gennaro, Maria L
Publication type:
Article
Small hairpin RNA as a small molecule sensor.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.67
By:
- Benenson, Yaakov
Publication type:
Article
Model-guided design of ligand-regulated RNAi for programmable control of gene expression.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.62
By:
- Beisel, Chase L;
- Bayer, Travis S;
- Hoff, Kevin G;
- Smolke, Christina D
Publication type:
Article
Systemic multicompartmental effects of the gut microbiome on mouse metabolic phenotypes.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.56
By:
- Claus, Sandrine P;
- Tsang, Tsz M;
- Wang, Yulan;
- Cloarec, Olivier;
- Skordi, Eleni;
- Martin, François‐Pierre;
- Rezzi, Serge;
- Ross, Alastair;
- Kochhar, Sunil;
- Holmes, Elaine;
- Nicholson, Jeremy K
Publication type:
Article
InnateDB: facilitating systems-level analyses of the mammalian innate immune response.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.55
By:
- Lynn, David J;
- Winsor, Geoffrey L;
- Chan, Calvin;
- Richard, Nicolas;
- Laird, Matthew R;
- Barsky, Aaron;
- Gardy, Jennifer L;
- Roche, Fiona M;
- Chan, Timothy H W;
- Shah, Naisha;
- Lo, Raymond;
- Naseer, Misbah;
- Que, Jaimmie;
- Yau, Melissa;
- Acab, Michael;
- Tulpan, Dan;
- Whiteside, Matthew D;
- Chikatamarla, Avinash;
- Mah, Bernadette;
- Munzner, Tamara
Publication type:
Article
A competitive complex formation mechanism underlies trichome patterning on Arabidopsis leaves.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.54
By:
- Digiuni, Simona;
- Schellmann, Swen;
- Geier, Florian;
- Greese, Bettina;
- Pesch, Martina;
- Wester, Katja;
- Dartan, Burcu;
- Mach, Valerie;
- Srinivas, Bhylahalli Purushottam;
- Timmer, Jens;
- Fleck, Christian;
- Hulskamp, Martin
Publication type:
Article
Models from experiments: combinatorial drug perturbations of cancer cells.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.53
By:
- Nelander, Sven;
- Wang, Weiqing;
- Nilsson, Björn;
- She, Qing‐Bai;
- Pratilas, Christine;
- Rosen, Neal;
- Gennemark, Peter;
- Sander, Chris
Publication type:
Article
High-order combination effects and biological robustness.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.51
By:
- Lehár, Joseph;
- Krueger, Andrew;
- Zimmermann, Grant;
- Borisy, Alexis
Publication type:
Article
Constraints imposed by non-functional protein–protein interactions on gene expression and proteome size.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.48
By:
- Zhang, Jingshan;
- Maslov, Sergei;
- Shakhnovich, Eugene I
Publication type:
Article
From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.42
By:
- Ulitsky, Igor;
- Shlomi, Tomer;
- Kupiec, Martin;
- Shamir, Ron
Publication type:
Article
Comment on ‘Dynamic analysis of optimality in myocardial energy metabolism under normal and ischemic conditions’.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.37
By:
- Beard, Daniel A
Publication type:
Article
The incoherent feed-forward loop can generate non-monotonic input functions for genes.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.43
By:
- Kaplan, Shai;
- Bren, Anat;
- Dekel, Erez;
- Alon, Uri
Publication type:
Article
Parasites lead to evolution of robustness against gene loss in host signaling networks.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.44
By:
- Salathé, Marcel;
- Soyer, Orkun S
Publication type:
Article
When microarrays Met epidermal-cell migration.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.41
By:
- Janes, Kevin A
Publication type:
Article
Gene network dynamics controlling keratinocyte migration.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.36
By:
- Busch, Hauke;
- Camacho‐Trullio, David;
- Rogon, Zbigniew;
- Breuhahn, Kai;
- Angel, Peter;
- Eils, Roland;
- Szabowski, Axel
Publication type:
Article
Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.35
By:
- Kunin, Victor;
- Raes, Jeroen;
- Harris, J Kirk;
- Spear, John R;
- Walker, Jeffrey J;
- Ivanova, Natalia;
- von Mering, Christian;
- Bebout, Brad M;
- Pace, Norman R;
- Bork, Peer;
- Hugenholtz, Philip
Publication type:
Article
Gender-dependent progression of systemic metabolic states in early childhood.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.34
By:
- Nikkilä, Janne;
- Sysi‐Aho, Marko;
- Ermolov, Andrey;
- Seppänen‐Laakso, Tuulikki;
- Simell, Olli;
- Kaski, Samuel;
- Orešič, Matej
Publication type:
Article
Colored extrinsic fluctuations and stochastic gene expression.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.31
By:
- Shahrezaei, Vahid;
- Ollivier, Julien F;
- Swain, Peter S
Publication type:
Article
A theoretical model of mitotic spindle elongation under experimental constraints.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.33
By:
- Surrey, Thomas
Publication type:
Article
Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.32
By:
- Sugiyama, Naoyuki;
- Nakagami, Hirofumi;
- Mochida, Keiichi;
- Daudi, Arsalan;
- Tomita, Masaru;
- Shirasu, Ken;
- Ishihama, Yasushi
Publication type:
Article
Recursive construction of perfect DNA molecules from imperfect oligonucleotides.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.26
By:
- Linshiz, Gregory;
- Yehezkel, Tuval Ben;
- Kaplan, Shai;
- Gronau, Ilan;
- Ravid, Sivan;
- Adar, Rivka;
- Shapiro, Ehud
Publication type:
Article
Systems engineering to systems biology.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.22
By:
- Yıldırım, Muhammed A;
- Vidal, Marc
Publication type:
Article
Ultrasensitive gene regulation by positive feedback loops in nucleosome modification.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.21
By:
- Sneppen, Kim;
- Micheelsen, Mille A;
- Dodd, Ian B
Publication type:
Article
Synthetic gene brushes: a structure–function relationship.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.20
By:
- Buxboim, Amnon;
- Daube, Shirley S;
- Bar‐Ziv, Roy
Publication type:
Article
Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.12
By:
- Andersen, Mikael Rørdam;
- Nielsen, Michael Lynge;
- Nielsen, Jens
Publication type:
Article
Systems analysis of metabolism in the pathogenic trypanosomatid Leishmania major.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.15
By:
- Chavali, Arvind K;
- Whittemore, Jeffrey D;
- Eddy, James A;
- Williams, Kyle T;
- Papin, Jason A
Publication type:
Article
The liver pharmacological and xenobiotic gene response repertoire.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.9
By:
- Natsoulis, Georges;
- Pearson, Cecelia I;
- Gollub, Jeremy;
- P Eynon, Barrett;
- Ferng, Joe;
- Nair, Ramesh;
- Idury, Radha;
- Lee, May D;
- Fielden, Mark R;
- Brennan, Richard J;
- Roter, Alan H;
- Jarnagin, Kurt
Publication type:
Article
A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.10
By:
- de Berardinis, Véronique;
- Vallenet, David;
- Castelli, Vanina;
- Besnard, Marielle;
- Pinet, Agnès;
- Cruaud, Corinne;
- Samair, Sumitta;
- Lechaplais, Christophe;
- Gyapay, Gabor;
- Richez, Céline;
- Durot, Maxime;
- Kreimeyer, Annett;
- Le Fèvre, François;
- Schächter, Vincent;
- Pezo, Valérie;
- Döring, Volker;
- Scarpelli, Claude;
- Médigue, Claudine;
- Cohen, Georges N;
- Marlière, Philippe
Publication type:
Article
A comprehensive modular map of molecular interactions in RB/E2F pathway.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.7
By:
- Calzone, Laurence;
- Gelay, Amélie;
- Zinovyev, Andrei;
- Radvanyi, François;
- Barillot, Emmanuel
Publication type:
Article
A systems-level approach to mapping the telomere length maintenance gene circuitry.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.13
By:
- Shachar, Rafi;
- Ungar, Lior;
- Kupiec, Martin;
- Ruppin, Eytan;
- Sharan, Roded
Publication type:
Article
Formulating genome-scale kinetic models in the post-genome era.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.8
By:
- Jamshidi, Neema;
- Palsson, Bernhard Ø
Publication type:
Article
Selection to minimise noise in living systems and its implications for the evolution of gene expression.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.11
By:
- Lehner, Ben
Publication type:
Article
<sup>1</sup>H NMR metabonomics approach to the disease continuum of diabetic complications and premature death.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb4100205
By:
- Mäkinen, Ville‐Petteri;
- Soininen, Pasi;
- Forsblom, Carol;
- Parkkonen, Maija;
- Ingman, Petri;
- Kaski, Kimmo;
- Groop, Per‐Henrik;
- Ala‐Korpela, Mika
Publication type:
Article
Modularity defined.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.3
By:
- Sauro, Herbert M
Publication type:
Article
Accurate prediction of protein–protein interactions from sequence alignments using a Bayesian method.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb4100203
By:
- Burger, Lukas;
- van Nimwegen, Erik
Publication type:
Article
‘Junk’ DNA meets the p53 network.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.68
By:
- Blattner, Christine
Publication type:
Article
Robust and sensitive control of a quorum-sensing circuit by two interlocked feedback loops.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.70
By:
- Williams, Joshua W;
- Cui, Xiaohui;
- Levchenko, Andre;
- Stevens, Ann M
Publication type:
Article
Metabolomic and flux-balance analysis of age-related decline of hypoxia tolerance in Drosophila muscle tissue.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.71
By:
- Coquin, Laurence;
- Feala, Jacob D;
- McCulloch, Andrew D;
- Paternostro, Giovanni
Publication type:
Article
p53-repressed miRNAs are involved with E2F in a feed-forward loop promoting proliferation.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.65
By:
- Brosh, Ran;
- Shalgi, Reut;
- Liran, Atar;
- Landan, Gilad;
- Korotayev, Katya;
- Nguyen, Giang Huong;
- Enerly, Espen;
- Johnsen, Hilde;
- Buganim, Yosef;
- Solomon, Hilla;
- Goldstein, Ido;
- Madar, Shalom;
- Goldfinger, Naomi;
- Børresen‐Dale, Anne‐Lise;
- Ginsberg, Doron;
- Harris, Curtis C;
- Pilpel, Yitzhak;
- Oren, Moshe;
- Rotter, Varda
Publication type:
Article
Selected reaction monitoring for quantitative proteomics: a tutorial.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.61
By:
- Lange, Vinzenz;
- Picotti, Paola;
- Domon, Bruno;
- Aebersold, Ruedi
Publication type:
Article
A quantitative comparison of sRNA-based and protein-based gene regulation.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.58
By:
- Mehta, Pankaj;
- Goyal, Sidhartha;
- Wingreen, Ned S
Publication type:
Article
An integrated cell-free metabolic platform for protein production and synthetic biology.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.57
By:
- Jewett, Michael C;
- Calhoun, Kara A;
- Voloshin, Alexei;
- Wuu, Jessica J;
- Swartz, James R
Publication type:
Article
Transient transcriptional responses to stress are generated by opposing effects of mRNA production and degradation.
Published in:
Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.59
By:
- Shalem, Ophir;
- Dahan, Orna;
- Levo, Michal;
- Martinez, Maria Rodriguez;
- Furman, Itay;
- Segal, Eran;
- Pilpel, Yitzhak
Publication type:
Article