Works matching IS 17444292 AND DT 2007 AND VI 3 AND IP 1

Results: 87

Erratum To: How to infer gene networks from expression profiles.

Published in:

2007

By:

Bansal, Mukesh;
Belcastro, Vincenzo;
Ambesi‐Impiombato, Alberto;
di Bernardo, Diego

Publication type:

Correction Notice

Synthetic biology: promises and challenges.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100202

By:

Serrano, Luis

Publication type:

Article

Brain expression—is it all in our SNPs?

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100199

By:

Khaitovich, Philipp

Publication type:

Article

Deriving structure from evolution: metazoan segmentation.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100192

By:

François, Paul;
Hakim, Vincent;
Siggia, Eric D

Publication type:

Article

Modeling the regulatory network of histone acetylation in Saccharomyces cerevisiae.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100194

By:

Pham, Hung;
Ferrari, Roberto;
Cokus, Shawn J;
Kurdistani, Siavash K;
Pellegrini, Matteo

Publication type:

Article

A map of human cancer signaling.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100200

By:

Cui, Qinghua;
Ma, Yun;
Jaramillo, Maria;
Bari, Hamza;
Awan, Arif;
Yang, Song;
Zhang, Simo;
Liu, Lixue;
Lu, Meng;
O'Connor‐McCourt, Maureen;
Purisima, Enrico O;
Wang, Edwin

Publication type:

Article

Evolvable signaling networks of receptor tyrosine kinases: relevance of robustness to malignancy and to cancer therapy.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100195

By:

Amit, Ido;
Wides, Ron;
Yarden, Yosef

Publication type:

Article

Capturing cell-fate decisions from the molecular signatures of a receptor-dependent signaling response.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100197

By:

Kumar, Dhiraj;
Srikanth, Ravichandran;
Ahlfors, Helena;
Lahesmaa, Riitta;
Rao, Kanury V S

Publication type:

Article

Systems metabolic engineering of Escherichia coli for L-threonine production.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100196

By:

Lee, Kwang Ho;
Park, Jin Hwan;
Kim, Tae Yong;
Kim, Hyun Uk;
Lee, Sang Yup

Publication type:

Article

q-bio 2007: a watershed moment in modern biology.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100193

By:

Edwards, Jeremy S;
Faeder, James R;
Hlavacek, William S;
Jiang, Yi;
Nemenman, Ilya;
Wall, Michael E

Publication type:

Article

A modular network model of aging.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100189

By:

Xue, Huiling;
Xian, Bo;
Dong, Dong;
Xia, Kai;
Zhu, Shanshan;
Zhang, Zhongnan;
Hou, Lei;
Zhang, Qingpeng;
Zhang, Yi;
Han, Jing‐Dong J

Publication type:

Article

The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100186

By:

Grimbs, Sergio;
Selbig, Joachim;
Bulik, Sascha;
Holzhütter, Hermann‐Georg;
Steuer, Ralf

Publication type:

Article

The complexities of antibiotic action.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100184

By:

Hancock, Robert E W

Publication type:

Article

Protein subnetwork markers improve prediction of cancer outcome.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100183

By:

Auffray, Charles

Publication type:

Article

Regulation of gene expression by small non-coding RNAs: a quantitative view.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100181

By:

Shimoni, Yishai;
Friedlander, Gilgi;
Hetzroni, Guy;
Niv, Gali;
Altuvia, Shoshy;
Biham, Ofer;
Margalit, Hanah

Publication type:

Article

Systems biology in human health and disease.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100175

By:

Lemberger, Thomas

Publication type:

Article

Programming gene expression with combinatorial promoters.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100187

By:

Cox, Robert Sidney;
Surette, Michael G;
Elowitz, Michael B

Publication type:

Article

Ligand-dependent responses of the ErbB signaling network: experimental and modeling analyses.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100188

By:

Birtwistle, Marc R;
Hatakeyama, Mariko;
Yumoto, Noriko;
Ogunnaike, Babatunde A;
Hoek, Jan B;
Kholodenko, Boris N

Publication type:

Article

Accurate prediction of gene feedback circuit behavior from component properties.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100185

By:

Rosenfeld, Nitzan;
Young, Jonathan W;
Alon, Uri;
Swain, Peter S;
Elowitz, Michael B

Publication type:

Article

Network-based classification of breast cancer metastasis.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100180

By:

Chuang, Han‐Yu;
Lee, Eunjung;
Liu, Yu‐Tsueng;
Lee, Doheon;
Ideker, Trey

Publication type:

Article

PhosphoPep—a phosphoproteome resource for systems biology research in Drosophila Kc167 cells.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 1, doi. 10.1038/msb4100182

By:

Bodenmiller, Bernd;
Malmstrom, Johan;
Gerrits, Bertran;
Campbell, David;
Lam, Henry;
Schmidt, Alexander;
Rinner, Oliver;
Mueller, Lukas N;
Shannon, Paul T;
Pedrioli, Patrick G;
Panse, Christian;
Lee, Hoo‐Keun;
Schlapbach, Ralph;
Aebersold, Ruedi

Publication type:

Article

Comparative proteomic and transcriptomic profiling of the fission yeast Schizosaccharomyces pombe.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 79, doi. 10.1038/msb4100117

By:

Schmidt, Michael W;
Houseman, Andres;
Ivanov, Alexander R;
Wolf, Dieter A

Publication type:

Article

Noise in timing and precision of gene activities in a genetic cascade.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 71, doi. 10.1038/msb4100113

By:

Amir, Amnon;
Kobiler, Oren;
Rokney, Assaf;
Oppenheim, Amos B;
Stavans, Joel

Publication type:

Article

Tissue-specific regulatory elements in mammalian promoters.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 73, doi. 10.1038/msb4100114

By:

Smith, Andrew D;
Sumazin, Pavel;
Zhang, Michael Q

Publication type:

Article

Reconstructing dynamic regulatory maps.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 74, doi. 10.1038/msb4100115

By:

Ernst, Jason;
Vainas, Oded;
Harbison, Christopher T;
Simon, Itamar;
Bar‐Joseph, Ziv

Publication type:

Article

Chemical combination effects predict connectivity in biological systems.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 80, doi. 10.1038/msb4100116

By:

Lehár, Joseph;
Zimmermann, Grant R;
Krueger, Andrew S;
Molnar, Raymond A;
Ledell, Jebediah T;
Heilbut, Adrian M;
Short, Glenn F;
Giusti, Leanne C;
Nolan, Garry P;
Magid, Omar A;
Lee, Margaret S;
Borisy, Alexis A;
Stockwell, Brent R;
Keith, Curtis T

Publication type:

Article

Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 72, doi. 10.1038/msb4100112

By:

Hooper, Sean D;
Boué, Stephanie;
Krause, Roland;
Jensen, Lars J;
Mason, Christopher E;
Ghanim, Murad;
White, Kevin P;
Furlong, Eileen EM;
Bork, Peer

Publication type:

Article

Size matters: network inference tackles the genome scale.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 77, doi. 10.1038/msb4100118

By:

Hayete, Boris;
Gardner, Timothy S;
Collins, James J

Publication type:

Article

Breaking proteins with mutations: threads and thresholds in evolution.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 76, doi. 10.1038/msb4100119

By:

Bloom, Jesse D;
Arnold, Frances H;
Wilke, Claus O

Publication type:

Article

How to infer gene networks from expression profiles.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 78, doi. 10.1038/msb4100120

By:

Bansal, Mukesh;
Belcastro, Vincenzo;
Ambesi‐Impiombato, Alberto;
di Bernardo, Diego

Publication type:

Article

Random timing in signaling cascades.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 81, doi. 10.1038/msb4100121

By:

Pedraza, Juan M;
Paulsson, Johan

Publication type:

Article

ZOOMING IN: a new high-resolution gene expression atlas of the brain.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 75, doi. 10.1038/msb4100122

By:

Jessberger, Sebastian;
Gage, Fred H

Publication type:

Article

The gene and the genon concept: a functional and information-theoretic analysis.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 87, doi. 10.1038/msb4100123

By:

Scherrer, Klaus;
Jost, Jürgen

Publication type:

Article

Computational analysis of the synergy among multiple interacting genes.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 83, doi. 10.1038/msb4100124

By:

Anastassiou, Dimitris

Publication type:

Article

A network biology approach to prostate cancer.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 82, doi. 10.1038/msb4100125

By:

Ergün, Ayla;
Lawrence, Carolyn A;
Kohanski, Michael A;
Brennan, Timothy A;
Collins, James J

Publication type:

Article

A systems biology dynamical model of mammalian G<sub>1</sub> cell cycle progression.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 84, doi. 10.1038/msb4100126

By:

Haberichter, Thomas;
Mädge, Britta;
Christopher, Renee A;
Yoshioka, Naohisa;
Dhiman, Anjali;
Miller, Robert;
Gendelman, Rina;
Aksenov, Sergej V;
Khalil, Iya G;
Dowdy, Steven F

Publication type:

Article

Backup without redundancy: genetic interactions reveal the cost of duplicate gene loss.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 86, doi. 10.1038/msb4100127

By:

Ihmels, Jan;
Collins, Sean R;
Schuldiner, Maya;
Krogan, Nevan J;
Weissman, Jonathan S

Publication type:

Article

Functioning and robustness of a bacterial circadian clock.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 90, doi. 10.1038/msb4100128

By:

Clodong, Sébastien;
Dühring, Ulf;
Kronk, Luiza;
Wilde, Annegret;
Axmann, Ilka;
Herzel, Hanspeter;
Kollmann, Markus

Publication type:

Article

Network-based prediction of protein function.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 88, doi. 10.1038/msb4100129

By:

Sharan, Roded;
Ulitsky, Igor;
Shamir, Ron

Publication type:

Article

Dynamical signatures of cellular fluctuations and oscillator stability in peripheral circadian clocks.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 93, doi. 10.1038/msb4100130

By:

Rougemont, Jacques;
Naef, Felix

Publication type:

Article

Metabolic modeling of a mutualistic microbial community.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 92, doi. 10.1038/msb4100131

By:

Stolyar, Sergey;
Van Dien, Steve;
Hillesland, Kristina Linnea;
Pinel, Nicolas;
Lie, Thomas J;
Leigh, John A;
Stahl, David A

Publication type:

Article

Higher order structure in the cancer transcriptome and systems medicine.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 94, doi. 10.1038/msb4100132

By:

Liu, Edison T;
Lemberger, Thomas

Publication type:

Article

Networks from drug–drug surfaces.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 85, doi. 10.1038/msb4100133

By:

Yeh, Pamela;
Kishony, Roy

Publication type:

Article

Large-scale mapping of human protein–protein interactions by mass spectrometry.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 89, doi. 10.1038/msb4100134

By:

Ewing, Rob M;
Chu, Peter;
Elisma, Fred;
Li, Hongyan;
Taylor, Paul;
Climie, Shane;
McBroom‐Cerajewski, Linda;
Robinson, Mark D;
O'Connor, Liam;
Li, Michael;
Taylor, Rod;
Dharsee, Moyez;
Ho, Yuen;
Heilbut, Adrian;
Moore, Lynda;
Zhang, Shudong;
Ornatsky, Olga;
Bukhman, Yury V;
Ethier, Martin;
Sheng, Yinglun

Publication type:

Article

Gyrase inhibitors induce an oxidative damage cellular death pathway in Escherichia coli.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 91, doi. 10.1038/msb4100135

By:

Dwyer, Daniel J;
Kohanski, Michael A;
Hayete, Boris;
Collins, James J

Publication type:

Article

Sorting out interphase microtubules.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 95, doi. 10.1038/msb4100136

By:

Carazo‐Salas, Rafael;
Nurse, Paul

Publication type:

Article

Prediction of phenotype and gene expression for combinations of mutations.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 96, doi. 10.1038/msb4100137

By:

Carter, Gregory W;
Prinz, Susanne;
Neou, Christine;
Shelby, J Patrick;
Marzolf, Bruz;
Thorsson, Vesteinn;
Galitski, Timothy

Publication type:

Article

Hubs in biological interaction networks exhibit low changes in expression in experimental asthma.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 98, doi. 10.1038/msb4100138

By:

Lu, Xin;
Jain, Vipul V;
Finn, Patricia W;
Perkins, David L

Publication type:

Article

Flexibility in energy metabolism supports hypoxia tolerance in Drosophila flight muscle: metabolomic and computational systems analysis.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 99, doi. 10.1038/msb4100139

By:

Feala, Jacob D;
Coquin, Laurence;
McCulloch, Andrew D;
Paternostro, Giovanni

Publication type:

Article

Inferring condition-specific transcription factor function from DNA binding and gene expression data.

Published in:

Molecular Systems Biology, 2007, v. 3, n. 1, p. 100, doi. 10.1038/msb4100140

By:

McCord, Rachel Patton;
Berger, Michael F;
Philippakis, Anthony A;
Bulyk, Martha L

Publication type:

Article