Works matching IS 17417007 AND DT 2024 AND VI 22 AND IP 1

Results: 293

Spatiotemporal characterization of extracellular matrix maturation in human artificial stromal-epithelial tissue substitutes.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02065-y

By:

Ávila-Fernández, Paula;
Etayo-Escanilla, Miguel;
Sánchez-Porras, David;
Fernández-Valadés, Ricardo;
Campos, Fernando;
Garzón, Ingrid;
Carriel, Víctor;
Alaminos, Miguel;
García-García, Óscar Darío;
Chato-Astrain, Jesús

Publication type:

Article

Building an eDNA surveillance toolkit for invasive rodents on islands: can we detect wild-type and gene drive Mus musculus?

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02063-0

By:

Piaggio, Antoinette J.;
Gierus, Luke;
Taylor, Daniel R.;
Holmes, Nick D.;
Will, David J.;
Gemmell, Neil J.;
Thomas, Paul Q.

Publication type:

Article

Rotating culture regulates the formation of HepaRG-derived liver organoids via YAP translocation.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02062-1

By:

Zhong, Shaoyu;
Zheng, Lu;
Wu, Yi;
Sun, Shujin;
Luo, Qing;
Song, Guanbin;
Lü, Dongyuan;
Long, Mian

Publication type:

Article

T4Seeker: a hybrid model for type IV secretion effectors identification.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02064-z

By:

Li, Jing;
He, Shida;
Zhang, Jian;
Zhang, Feng;
Zou, Quan;
Ni, Fengming

Publication type:

Article

CRBPSA: CircRNA-RBP interaction sites identification using sequence structural attention model.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02055-0

By:

Cao, Chao;
Wang, Chunyu;
Dai, Qi;
Zou, Quan;
Wang, Tao

Publication type:

Article

Unveiling tryptophan dynamics and functions across model organisms via quantitative imaging.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02058-x

By:

Wang, Kui;
Chen, Tian-lun;
Zhang, Xin-xin;
Cao, Jian-bin;
Wang, Pengcheng;
Wang, Mingcang;
Du, Jiu-lin;
Mu, Yu;
Tao, Rongkun

Publication type:

Article

Beyond Lux: methods for species and photoreceptor-specific quantification of ambient light for mammals.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02038-1

By:

McDowell, Richard J.;
Didikoglu, Altug;
Woelders, Tom;
Gatt, Mazie J.;
Moffatt, Finn;
Notash, Saba;
Hut, Roelof A.;
Brown, Timothy M.;
Lucas, Robert J.

Publication type:

Article

Uncovering bacterial-mammalian cell interactions via single-cell tracking.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02056-z

By:

Dewangan, Narendra K.;
Mohiuddin, Sayed Golam;
Sensenbach, Shayne;
Karki, Prashant;
Orman, Mehmet A.

Publication type:

Article

High-resolution chromosome-level genome of Scylla paramamosain provides molecular insights into adaptive evolution in crabs.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02054-1

By:

Zhang, Yin;
Yuan, Ye;
Zhang, Mengqian;
Yu, Xiaoyan;
Qiu, Bixun;
Wu, Fangchun;
Tocher, Douglas R.;
Zhang, Jiajia;
Ye, Shaopan;
Cui, Wenxiao;
Leung, Jonathan Y. S.;
Ikhwanuddin, Mhd;
Waqas, Waqas;
Dildar, Tariq;
Ma, Hongyu

Publication type:

Article

Widespread 3′UTR capped RNAs derive from G-rich regions in proximity to AGO2 binding sites.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02032-7

By:

Haberman, Nejc;
Digby, Holly;
Faraway, Rupert;
Cheung, Rebecca;
Chakrabarti, Anob M.;
Jobbins, Andrew M.;
Parr, Callum;
Yasuzawa, Kayoko;
Kasukawa, Takeya;
Yip, Chi Wai;
Kato, Masaki;
Takahashi, Hazuki;
Carninci, Piero;
Vernia, Santiago;
Ule, Jernej;
Sibley, Christopher R.;
Martinez-Sanchez, Aida;
Lenhard, Boris

Publication type:

Article

Novel function of single-target regulator NorR involved in swarming motility and biofilm formation revealed in Vibrio alginolyticus.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02057-y

By:

Chen, Tongxian;
Zhou, Xiaoling;
Feng, Ruonan;
Shi, Shuhao;
Chen, Xiyu;
Wei, Bingqi;
Hu, Zhong;
Peng, Tao

Publication type:

Article

Meta‑analysis of the human upper respiratory tract microbiome reveals robust taxonomic associations with health and disease.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-01887-0

By:

Quinn‑Bohmann, Nick;
Freixas‑Coutin, Jose A.;
Seo, Jin;
Simmons, Ruth;
Diener, Christian;
Gibbons, Sean M.

Publication type:

Article

Listeria-vectored cervical cancer vaccine candidate strains reduce MDSCs via the JAK-STAT signaling pathway.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-01876-3

By:

Yunwen Zhang;
Yao Lei;
Qian Ou;
Mengdie Chen;
Sicheng Tian;
Jing Tang;
Ruidan Li;
Qian Liang;
Zhaobin Chen;
Chuan Wang

Publication type:

Article

A powerful and versatile new fixation protocol for immunostaining and in situ hybridization that preserves delicate tissues.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02052-3

By:

Guerrero-Hernández, Carlos;
Doddihal, Viraj;
Mann Jr., Frederick G.;
Sánchez Alvarado, Alejandro

Publication type:

Article

Hibernation reduces GABA signaling in the brainstem to enhance motor activity of breathing at cool temperatures.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02050-5

By:

Saunders, Sandy E.;
Santin, Joseph M.

Publication type:

Article

Cold snaps lead to a 5-fold increase or a 3-fold decrease in disease proliferation depending on the baseline temperature.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02041-6

By:

McCartan, Niamh;
Piggott, Jeremy;
DiCarlo, Sadie;
Luijckx, Pepijn

Publication type:

Article

Evolutionary divergent clusters of transcribed extinct truncated retroposons drive low mRNA expression and developmental regulation in the protozoan Leishmania.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02051-4

By:

Ferreira, Gabriel Reis;
Emond-Rheault, Jean-Guillaume;
Alves, Lysangela;
Leprohon, Philippe;
Smith, Martin A.;
Papadopoulou, Barbara

Publication type:

Article

Bridging chemical structure and conceptual knowledge enables accurate prediction of compound-protein interaction.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02049-y

By:

Tao, Wen;
Lin, Xuan;
Liu, Yuansheng;
Zeng, Li;
Ma, Tengfei;
Cheng, Ning;
Jiang, Jing;
Zeng, Xiangxiang;
Yuan, Sisi

Publication type:

Article

Hoxa5 alleviates adipose tissue metabolic distortions in high-fat diet mice associated with a reduction in MERC.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02047-0

By:

Chen, Qi;
Ren, Zeyu;
Dang, Liping;
Liu, Zunhai;
Wang, Simeng;
Chen, Xinhao;
Qiu, Guiping;
Sun, Chao

Publication type:

Article

SETDB1 targeting SESN2 regulates mitochondrial damage and oxidative stress in renal ischemia–reperfusion injury.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02048-z

By:

Xia, Kang;
Hui, Yumin;
Zhang, Long;
Qiu, Qiangmin;
Zhong, Jiacheng;
Chen, Hui;
Liu, Xiuheng;
Wang, Lei;
Chen, Zhiyuan

Publication type:

Article

Independent, but still observant—dog breeds selected for functional independence learn better from a conspecific demonstrator than cooperative breeds in a detour task.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02046-1

By:

Lugosi, Csenge Anna;
Udvarhelyi-Tóth, Kata Mária;
Dobos, Petra;
Pongrácz, Péter

Publication type:

Article

Thymosin β4 promotes zebrafish Mauthner axon regeneration by facilitating actin polymerization through binding to G-actin.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02045-2

By:

Song, Zheng;
Han, Along;
Hu, Bing

Publication type:

Article

Breaking muscle: neurotoxic and myotoxic effects of Central American snake venoms and the relative efficacies of antivenom and varespladib.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02044-3

By:

Jones, Lee;
Lay, Mimi;
Neri-Castro, Edgar;
Zarzosa, Vanessa;
Hodgson, Wayne C.;
Lewin, Matthew;
Fry, Bryan G.

Publication type:

Article

MdSVWC1, a new pattern recognition receptor triggers multiple defense mechanisms against invading bacteria in Musca domestica.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02042-5

By:

Tang, Ting;
Sun, Siyu;
Wang, Ruirui;
Li, Mengnan;
Wang, Yongpeng;
Li, Feifei;
Wang, Yun;
Liu, Fengsong

Publication type:

Article

New insights into the phylogenetic relationships within the Lauraceae from mitogenomes.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02040-7

By:

Song, Yu;
Yu, Qun-Fei;
Zhang, Di;
Chen, Li-Gang;
Tan, Yun-Hong;
Zhu, Wen;
Su, Hua-Long;
Yao, Xin;
Liu, Chao;
Corlett, Richard T.

Publication type:

Article

Seasonal stability of the rumen microbiome contributes to the adaptation patterns to extreme environmental conditions in grazing yak and cattle.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02035-4

By:

Guo, Wei;
Zhou, Mi;
Li, Fuyong;
Neves, André Luis Alves;
Ma, Tao;
Bi, Sisi;
Wang, Weiwei;
Long, Ruijun;
Guan, Le Luo

Publication type:

Article

Dual RNA-seq reveals distinct families of co-regulated and structurally conserved effectors in Botrytis cinerea infection of Arabidopsis thaliana.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02043-4

By:

Wei, Jinfeng;
Zhou, Qian;
Zhang, Jing;
Wu, Mingde;
Li, Guoqing;
Yang, Long

Publication type:

Article

Molecular mechanisms underlying the neural correlates of working memory.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02039-0

By:

Xu, Xiaotao;
Zhao, Han;
Song, Yu;
Cai, Huanhuan;
Zhao, Wenming;
Tang, Jin;
Zhu, Jiajia;
Yu, Yongqiang

Publication type:

Article

Author Correction: The m6A writer KIAA1429 regulates photoaging progression via MFAP4-dependent collagen synthesis.

Published in:

2024

By:

Liu, Yuanyuan;
Li, Jian;
Wang, Chenhui;
Li, Jiangbo;
Luo, Kai;
Tao, Kang;
Tian, Yuan;
Song, Xiang;
Zhai, Zhifang;
Tao, Yuandong;
You, Jia;
Wu, Lihua;
Li, Wenqian;
Jiao, Yuanyuan;
Yang, Rongya;
Zhang, Mingwang

Publication type:

Correction Notice

Pangolin scales as adaptations for innate immunity against pathogens.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02034-5

By:

Tian, Xuechen;
Chen, Li;
Zhou, Jinfeng;
Wang, Enbo;
Wang, Mu;
Jakubovics, Nicholas;
Li, Jing;
Song, Kunping;
Lau, King Tong;
Koepfli, Klaus-Peter;
Zhang, Siyuan;
Tan, Geok Yuan Annie;
Yang, Yixin;
Choo, Siew Woh

Publication type:

Article

Identifying effective evolutionary strategies-based protocol for uncovering reaction kinetic parameters under the effect of measurement noises.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02019-4

By:

Yeo, Hock Chuan;
Vijay, Varsheni;
Selvarajoo, Kumar

Publication type:

Article

Pangolin scales as adaptations for innate immunity against pathogens.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02034-5

By:

Tian, Xuechen;
Chen, Li;
Zhou, Jinfeng;
Wang, Enbo;
Wang, Mu;
Jakubovics, Nicholas;
Li, Jing;
Song, Kunping;
Lau, King Tong;
Koepfli, Klaus-Peter;
Zhang, Siyuan;
Tan, Geok Yuan Annie;
Yang, Yixin;
Choo, Siew Woh

Publication type:

Article

DrugDAGT: a dual-attention graph transformer with contrastive learning improves drug-drug interaction prediction.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02030-9

By:

Chen, Yaojia;
Wang, Jiacheng;
Zou, Quan;
Niu, Mengting;
Ding, Yijie;
Song, Jiangning;
Wang, Yansu

Publication type:

Article

Juvenile hormone signaling is indispensable for late embryogenesis in ametabolous and hemimetabolous insects.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02029-2

By:

Lv, Ya-Nan;
Zeng, Mei;
Yan, Zi-Yu;
Zhang, Pei-Yan;
Ban, Ning;
Yuan, Dong-Wei;
Li, Sheng;
Luan, Yun-Xia;
Bai, Yu

Publication type:

Article

Author Correction: Identification and characterization of a set of conserved and new regulators of cytoskeletal organization, cell morphology and migration.

Published in:

2024

By:

Bai, Siau Wei;
Herrera-Abreu, Maria Teresa;
Rohn, Jennifer L;
Racine, Victor;
Tajadura, Virginia;
Suryavanshi, Narendra;
Bechtel, Stephanie;
Wiemann, Stefan;
Baum, Buzz;
Ridley, Anne J

Publication type:

Correction Notice

Ecological adaptations of amphibians to environmental changes along an altitudinal gradient (Case Study: Bufo gargarizans) from phenotypic and genetic perspectives.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02033-6

By:

Niu, Yonggang;
Zhang, Xuejing;
Zhang, Haiying;
Men, Shengkang;
Xu, Tisen;
Ding, Li;
Li, Xiangyong;
Wang, Lei;
Wang, Huisong;
Storey, Kenneth B.;
Chen, Qiang

Publication type:

Article

The evolution of ectomycorrhizal symbiosis and host-plant switches are the main drivers for diversification of Amanitaceae (Agaricales, Basidiomycota).

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02031-8

By:

Cai, Qing;
Codjia, Jean Evans I.;
Buyck, Bart;
Cui, Yang-Yang;
Ryberg, Martin;
Yorou, Nourou S.;
Yang, Zhu L.

Publication type:

Article

Rapid evolution of mitochondrion-related genes in haplodiploid arthropods.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02027-4

By:

Li, Yiyuan;
Thomas, Gregg W. C.;
Richards, Stephen;
Waterhouse, Robert M.;
Zhou, Xin;
Pfrender, Michael E.

Publication type:

Article

TransCDR: a deep learning model for enhancing the generalizability of drug activity prediction through transfer learning and multimodal data fusion.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02023-8

By:

Xia, Xiaoqiong;
Zhu, Chaoyu;
Zhong, Fan;
Liu, Lei

Publication type:

Article

DrugReAlign: a multisource prompt framework for drug repurposing based on large language models.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02028-3

By:

Wei, Jinhang;
Zhuo, Linlin;
Fu, Xiangzheng;
Zeng, XiangXiang;
Wang, Li;
Zou, Quan;
Cao, Dongsheng

Publication type:

Article

Prediction of homologous recombination deficiency from routine histology with attention-based multiple instance learning in nine different tumor types.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02022-9

By:

Loeffler, Chiara Maria Lavinia;
El Nahhas, Omar S. M.;
Muti, Hannah Sophie;
Carrero, Zunamys I.;
Seibel, Tobias;
van Treeck, Marko;
Cifci, Didem;
Gustav, Marco;
Bretz, Kevin;
Gaisa, Nadine T.;
Lehmann, Kjong-Van;
Leary, Alexandra;
Selenica, Pier;
Reis-Filho, Jorge S.;
Ortiz-Bruechle, Nadina;
Kather, Jakob Nikolas

Publication type:

Article

The marine environmental microbiome mediates physiological outcomes in host nematodes.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02021-w

By:

Xue, Yiming;
Xie, Yusu;
Cao, Xuwen;
Zhang, Liusuo

Publication type:

Article

Global analysis of neuropeptide receptor conservation across phylum Nematoda.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02017-6

By:

Golinelli, Luca;
Geens, Ellen;
Irvine, Allister;
McCoy, Ciaran J.;
Vandewyer, Elke;
Atkinson, Louise E.;
Mousley, Angela;
Temmerman, Liesbet;
Beets, Isabel

Publication type:

Article

VEGF-dependent testicular vascularisation involves MEK1/2 signalling and the essential angiogenesis factors, SOX7 and SOX17.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02003-y

By:

Blücher, Rheannon O.;
Lim, Rachel S.;
Ritchie, Matthew E.;
Western, Patrick S.

Publication type:

Article

Grb7, Grb10 and Grb14, encoding the growth factor receptor-bound 7 family of signalling adaptor proteins have overlapping functions in the regulation of fetal growth and post-natal glucose metabolism.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02018-5

By:

Moorwood, Kim;
Smith, Florentia M.;
Garfield, Alastair S.;
Cowley, Michael;
Holt, Lowenna J.;
Daly, Roger J.;
Ward, Andrew

Publication type:

Article

OrgaMapper: a robust and easy-to-use workflow for analyzing organelle positioning.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02015-8

By:

Schmied, Christopher;
Ebner, Michael;
Samsó, Paula;
Van Der Veen, Rozemarijn;
Haucke, Volker;
Lehmann, Martin

Publication type:

Article

RNA silencing is a key regulatory mechanism in the biocontrol fungus Clonostachys rosea-wheat interactions.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02014-9

By:

Piombo, Edoardo;
Vetukuri, Ramesh Raju;
Konakalla, Naga Charan;
Kalyandurg, Pruthvi B.;
Sundararajan, Poorva;
Jensen, Dan Funck;
Karlsson, Magnus;
Dubey, Mukesh

Publication type:

Article

Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing data.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02020-x

By:

Zhang, Junpeng;
Liu, Lin;
Wei, Xuemei;
Zhao, Chunwen;
Luo, Yanbi;
Li, Jiuyong;
Le, Thuc Duy

Publication type:

Article

Author Correction: Plancitoxin-1 mediates extracellular trap evasion by the parasitic helminth Trichinella spiralis.

Published in:

2024

By:

Ding, Jing;
Xu, Ning;
Wang, Jing;
He, Yushu;
Wang, Xuelin;
Liu, Mingyuan;
Liu, Xiaolei

Publication type:

Correction Notice

Expanded gene and taxon sampling of diplomonads shows multiple switches to parasitic and free-living lifestyle.

Published in:

BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02013-w

By:

Wiśniewska, Monika M.;
Salomaki, Eric D.;
Silberman, Jeffrey D.;
Terpis, Kristina X.;
Mazancová, Eva;
Táborský, Petr;
Jinatham, Vasana;
Gentekaki, Eleni;
Čepička, Ivan;
Kolisko, Martin

Publication type:

Article