Works in Frontiers in Genetics, 2025

Results: 159

Exploring the underlying molecular connections: a bioinformatics approach to link melanoma and Parkinson's disease.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1526018
By:
- Zhang, Limei;
- Li, Dailin;
- Zheng, Xu;
- Wu, Moli;
- Yao, Qijun;
- Chen, Haoran;
- Ye, Zhiqiang;
- Yuan, Bo
Publication type:
Article
Editorial: Integrative genetics and multi-omics of complex human disorders.
Published in:
2025
By:
- Gui, Hongsheng;
- Lessard, Christopher J.;
- Liu, Jinhui;
- Li, Miaoxin;
- Adrianto, Indra
Publication type:
Editorial
Comprehensive analysis of non-coding RNA-mediated endothelial cell-specific regulatory circuits in coronary artery disease risk.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1559798
By:
- Huang, Boshui;
- Lai, Zhijie;
- Wang, Xiaoyu;
- Zhang, Qinhao;
- Hu, Tingting;
- Yu, Fulong;
- Zhou, Shuxian;
- Zhang, Yan;
- Meng, Juan
Publication type:
Article
Exploration of cfDNA landscape in NIPT and clinical utilities of cfDNA based gene expression inference in prenatal diagnostics.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1527884
By:
- Jia, Ruo;
- Zhu, Jianjiang;
- Zhang, Feng;
- Sun, Yangbo;
- Zhang, Bin;
- Du, Yang;
- Qi, Hong
Publication type:
Article
LINC00461 SNPs rs933647 and rs201864123 modify the risk of adenoid hypertrophy susceptibility for children in South China.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1509053
By:
- Hou, Chao;
- Luo, Xilian;
- Wan, Xin;
- Chen, Kaining;
- Xian, Zhongren;
- Xu, Kaixiong;
- Zeng, Yingjia;
- Wang, Chenlu;
- Yang, Wan;
- Zheng, Zilin;
- Lin, Yueling;
- Lu, Zhaojin;
- Chen, Yanqiu;
- Che, Di;
- Gu, Xiaoqiong
Publication type:
Article
Corrigendum: Integrated network analysis to identify key modules and potential hub genes involved in bovine respiratory disease: a systems biology approach.
Published in:
2025
By:
- Hasankhani, Aliakbar;
- Bahrami, Abolfazl;
- Sheybani, Negin;
- Fatehi, Farhang;
- Abadeh, Roxana;
- Ghaem Maghami Farahani, Hamid;
- Bahreini Behzadi, Mohammad Reza;
- Javanmard, Ghazaleh;
- Isapour, Sadegh;
- Khadem, Hosein;
- Barkema, Herman W.
Publication type:
Correction Notice
Correlation and clinical significance of GSTP1 hypermethylation in hepatocellular carcinoma: a systematic review and meta-analysis.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1543261
By:
- Li, Pengfei;
- He, Lei;
- Zhang, Chunxia;
- Huang, Xinyao;
- Sun, Rong;
- Zhang, Yan;
- Wang, Yan
Publication type:
Article
Deciphering the role of CNIH4 in pan-cancer landscapes and its significance in breast cancer progression.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1536620
By:
- Xu, Yao;
- Lai, Zengzhen;
- Li, Chaolin
Publication type:
Article
EDN1 and NTF3 in keloid pathogenesis: computational and experimental evidence as novel diagnostic biomarkers for fibrosis and inflammation.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1516451
By:
- Gong, Hui;
- Liu, Jing;
- Chen, Nanji;
- Zhao, Hengguang;
- He, Bailin;
- Zhang, Hongpei;
- Wang, Wenping;
- Tian, Yi
Publication type:
Article
High-throughput microRNA sequencing in the developing branchial arches suggests miR-92b-3p regulation of a cardiovascular gene network.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1514925
By:
- Goldsworthy, Sian;
- Losa, Marta;
- Bobola, Nicoletta;
- Griffiths-Jones, Sam
Publication type:
Article
Comprehensive systematic review and meta-analysis of the TGF-β1 T869C gene polymorphism and autoimmune disease susceptibility.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1502921
By:
- Zhu, Yawen;
- Qian, Ai;
- Cheng, Yuanyuan;
- Li, Ming;
- Huang, Chuanbing
Publication type:
Article
Calculating maternal polygenic risk scores from prenatal screening by cell-free DNA data.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1495604
By:
- Corey, Victoria;
- Chavez, Mauro;
- Qasim, Layla;
- Dincer, Tevfik U.;
- Henry, Angela;
- Bagayan, Salome;
- Treadup, Sasha;
- Mehan, Mike;
- de Feo, Eileen;
- Kim, Sung
Publication type:
Article
Editorial: Advancements and prospects of genome-wide association studies.
Published in:
2025
By:
- Doumatey, Ayo P.;
- Li, Yafang;
- Fernandez-Lopez, Juan Carlos
Publication type:
Editorial
Integrated Network Analysis to Identify Key Modules and Potential Hub Genes Involved in Bovine Respiratory Disease: A Systems Biology Approach.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2021.753839
By:
- Hasankhani, Aliakbar;
- Bahrami, Abolfazl;
- Sheybani, Negin;
- Fatehi, Farhang;
- Abadeh, Roxana;
- Ghaem Maghami Farahani, Hamid;
- Bahreini Behzadi, Mohammad Reza;
- Javanmard, Ghazaleh;
- Isapour, Sadegh;
- Khadem, Hosein;
- Barkema, Herman W.
Publication type:
Article
Corrigendum: Construction of a circRNA–lincRNA–lncRNA–miRNA–mRNA ceRNA regulatory network identifies genes and pathways linked to goat fertility.
Published in:
2025
By:
- Ghafouri, Farzad;
- Sadeghi, Mostafa;
- Bahrami, Abolfazl;
- Naserkheil, Masoumeh;
- Dehghanian Reyhan, Vahid;
- Javanmard, Arash;
- Miraei-Ashtiani, Seyed Reza;
- Ghahremani, Soheila;
- Barkema, Herman W.;
- Abdollahi-Arpanahi, Rostam;
- Kastelic, John P.
Publication type:
Correction Notice
Identification of cancer-associated fibroblast signature genes for prognostic prediction in colorectal cancer.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1476092
By:
- Jin, Wei;
- Lu, Yuchang;
- Lu, Jingen;
- Wang, Zhenyi;
- Yan, Yixin;
- Liang, Biao;
- Qian, Shiwei;
- Ni, Jiachun;
- Yang, Yiheng;
- Huang, Shuo;
- Han, Changpeng;
- Yang, Haojie
Publication type:
Article
Editorial: Recent advances in causes, diagnosis, and therapeutics for congenital heart defects.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1564492
By:
- Xu, Xinxiu;
- Lo, Cecilia W.;
- Martin, Lisa J.;
- Han, Lu;
- Xu, Dongzhu
Publication type:
Article
Editorial: Challenges and prospects for conservation genetics at XXI century.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1554590
By:
- Amavet, Patricia;
- Fernández, Gabriela P.;
- Solís Neffa, Viviana
Publication type:
Article
Corrigendum: Zearalenone exposure enhanced the expression of tumorigenesis genes in donkey granulosa cells via the PTEN/PI3K/AKT signaling pathway.
Published in:
2025
By:
- Zhang, Guo-Liang;
- Song, Jun-Lin;
- Ji, Chuan-Liang;
- Feng, Yu-Long;
- Yu, Jie;
- Nyachoti, Charles M.;
- Yang, Gong-She
Publication type:
Correction Notice
WCSGNet: a graph neural network approach using weighted cell-specific networks for cell-type annotation in scRNA-seq.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1553352
By:
- Wang, Yi-Ran;
- Du, Pu-Feng
Publication type:
Article
Case report: A novel intronic JMJD6 likely pathogenic variant (c.941+75G > T) associated with congenital eyelid coloboma in one of the identical twin sisters.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1536000
By:
- Li, Xin;
- Zhang, Yuqi;
- Chai, Gang;
- Su, Weijie;
- Zhang, Yan
Publication type:
Article
Exploration and verification of circulating diagnostic biomarkers in osteoarthritis based on machine learning.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1513675
By:
- Wang, Xinyu;
- Liu, Tianyi;
- Sheng, Yueyang;
- Qiu, Cheng;
- Zhang, Yanzhuo;
- Liu, Yanqun;
- Wu, Chengai
Publication type:
Article
Exploring genetic loci linked to COVID-19 severity and immune response through multi-trait GWAS analyses.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1502839
By:
- Meng, Ziang;
- Zhang, Chumeng;
- Liu, Shuai;
- Li, Wen;
- Wang, Yue;
- Zhang, Qingyi;
- Peng, Bichen;
- Ye, Weiyi;
- Jiang, Yue;
- Song, Yingchao;
- Guo, Miao;
- Chang, Xiao;
- Shao, Lei
Publication type:
Article
Alteration of chromatin states perturb the transcription regulation of gene during hydronephrosis.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1396073
By:
- Wang, Xiao-Hui;
- Zhang, Shu-Feng;
- Wu, Hai-Ying;
- Gao, Jian;
- Wang, Lin;
- Yin, Yao;
- Wang, Xuhui
Publication type:
Article
Role of PD-L1 in mediating the effect of lipid on ulcerative colitis: a mediation Mendelian randomization study.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1390605
By:
- Li, Peihong;
- Wang, Yiwen;
- Hu, Hongyi;
- Sun, Boyun
Publication type:
Article
Construction of a circRNA– lincRNA–lncRNA–miRNA–mRNA ceRNA regulatory network identifies genes and pathways linked to goat fertility.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2023.1195480
By:
- Ghafouri, Farzad;
- Sadeghi, Mostafa;
- Bahrami, Abolfazl;
- Naserkheil, Masoumeh;
- Dehghanian Reyhan, Vahid;
- Javanmard, Arash;
- Miraei-Ashtiani, Seyed Reza;
- Ghahremani, Soheila;
- Barkema, Herman W.;
- Abdollahi-Arpanahi, Rostam;
- Kastelic, John P.
Publication type:
Article
Omics Multi-Layers Networks Provide Novel Mechanistic and Functional Insights Into Fat Storage and Lipid Metabolism in Poultry.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2021.646297
By:
- Ghafouri, Farzad;
- Bahrami, Abolfazl;
- Sadeghi, Mostafa;
- Miraei-Ashtiani, Seyed Reza;
- Bakherad, Maryam;
- Barkema, Herman W.;
- Larose, Samantha
Publication type:
Article
Zearalenone Exposure Enhanced the Expression of Tumorigenesis Genes in Donkey Granulosa Cells via the PTEN / PI3K / AKT Signaling Pathway.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2018.00293
By:
- Zhang, Guo-Liang;
- Song, Jun-Lin;
- Ji, Chuan-Liang;
- Feng, Yu-Long;
- Yu, Jie;
- Nyachoti, Charles M.;
- Yang, Gong-She
Publication type:
Article
Exploring the taxonomical and functional profiles of marine microorganisms in Submarine Groundwater Discharge vent water from Mabini, Batangas, Philippines through metagenome-assembled genomes.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1522253
By:
- Veluz, Joshua T.;
- Mallari, Laurence Anthony N.;
- Gloria, Paul Christian T.;
- Siringan, Maria Auxilia T.
Publication type:
Article
Editorial: Advances and trends in gene expression, regulation, and phenotypic variation in livestock science: a comprehensive review of methods and technologies.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1565301
By:
- Banerjee, Priyanka;
- de Lima, Andressa Oliveira;
- Nguyen, Loan T.;
- Diniz, Wellison J. S.
Publication type:
Article
Distinct gene signatures define the epithelial cell features of mucinous appendiceal neoplasms and pseudomyxoma metastases.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1536982
By:
- Ayala, Carlos;
- Sathe, Anuja;
- Bai, Xiangqi;
- Grimes, Susan M.;
- Shen, Jeanne;
- Poultsides, George A.;
- Lee, Byrne;
- Ji, Hanlee P.
Publication type:
Article
Genetic and metabolic characterization of individual differences in liver fat accumulation in Atlantic salmon.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1512769
By:
- Horn, Siri S.;
- Sonesson, Anna K.;
- Krasnov, Aleksei;
- Aslam, Muhammad L.;
- Hillestad, Borghild;
- Ruyter, Bente
Publication type:
Article
A comparison of design algorithms for choosing the training population in genomic models.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2024.1462855
By:
- Stadler, Alexandra;
- Müller, Werner G.;
- Futschik, Andreas
Publication type:
Article
Moss-pathogen interactions: a review of the current status and future opportunities.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1539311
By:
- Zhang, Huan;
- Yang, Qilin;
- Wang, Leyi;
- Liu, Huawei;
- Zhang, Daoyuan;
- Duan, Cheng-Guo;
- Li, Xiaoshuang
Publication type:
Article
Dual graph-embedded fusion network for predicting potential microbe-disease associations with sequence learning.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1511521
By:
- Wu, Junlong;
- Xiao, Liqi;
- Fan, Liu;
- Wang, Lei;
- Zhu, Xianyou
Publication type:
Article
ADAM-multi: software to simulate complex breeding programs for animals and plants with different ploidy levels and generalized genotypic effect models to account for multiple alleles.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1513615
By:
- Chu, Thinh Tuan;
- Jensen, Just
Publication type:
Article
Editorial: The non-coding RNA world in animals and plants.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1558406
By:
- Wang, Lingling;
- Hu, Bin;
- Han, Min-Jin;
- Zhou, Q.-Z.
Publication type:
Article
Sequencing whole genomes of the West Javanese population in Indonesia reveals novel variants and improves imputation accuracy.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2024.1492602
By:
- Ardiansyah, Edwin;
- Riza, Anca-Lelia;
- Dian, Sofiati;
- Ganiem, Ahmad Rizal;
- Alisjahbana, Bachti;
- Setiabudiawan, Todia P.;
- van Laarhoven, Arjan;
- van Crevel, Reinout;
- Kumar, Vinod
Publication type:
Article
Negative frequency-dependent selection through variations in seedling fitness due to genetic differentiation of parents' pair in a tropical rainforest tree, Rubroshorea curtisii (Dipterocarpaceae).
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1552024
By:
- Tani, Naoki;
- Ng, Chin Hong;
- Lee, Soon Leong;
- Lee, Chai Ting;
- Muhammad, Norwati;
- Kondo, Toshiaki;
- Tsumura, Yoshihiko;
- Sugiyama, Saori;
- Niiyama, Kaoru;
- Ripin, Azizi;
- Kassim, Abdul Rahman;
- Musa, Samsudin
Publication type:
Article
Noncoding RNA profiling in omentum adipose tissue from obese patients and the identification of novel metabolic biomarkers.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1533637
By:
- Zhang, Yongjiao;
- Chen, Ao;
- Lu, Sumei;
- Liu, Dong;
- Xuan, Xiaolei;
- Lei, Xiaofei;
- Zhong, Mingwei;
- Gao, Fei
Publication type:
Article
A structural genomics approach to investigate Dystrophin mutations and their impact on the molecular pathways of Duchenne muscular dystrophy.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1517707
By:
- Elasbali, Abdelbaset Mohamed;
- Anjum, Farah;
- AlKhamees, Osama A.;
- Abu Al-Soud, Waleed;
- Adnan, Mohd;
- Shamsi, Anas;
- Hassan, Md. Imtaiyaz
Publication type:
Article
Exploring the relationship between sepsis and Golgi apparatus dysfunction: bioinformatics insights and diagnostic marker discovery.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1483493
By:
- Ma, Wanli;
- Liu, Xinyi;
- Yu, Ran;
- Song, Jiannan;
- Hou, Lina;
- Guo, Ying;
- Wu, Hongwei;
- Feng, Dandan;
- Zhou, Qi;
- Li, Haibo
Publication type:
Article
Editorial: Towards the embedding of artificial intelligence into synthetic organisms: engineering intelligence in microorganisms.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1562092
By:
- Gutiérrez, Martín Eduardo;
- Lahoz-Beltrá, Rafael;
- Donayre-Torres, Alberto J.
Publication type:
Article
Genomic selection for resistance to one pathogenic strain of Vibrio splendidus in blue mussel Mytilus edulis.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2024.1487807
By:
- Ajithkumar, Munusamy;
- D'Ambrosio, Jonathan;
- Travers, Marie-Agnès;
- Morvezen, Romain;
- Degremont, Lionel
Publication type:
Article
Genome-wide identification of oat TCP gene family and expression patterns under abiotic stress.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1533562
By:
- Nie, Jiaming;
- Zhao, Hongbin;
- Guo, Xiaodong;
- Zhang, Tao;
- Han, Bing;
- Liu, Huiyan
Publication type:
Article
Systematic review and meta-analysis of the impact of abnormal expression of long non coding RNA on the prognosis of acute myeloid leukemia.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1524449
By:
- Liu, Guihong;
- Sun, Liangliang;
- Lv, Peng;
- Qiao, Rong;
- Wang, Lihang;
- Jin, Arong
Publication type:
Article
Enhancing the utility of polygenic scores in Alzheimer's disease through systematic curation and annotation.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1507395
By:
- Mwesigwa, Savannah;
- Dai, Yulin;
- Enduru, Nitesh;
- Zhao, Zhongming
Publication type:
Article
Circular RNA microarray expression profile and potential function of circDOCK1 in colorectal cancer.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1443876
By:
- Zhang, Guojing;
- Wu, Xiaoyan;
- Fu, Hongmin;
- Sun, Daqing
Publication type:
Article
Fresh-cut watermelon: postharvest physiology, technology, and opportunities for quality improvement.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1523240
By:
- Quandoh, Ebenezer;
- Albornoz, Karin
Publication type:
Article
Integrated analysis of M2 macrophage-related gene prognostic model and single-cell sequence to predict immunotherapy response in lung adenocarcinoma.
Published in:
Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1519677
By:
- Li, Meifang;
- Wang, Zhiping;
- Huang, Bin;
- Lai, Yanyun;
- Zhang, Meng;
- Lin, Cheng
Publication type:
Article