Works matching IS 16159853 AND DT 2016 AND VI 16 AND IP 15/16

Results: 24

Analysis of Drosophila melanogaster proteome dynamics during embryonic development by a combination of label-free proteomics approaches.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2068, doi. 10.1002/pmic.201500482

By:

Fabre, Bertrand;
Korona, Dagmara;
Groen, Arnoud;
Vowinckel, Jakob;
Gatto, Laurent;
Deery, Michael J.;
Ralser, Markus;
Russell, Steven;
Lilley, Kathryn S.

Publication type:

Article

Commercially available antibodies can be applied in quantitative multiplexed peptide immunoaffinity enrichment targeted mass spectrometry assays.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2141, doi. 10.1002/pmic.201500540

By:

Schoenherr, Regine M.;
Zhao, Lei;
Ivey, Richard G.;
Voytovich, Uliana J.;
Kennedy, Jacob;
Yan, Ping;
Lin, Chenwei;
Whiteaker, Jeffrey R.;
Paulovich, Amanda G.

Publication type:

Article

Application of wide selected-ion monitoring data-independent acquisition to identify tomato fruit proteins regulated by the CUTIN DEFICIENT2 transcription factor.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2081, doi. 10.1002/pmic.201500450

By:

Martin, Laetitia B. B.;
Sherwood, Robert W.;
Nicklay, Joshua J.;
Yang, Yong;
Muratore‐Schroeder, Tara L.;
Anderson, Elizabeth T.;
Thannhauser, Theodore W.;
Rose, Jocelyn K. C.;
Zhang, Sheng

Publication type:

Article

SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2238, doi. 10.1002/pmic.201500499

By:

Teo, Guoci;
Koh, Hiromi;
Fermin, Damian;
Lambert, Jean‐Philippe;
Knight, James D.R.;
Gingras, Anne‐Claude;
Choi, Hyungwon

Publication type:

Article

Targeted proteomics coming of age - SRM, PRM and DIA performance evaluated from a core facility perspective.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2183, doi. 10.1002/pmic.201500502

By:

Kockmann, Tobias;
Trachsel, Christian;
Panse, Christian;
Wahlander, Asa;
Selevsek, Nathalie;
Grossmann, Jonas;
Wolski, Witold E.;
Schlapbach, Ralph

Publication type:

Article

Parallel reaction monitoring using quadrupole-Orbitrap mass spectrometer: Principle and applications.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2146, doi. 10.1002/pmic.201500543

By:

Bourmaud, Adele;
Gallien, Sebastien;
Domon, Bruno

Publication type:

Article

Large-scale multiplex absolute protein quantification of drug-metabolizing enzymes and transporters in human intestine, liver, and kidney microsomes by SWATH-MS: Comparison with MRM/SRM and HR-MRM/PRM.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2106, doi. 10.1002/pmic.201500433

By:

Nakamura, Kenji;
Hirayama‐Kurogi, Mio;
Ito, Shingo;
Kuno, Takuya;
Yoneyama, Toshihiro;
Obuchi, Wataru;
Terasaki, Tetsuya;
Ohtsuki, Sumio

Publication type:

Article

Multiplexed data independent acquisition (MSX-DIA) applied by high resolution mass spectrometry improves quantification quality for the analysis of histone peptides.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2095, doi. 10.1002/pmic.201500527

By:

Sidoli, Simone;
Fujiwara, Rina;
Garcia, Benjamin A.

Publication type:

Article

Advances in quadrupole and time-of-flight mass spectrometry for peptide MRM based translational research analysis.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2206, doi. 10.1002/pmic.201500500

By:

Mbasu, Richard J.;
Heaney, Liam M.;
Molloy, Billy J.;
Hughes, Chris J.;
Ng, Leong L.;
Vissers, Johannes P. C.;
Langridge, James I.;
Jones, Donald J. L.

Publication type:

Article

High-precision iRT prediction in the targeted analysis of data-independent acquisition and its impact on identification and quantitation.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2246, doi. 10.1002/pmic.201500488

By:

Bruderer, Roland;
Bernhardt, Oliver M.;
Gandhi, Tejas;
Reiter, Lukas

Publication type:

Article

Assessment of SRM, MRM<sup>3</sup>, and DIA for the targeted analysis of phosphorylation dynamics in non-small cell lung cancer.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2193, doi. 10.1002/pmic.201500453

By:

Schmidlin, Thierry;
Garrigues, Luc;
Lane, Catherine S.;
Mulder, T. Celine;
Doorn, Sander;
Post, Harm;
Graaf, Erik L.;
Lemeer, Simone;
Heck, Albert J. R.;
Altelaar, A. F. Maarten

Publication type:

Article

Analytical performance of nano-LC-SRM using nondepleted human plasma over an 18-month period.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2118, doi. 10.1002/pmic.201500507

By:

Song, Xiaomin;
Amirkhani, Ardeshir;
Wu, Jemma X.;
Pascovici, Dana;
Zaw, Thiri;
Xavier, Dylan;
Clarke, Stephen J.;
Molloy, Mark P.

Publication type:

Article

Untargeted, spectral library-free analysis of data-independent acquisition proteomics data generated using Orbitrap mass spectrometers.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2257, doi. 10.1002/pmic.201500526

By:

Tsou, Chih‐Chiang;
Tsai, Chia‐Feng;
Teo, Guo Ci;
Chen, Yu‐Ju;
Nesvizhskii, Alexey I.

Publication type:

Article

Absolute protein quantification of the yeast chaperome under conditions of heat shock.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2128, doi. 10.1002/pmic.201500503

By:

Mackenzie, Rebecca J.;
Lawless, Craig;
Holman, Stephen W.;
Lanthaler, Karin;
Beynon, Robert J.;
Grant, Chris M.;
Hubbard, Simon J.;
Eyers, Claire E.

Publication type:

Article

A hybrid retention time alignment algorithm for SWATH-MS data.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2272, doi. 10.1002/pmic.201500511

By:

Wu, Long;
Amon, Sabine;
Lam, Henry

Publication type:

Article

Multi-mode acquisition (MMA): An MS/MS acquisition strategy for maximizing selectivity, specificity and sensitivity of DIA product ion spectra.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2284, doi. 10.1002/pmic.201500492

By:

Williams, Brad J.;
Ciavarini, Steve J.;
Devlin, Curt;
Cohn, Steven M.;
Xie, Rong;
Vissers, Johannes P.C.;
Martin, LeRoy B.;
Caswell, Allen;
Langridge, James I.;
Geromanos, Scott J.

Publication type:

Article

Advances in targeted proteomics and applications to biomedical research.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2160, doi. 10.1002/pmic.201500449

By:

Shi, Tujin;
Song, Ehwang;
Nie, Song;
Rodland, Karin D.;
Liu, Tao;
Qian, Wei‐Jun;
Smith, Richard D.

Publication type:

Article

Effect of peptide assay library size and composition in targeted data-independent acquisition-MS analyses.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. 2221, doi. 10.1002/pmic.201600007

By:

Parker, Sarah J.;
Venkatraman, Vidya;
Eyk, Jennifer E.

Publication type:

Article

Applications and Developments in Targeted Proteomics: From SRM to DIA/SWATH.

Published in:

2016

By:

Aebersold, Ruedi;
Bensimon, Ariel;
Collins, Ben C.;
Ludwig, Christina;
Sabido, Eduard

Publication type:

Editorial

Front cover: Large-scale multiplex absolute protein quantification of drug-metabolizing enzymes and transporters in human intestine, liver, and kidney microsomes by SWATH-MS: Comparison with MRM/SRM and HR-MRM/PRM.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. NA, doi. 10.1002/pmic.201670140

By:

Nakamura, Kenji;
Hirayama‐Kurogi, Mio;
Ito, Shingo;
Kuno, Takuya;
Yoneyama, Toshihiro;
Obuchi, Wataru;
Terasaki, Tetsuya;
Ohtsuki, Sumio

Publication type:

Article

Editorial Board: Proteomics 15-16'16.

Published in:: Proteomics, 2016, v. 16, n. 15/16, p. NA, doi. 10.1002/pmic.201670141
Publication type:: Article

Contents: Proteomics 15-16'16.

Published in:: Proteomics, 2016, v. 16, n. 15/16, p. NA, doi. 10.1002/pmic.201670142
Publication type:: Article

Errata.

Published in:: Proteomics, 2016, v. 16, n. 15/16, p. 2302, doi. 10.1002/pmic.201670143
Publication type:: Article

Inside Front Cover: Multi-mode acquisition (MMA): An MS/MS acquisition strategy for maximizing selectivity, specificity and sensitivity of DIA product ion spectra.

Published in:

Proteomics, 2016, v. 16, n. 15/16, p. NA, doi. 10.1002/pmic.201670144

By:

Williams, Brad J.;
Ciavarini, Steve J.;
Devlin, Curt;
Cohn, Steven M.;
Xie, Rong;
Vissers, Johannes P.C.;
Martin, LeRoy B.;
Caswell, Allen;
Langridge, James I.;
Geromanos, Scott J.

Publication type:

Article