Works matching IS 1553734X AND DT 2024 AND VI 20 AND IP 5
Results: 75
Modeling spatial evolution of multi-drug resistance under drug environmental gradients.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012098
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Astrocytes as a mechanism for contextually-guided network dynamics and function.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012186
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Disentangling the effects of metabolic cost and accuracy on movement speed.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012169
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Evaluating targeted COVID-19 vaccination strategies with agent-based modeling.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012128
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Estimating receptive fields of simple and complex cells in early visual cortex: A convolutional neural network model with parameterized rectification.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012127
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How well do models of visual cortex generalize to out of distribution samples?
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011145
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Temporal dynamics of short-term neural adaptation across human visual cortex.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012161
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The evolution of environmentally mediated social interactions and posthumous spite under isolation by distance.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012071
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Pairtools: From sequencing data to chromosome contacts.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012164
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Leveraging conformal prediction to annotate enzyme function space with limited false positives.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012135
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Mathematical modeling of the evolution of resistance and aggressiveness of high-grade serous ovarian cancer from patient CA-125 time series.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012073
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Clustering and visualization of single-cell RNA-seq data using path metrics.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012014
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Surprise-minimization as a solution to the structural credit assignment problem.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012175
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Estimating mutation rates under heterogeneous stress responses.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012146
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Modelling midline shift and ventricle collapse in cerebral oedema following acute ischaemic stroke.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012145
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The impact of health inequity on spatial variation of COVID-19 transmission in England.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012141
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Systematic evaluation of lecithin:Cholesterol acyltransferase binding sites in apolipoproteins via peptide based nanodiscs: Regulatory role of charged residues at positions 4 and 7.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012137
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MGDrivE 3: A decoupled vector-human framework for epidemiological simulation of mosquito genetic control tools and their surveillance.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012133
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An extension of the Walsh-Hadamard transform to calculate and model epistasis in genetic landscapes of arbitrary shape and complexity.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012132
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Dorsal and median raphe neuronal firing dynamics characterized by nonlinear measures.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012111
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Adaptive modeling and inference of higher-order coordination in neuronal assemblies: A dynamic greedy estimation approach.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011605
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Transferable deep generative modeling of intrinsically disordered protein conformations.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012144
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Learning with sparse reward in a gap junction network inspired by the insect mushroom body.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012086
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Diverse task-driven modeling of macaque V4 reveals functional specialization towards semantic tasks.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012056
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Krisp: A Python package to aid in the design of CRISPR and amplification-based diagnostic assays from whole genome sequencing data.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012139
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Versatile multiple object tracking in sparse 2D/3D videos via deformable image registration.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012075
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Artificial neural networks for model identification and parameter estimation in computational cognitive models.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012119
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Modeling oxygen transport in the brain: An efficient coarse-grid approach to capture perivascular gradients in the parenchyma.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011973
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A dose-response model for statistical analysis of chemical genetic interactions in CRISPRi screens.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011408
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Competition between physical search and a weak-to-strong transition rate-limits kinesin binding times.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012158
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A computational analysis of the role of integrins and Rho-GTPases in the emergence and disruption of apical-basal polarization in renal epithelial cells.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012140
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Ten simple rules for teaching an introduction to R.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012018
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Interpretable metric learning in comparative metagenomics: The adaptive Haar-like distance.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011543
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A multimodal Transformer Network for protein-small molecule interactions enhances predictions of kinase inhibition and enzyme-substrate relationships.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012100
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Where's Whaledo: A software toolkit for array localization of animal vocalizations.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011456
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Structural and practical identifiability of contrast transport models for DCE-MRI.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012106
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Challenges of COVID-19 Case Forecasting in the US, 2020–2021.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011200
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Real-time forecasting of COVID-19-related hospital strain in France using a non-Markovian mechanistic model.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012124
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Learning Micro-C from Hi-C with diffusion models.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012136
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Inferring fungal growth rates from optical density data.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012105
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Interpretable online network dictionary learning for inferring long-range chromatin interactions.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012095
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Nuclear export is a limiting factor in eukaryotic mRNA metabolism.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012059
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Liebig's law of the minimum in the TGF-β/SMAD pathway.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012072
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What can we learn when fitting a simple telegraph model to a complex gene expression model?
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012118
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Identification of Low-Complexity Domains by Compositional Signatures Reveals Class-Specific Frequencies and functions across the domains of life.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1011372
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Removing direct photocurrent artifacts in optogenetic connectivity mapping data via constrained matrix factorization.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012053
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Marmosets mutually compensate for differences in rhythms when coordinating vigilance.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012104
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Brain2GAN: Feature-disentangled neural encoding and decoding of visual perception in the primate brain.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012058
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Learning with filopodia and spines: Complementary strong and weak competition lead to specialized, graded, and protected receptive fields.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012110
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Data–driven modelling makes quantitative predictions regarding bacteria surface motility.
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- PLoS Computational Biology, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pcbi.1012063
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