Works matching IS 1553734X AND DT 2020 AND VI 16 AND IP 10

Results: 86

Significance of trends in gait dynamics.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007180

By:

Kozlowska, Klaudia;
Latka, Miroslaw;
West, Bruce J.

Publication type:

Article

Inferring evolutionary pathways and directed genotype networks of foodborne pathogens.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008401

By:

Cliff, Oliver M.;
McLean, Natalia;
Sintchenko, Vitali;
Fair, Kristopher M.;
Sorrell, Tania C.;
Kauffman, Stuart;
Prokopenko, Mikhail

Publication type:

Article

Model-based and phylogenetically adjusted quantification of metabolic interaction between microbial species.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007951

By:

Lam, Tony J.;
Stamboulian, Moses;
Han, Wontack;
Ye, Yuzhen

Publication type:

Article

RNA structure prediction using positive and negative evolutionary information.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008387

By:

Rivas, Elena

Publication type:

Article

Tensorpac: An open-source Python toolbox for tensor-based phase-amplitude coupling measurement in electrophysiological brain signals.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008302

By:

Combrisson, Etienne;
Nest, Timothy;
Brovelli, Andrea;
Ince, Robin A. A.;
Soto, Juan L. P.;
Guillot, Aymeric;
Jerbi, Karim

Publication type:

Article

A transcriptome-based classifier to determine molecular subtypes in medulloblastoma.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008263

By:

Rathi, Komal S.;
Arif, Sherjeel;
Koptyra, Mateusz;
Naqvi, Ammar S.;
Taylor, Deanne M.;
Storm, Phillip B.;
Resnick, Adam C.;
Rokita, Jo Lynne;
Raman, Pichai

Publication type:

Article

Membrane thinning and lateral gating are consistent features of BamA across multiple species.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008355

By:

Liu, Jinchan;
Gumbart, James C.

Publication type:

Article

Ten simple rules for women principal investigators during a pandemic.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008370

By:

Kreeger, Pamela K.;
Brock, Amy;
Gibbs, Holly C.;
Grande-Allen, K. Jane;
Huang, Alice H.;
Masters, Kristyn S.;
Rangamani, Padmini;
Reagan, Michaela R.;
Servoss, Shannon L.

Publication type:

Article

A data-driven characterisation of natural facial expressions when giving good and bad news.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008335

By:

Watson, David M.;
Brown, Ben B.;
Johnston, Alan

Publication type:

Article

Locally adaptive Bayesian birth-death model successfully detects slow and rapid rate shifts.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007999

By:

Magee, Andrew F.;
Höhna, Sebastian;
Vasylyeva, Tetyana I.;
Leaché, Adam D.;
Minin, Vladimir N.

Publication type:

Article

Improving homology modeling from low-sequence identity templates in Rosetta: A case study in GPCRs.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007597

By:

Bender, Brian Joseph;
Marlow, Brennica;
Meiler, Jens

Publication type:

Article

Differences between joint-space and musculoskeletal estimations of metabolic rate time profiles.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008280

By:

Mohammadzadeh Gonabadi, Arash;
Antonellis, Prokopios;
Malcolm, Philippe

Publication type:

Article

Iterative point set registration for aligning scRNA-seq data.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007939

By:

Alavi, Amir;
Bar-Joseph, Ziv

Publication type:

Article

A Bayesian non-parametric mixed-effects model of microbial growth curves.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008366

By:

Tonner, Peter D.;
Darnell, Cynthia L.;
Bushell, Francesca M. L.;
Lund, Peter A.;
Schmid, Amy K.;
Schmidler, Scott C.

Publication type:

Article

Exploring the sequence fitness landscape of a bridge between protein folds.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008285

By:

Tian, Pengfei;
Best, Robert B.

Publication type:

Article

Gene expression noise can promote the fixation of beneficial mutations in fluctuating environments.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007727

By:

Schmutzer, Michael;
Wagner, Andreas

Publication type:

Article

Multiscale community detection in Cytoscape.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008239

By:

Singhal, Akshat;
Cao, Song;
Churas, Christopher;
Pratt, Dexter;
Fortunato, Santo;
Zheng, Fan;
Ideker, Trey

Publication type:

Article

Protein-protein interactions in neurodegenerative diseases: A conspiracy theory.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008267

By:

Thompson, Travis B.;
Chaggar, Pavanjit;
Kuhl, Ellen;
Goriely, Alain

Publication type:

Article

Graph-theoretical formulation of the generalized epitope-based vaccine design problem.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008237

By:

Dorigatti, Emilio;
Schubert, Benjamin

Publication type:

Article

CystAnalyser: A new software tool for the automatic detection and quantification of cysts in Polycystic Kidney and Liver Disease, and other cystic disorders.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008337

By:

Cordido, Adrián;
Cernadas, Eva;
Fernández-Delgado, Manuel;
García-González, Miguel A.

Publication type:

Article

Learning gene networks underlying clinical phenotypes using SNP perturbation.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007940

By:

McCarter, Calvin;
Howrylak, Judie;
Kim, Seyoung

Publication type:

Article

LocusFocus: Web-based colocalization for the annotation and functional follow-up of GWAS.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008336

By:

Panjwani, Naim;
Wang, Fan;
Mastromatteo, Scott;
Bao, Allen;
Wang, Cheng;
He, Gengming;
Gong, Jiafen;
Rommens, Johanna M.;
Sun, Lei;
Strug, Lisa J.

Publication type:

Article

Visually guided homing of bumblebees in ambiguous situations: A behavioural and modelling study.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008272

By:

Doussot, Charlotte;
Bertrand, Olivier J. N.;
Egelhaaf, Martin

Publication type:

Article

Aggregating forecasts of multiple respiratory pathogens supports more accurate forecasting of influenza-like illness.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008301

By:

Pei, Sen;
Shaman, Jeffrey

Publication type:

Article

Ten simple rules for biologists initiating a collaboration with computer scientists.

Published in:

2020

By:

Cechova, Monika

Publication type:

Editorial

Misuse of the Michaelis–Menten rate law for protein interaction networks and its remedy.

Published in:

2020

By:

Kim, Jae Kyoung;
Tyson, John J.

Publication type:

Literature Review

Ten simple rules for organizing a data science workshop.

Published in:

2020

By:

Ponsero, Alise;
Bartelme, Ryan;
de Oliveira Almeida, Gustavo;
Bigelow, Alex;
Tuteja, Reetu;
Ellingson, Holly;
Swetnam, Tyson;
Merchant, Nirav;
Oxnam, Maliaca;
Lyons, Eric

Publication type:

Editorial

A mathematical model of flagellar gene regulation and construction in Salmonella enterica.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007689

By:

Utsey, Kiersten;
Keener, James P.

Publication type:

Article

Correction: Humans adapt their anticipatory eye movements to the volatility of visual motion properties.

Published in:: 2020
Publication type:: Correction Notice

Correction: Similarities and differences in spatial and non-spatial cognitive maps.

Published in:

2020

By:

Wu, Charley M.;
Schulz, Eric;
Garvert, Mona M.;
Meder, Björn;
Schuck, Nicolas W.

Publication type:

Correction Notice

Correction: Optimizing antibody affinity and stability by the automated design of the variable light-heavy chain interfaces.

Published in:

2020

By:

Warszawski, Shira;
Borenstein Katz, Aliza;
Lipsh, Rosalie;
Khmelnitsky, Lev;
Ben Nissan, Gili;
Javitt, Gabriel;
Dym, Orly;
Unger, Tamar;
Knop, Orli;
Albeck, Shira;
Diskin, Ron;
Fass, Deborah;
Sharon, Michal;
Fleishman, Sarel J.

Publication type:

Correction Notice

Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008212

By:

Patel, Dharmeshkumar;
Barnes, Jonathan E.;
Davies, Wayne I. L.;
Stenkamp, Deborah L.;
Patel, Jagdish Suresh

Publication type:

Article

Numerical knockouts–In silico assessment of factors predisposing to thoracic aortic aneurysms.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008273

By:

Latorre, M.;
Humphrey, J. D.

Publication type:

Article

seekCRIT: Detecting and characterizing differentially expressed circular RNAs using high-throughput sequencing data.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008338

By:

Chaabane, Mohamed;
Andreeva, Kalina;
Jae Yeon Hwang;
Tae Lim Kook;
Juw Won Park;
Cooper, Nigel G. F.

Publication type:

Article

Rapid prediction of crucial hotspot interactions for icosahedral viral capsid selfassembly by energy landscape atlasing validated by mutagenesis.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008357

By:

Ruijin Wu;
Prabhu, Rahul;
Ozkan, Aysegul;
Sitharam, Meera

Publication type:

Article

Timescales of motor memory formation in dual-adaptation.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008373

By:

Forano, Marion;
Franklin, David W.

Publication type:

Article

PyHIST: A Histological Image Segmentation Tool.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008349

By:

Muñoz-Aguirre, Manuel;
Ntasis, Vasilis F.;
Rojas, Santiago;
Guigó, Roderic

Publication type:

Article

Predicting antimicrobial resistance using conserved genes.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008319

By:

Nguyen, Marcus;
Olson, Robert;
Shukla, Maulik;
VanOeffelen, Margo;
Davis, James J.

Publication type:

Article

Fibrillarin evolution through the Tree of Life: Comparative genomics and microsynteny network analyses provide new insights into the evolutionary history of Fibrillarin.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008318

By:

Pereira-Santana, Alejandro;
Gamboa-Tuz, Samuel David;
Zhao, Tao;
Schranz, M. Eric;
Vinuesa, Pablo;
Bayona, Andrea;
Rodríguez-Zapata, Luis C.;
Castano, Enrique

Publication type:

Article

After the honeymoon, the divorce: Unexpected outcomes of disease control measures against endemic infections.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008292

By:

Hollingsworth, Brandon;
Okamoto, Kenichi W.;
Lloyd, Alun L.

Publication type:

Article

PyOIF: Computational tool for modelling of multi-cell flows in complex geometries.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008249

By:

Jančigová, Iveta;
Kovalčíková, Kristína;
Weeber, Rudolf;
Cimrák, Ivan

Publication type:

Article

BinaryCIF and CIFTools—Lightweight, efficient and extensible macromolecular data management.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008247

By:

Sehnal, David;
Bittrich, Sebastian;
Velankar, Sameer;
Koča, Jaroslav;
Svobodová, Radka;
Burley, Stephen K.;
Rose, Alexander S.

Publication type:

Article

Intuitive physical reasoning about objects' masses transfers to a visuomotor decision task consistent with Newtonian physics.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007730

By:

Neupärtl, Nils;
Tatai, Fabian;
Rothkopf, Constantin A.

Publication type:

Article

A model-based evaluation of the efficacy of COVID-19 social distancing, testing and hospital triage policies.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008388

By:

McCombs, Audrey;
Kadelka, Claus

Publication type:

Article

Reduction in social learning and increased policy uncertainty about harmful intent is associated with pre-existing paranoid beliefs: Evidence from modelling a modified serial dictator game.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008372

By:

Barnby, Joseph M.;
Bell, Vaughan;
Mehta, Mitul A.;
Moutoussis, Michael

Publication type:

Article

Optimal forgetting: Semantic compression of episodic memories.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008367

By:

Nagy, David G.;
Török, Balázs;
Orbán, Gergő

Publication type:

Article

Reward-predictive representations generalize across tasks in reinforcement learning.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008317

By:

Lehnert, Lucas;
Littman, Michael L.;
Frank, Michael J.

Publication type:

Article

Ten simple rules to colorize biological data visualization.

Published in:

2020

By:

Hattab, Georges;
Rhyne, Theresa-Marie;
Heider, Dominik

Publication type:

Editorial

Finding, visualizing, and quantifying latent structure across diverse animal vocal repertoires.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008228

By:

Sainburg, Tim;
Thielk, Marvin;
Gentner, Timothy Q.

Publication type:

Article

Systematic modelling of the development of laminar projection origins in the cerebral cortex: Interactions of spatio-temporal patterns of neurogenesis and cellular heterogeneity.

Published in:

PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007991

By:

Beul, Sarah F.;
Hilgetag, Claus C.

Publication type:

Article