Works matching IS 1553734X AND DT 2019 AND VI 15 AND IP 10

Results: 65

Delayed feedback embedded in perception-action coordination cycles results in anticipation behavior during synchronized rhythmic action: A dynamical systems approach.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007371

By:

Roman, Iran R.;
Washburn, Auriel;
Large, Edward W.;
Chafe, Chris;
Fujioka, Takako

Publication type:

Article

Systems-level network modeling of Small Cell Lung Cancer subtypes identifies master regulators and destabilizers.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007343

By:

Wooten, David J.;
Groves, Sarah M.;
Tyson, Darren R.;
Liu, Qi;
Lim, Jing S.;
Albert, Réka;
Lopez, Carlos F.;
Sage, Julien;
Quaranta, Vito

Publication type:

Article

Regulation of adenylyl cyclase 5 in striatal neurons confers the ability to detect coincident neuromodulatory signals.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007382

By:

Bruce, Neil J.;
Narzi, Daniele;
Trpevski, Daniel;
van Keulen, Siri C.;
Nair, Anu G.;
Röthlisberger, Ursula;
Wade, Rebecca C.;
Carloni, Paolo;
Hellgren Kotaleski, Jeanette

Publication type:

Article

From space to time: Spatial inhomogeneities lead to the emergence of spatiotemporal sequences in spiking neuronal networks.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007432

By:

Spreizer, Sebastian;
Aertsen, Ad;
Kumar, Arvind

Publication type:

Article

Uncovering and characterizing splice variants associated with survival in lung cancer patients.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007469

By:

West, Sean;
Kumar, Sushil;
Batra, Surinder K.;
Ali, Hesham;
Ghersi, Dario

Publication type:

Article

Bayesian inference of neuronal assemblies.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007481

By:

Diana, Giovanni;
Sainsbury, Thomas T. J.;
Meyer, Martin P.

Publication type:

Article

Ten quick tips for delivering programming lessons.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007433

By:

Wilson, Greg

Publication type:

Article

Fungal feature tracker (FFT): A tool for quantitatively characterizing the morphology and growth of filamentous fungi.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007428

By:

Vidal-Diez de Ulzurrun, Guillermo;
Huang, Tsung-Yu;
Chang, Ching-Wen;
Lin, Hung-Che;
Hsueh, Yen-Ping

Publication type:

Article

Energetics of optimal undulatory swimming organisms.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007387

By:

Tokić, Grgur;
Yue, Dick K. P.

Publication type:

Article

EAGLE: An algorithm that utilizes a small number of genomic features to predict tissue/cell type-specific enhancer-gene interactions.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007436

By:

Gao, Tianshun;
Qian, Jiang

Publication type:

Article

Evolution of the nonsense-mediated decay pathway is associated with decreased cytolytic immune infiltration.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007467

By:

Zhao, Boyang;
Pritchard, Justin R.

Publication type:

Article

Prediction of off-target specificity and cell-specific fitness of CRISPR-Cas System using attention boosted deep learning and network-based gene feature.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007480

By:

Liu, Qiao;
He, Di;
Xie, Lei

Publication type:

Article

Matrigel patterning reflects multicellular contractility.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007431

By:

Méhes, Előd;
Biri-Kovács, Beáta;
Isai, Dona G.;
Gulyás, Márton;
Nyitray, László;
Czirók, András

Publication type:

Article

Hypergraph-based connectivity measures for signaling pathway topologies.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007384

By:

Franzese, Nicholas;
Groce, Adam;
Murali, T. M.;
Ritz, Anna

Publication type:

Article

Simple models of quantitative firing phenotypes in hippocampal neurons: Comprehensive coverage of intrinsic diversity.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007462

By:

Venkadesh, Siva;
Komendantov, Alexander O.;
Wheeler, Diek W.;
Hamilton, David J.;
Ascoli, Giorgio A.

Publication type:

Article

SourceSet: A graphical model approach to identify primary genes in perturbed biological pathways.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007357

By:

Salviato, Elisa;
Djordjilović, Vera;
Chiogna, Monica;
Romualdi, Chiara

Publication type:

Article

SCMarker: Ab initio marker selection for single cell transcriptome profiling.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007445

By:

Wang, Fang;
Liang, Shaoheng;
Kumar, Tapsi;
Navin, Nicholas;
Chen, Ken

Publication type:

Article

Model-driven discovery of calcium-related protein-phosphatase inhibition in plant guard cell signaling.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007429

By:

Maheshwari, Parul;
Du, Hao;
Sheen, Jen;
Assmann, Sarah M.;
Albert, Reka

Publication type:

Article

Scar shape analysis and simulated electrical instabilities in a non-ischemic dilated cardiomyopathy patient cohort.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007421

By:

Balaban, Gabriel;
Halliday, Brian P.;
Bai, Wenjia;
Porter, Bradley;
Malvuccio, Carlotta;
Lamata, Pablo;
Rinaldi, Christopher A.;
Plank, Gernot;
Rueckert, Daniel;
Prasad, Sanjay K.;
Bishop, Martin J.

Publication type:

Article

Ancestral reconstruction of protein interaction networks.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007396

By:

Liebeskind, Benjamin J.;
Aldrich, Richard W.;
Marcotte, Edward M.

Publication type:

Article

Coding Locations Relative to One or Many Landmarks in Childhood.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007380

By:

Negen, James;
Bou Ali, Linda;
Chere, Brittney;
Roome, Hannah E.;
Park, Yeachan;
Nardini, Marko

Publication type:

Article

Epigenetic switching as a strategy for quick adaptation while attenuating biochemical noise.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007364

By:

Gómez-Schiavon, Mariana;
Buchler, Nicolas E.

Publication type:

Article

Matrix feedback enables diverse higher-order patterning of the extracellular matrix.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007251

By:

Wershof, Esther;
Park, Danielle;
Jenkins, Robert P.;
Barry, David J.;
Sahai, Erik;
Bates, Paul A.

Publication type:

Article

Seasonal influenza: Modelling approaches to capture immunity propagation.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007096

By:

Hill, Edward M.;
Petrou, Stavros;
de Lusignan, Simon;
Yonova, Ivelina;
Keeling, Matt J.

Publication type:

Article

Spectral tuning of adaptation supports coding of sensory context in auditory cortex.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007430

By:

Lopez Espejo, Mateo;
Schwartz, Zachary P.;
David, Stephen V.

Publication type:

Article

Correction: Spatiotemporal network coding of physiological mossy fiber inputs by the cerebellar granular layer.

Published in:

2019

By:

Sudhakar, Shyam Kumar;
Hong, Sungho;
Raikov, Ivan;
Publio, Rodrigo;
Lang, Claus;
Close, Thomas;
Guo, Daqing;
Negrello, Mario;
de Schutter, Erik

Publication type:

Correction Notice

The folded X-pattern is not necessarily a statistical signature of decision confidence.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007456

By:

Rausch, Manuel;
Zehetleitner, Michael

Publication type:

Article

LASSI: A lattice model for simulating phase transitions of multivalent proteins.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007028

By:

Choi, Jeong-Mo;
Dar, Furqan;
Pappu, Rohit V.

Publication type:

Article

A multi-scale coevolutionary approach to predict interactions between protein domains.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1006891

By:

Croce, Giancarlo;
Gueudré, Thomas;
Ruiz Cuevas, Maria Virginia;
Keidel, Victoria;
Figliuzzi, Matteo;
Szurmant, Hendrik;
Weigt, Martin

Publication type:

Article

Correction: Bayesian hypothesis testing and experimental design for two-photon imaging data.

Published in:

2019

By:

Rogerson, Luke E.;
Zhao, Zhijian;
Franke, Katrin;
Euler, Thomas;
Berens, Philipp

Publication type:

Correction Notice

Color improves edge classification in human vision.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007398

By:

Breuil, Camille;
Jennings, Ben J.;
Barthelmé, Simon;
Guyader, Nathalie;
Kingdom, Frederick A. A.

Publication type:

Article

Sequence specificity despite intrinsic disorder: How a disease-associated Val/Met polymorphism rearranges tertiary interactions in a long disordered protein.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007390

By:

Lohia, Ruchi;
Salari, Reza;
Brannigan, Grace

Publication type:

Article

Detecting distant-homology protein structures by aligning deep neural-network based contact maps.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007411

By:

Zheng, Wei;
Wuyun, Qiqige;
Li, Yang;
Mortuza, S. M.;
Zhang, Chengxin;
Pearce, Robin;
Ruan, Jishou;
Zhang, Yang

Publication type:

Article

Surfactant delivery in rat lungs: Comparing 3D geometrical simulation model with experimental instillation.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007408

By:

Kazemi, Alireza;
Louis, Bruno;
Isabey, Daniel;
Nieman, Gary F.;
Gatto, Louis A.;
Satalin, Joshua;
Baker, Sarah;
Grotberg, James B.;
Filoche, Marcel

Publication type:

Article

Ten simple rules to aid in achieving a vision.

Published in:

2019

By:

Bourne, Philip E.

Publication type:

Editorial

Patient Dossier: Healthcare queries over distributed resources.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007291

By:

Vazquez, Miguel;
Valencia, Alfonso

Publication type:

Article

Action potential propagation and synchronisation in myelinated axons.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007004

By:

Schmidt, Helmut;
Knösche, Thomas R.

Publication type:

Article

Computational design and interpretation of single-RNA translation experiments.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007425

By:

Aguilera, Luis U.;
Raymond, William;
Fox, Zachary R.;
May, Michael;
Djokic, Elliot;
Morisaki, Tatsuya;
Stasevich, Timothy J.;
Munsky, Brian

Publication type:

Article

A Kuramoto model of self-other integration across interpersonal synchronization strategies.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007422

By:

Heggli, Ole Adrian;
Cabral, Joana;
Konvalinka, Ivana;
Vuust, Peter;
Kringelbach, Morten L.

Publication type:

Article

Combinations of low-level and high-level neural processes account for distinct patterns of context-dependent choice.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007427

By:

Spitmaan, Mehran;
Horno, Oihane;
Chu, Emily;
Soltani, Alireza

Publication type:

Article

Evaluation of linear and non-linear activation dynamics models for insect muscle.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007437

By:

Harischandra, Nalin;
Clare, Anthony J.;
Zakotnik, Jure;
Blackburn, Laura M. L.;
Matheson, Tom;
Dürr, Volker

Publication type:

Article

Consensus and uncertainty in the geographic range of Aedes aegypti and Aedes albopictus in the contiguous United States: Multi-model assessment and synthesis.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007369

By:

Monaghan, Andrew J.;
Eisen, Rebecca J.;
Eisen, Lars;
McAllister, Janet;
Savage, Harry M.;
Mutebi, John-Paul;
Johansson, Michael A.

Publication type:

Article

Ten simple rules for providing optimal administrative support to research teams.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007292

By:

Garrido, Romina;
Trowbridge, Casandra A.;
Tamura, Nana

Publication type:

Article

Phylogenetic correlations can suffice to infer protein partners from sequences.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007179

By:

Marmier, Guillaume;
Weigt, Martin;
Bitbol, Anne-Florence

Publication type:

Article

Categorical encoding of decision variables in orbitofrontal cortex.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1006667

By:

Onken, Arno;
Xie, Jue;
Panzeri, Stefano;
Padoa-Schioppa, Camillo

Publication type:

Article

Key residues in TLR4-MD2 tetramer formation identified by free energy simulations.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007228

By:

Tafazzol, Alireza;
Duan, Yong

Publication type:

Article

Correction: A unifying Bayesian account of contextual effects in value-based choice.

Published in:: PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007366
Publication type:: Article

Evolving generalists in switching rugged landscapes.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007320

By:

Wang, Shenshen;
Dai, Lei

Publication type:

Article

Correction: A unifying Bayesian account of contextual effects in value-based choice.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007366

By:

Rigoli, Francesco;
Mathys, Christoph;
Friston, Karl J.;
Dolan, Raymond J.

Publication type:

Article

A computational account of threat-related attentional bias.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pcbi.1007341

By:

Wise, Toby;
Michely, Jochen;
Dayan, Peter;
Dolan, Raymond J.

Publication type:

Article